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The map label for this gene is araA [H]

Identifier: 154687014

GI number: 154687014

Start: 2710894

End: 2712393

Strand: Reverse

Name: araA [H]

Synonym: RBAM_025860

Alternate gene names: 154687014

Gene position: 2712393-2710894 (Counterclockwise)

Preceding gene: 154687015

Following gene: 154687013

Centisome position: 69.22

GC content: 48.93

Gene sequence:

>1500_bases
ATGAATGTGCTTCAAAACAATGAATATGAATTTTGGTTTGTAACGGGAAGCCAGCACTTATACGGAGAGGAAACGCTGCA
GCTTGTCGATAAACACGCAAAGGGAATATGTGACGGCCTCAGCGGGGTGTCATCAAGATACAAGATCAGGCATAAACCGG
TTGTCACGTCATCTGAAACGATCAGAGAGGTTTTGCGGGAAGCGCAGTATCAAGAAAACTGTGCCGGGGTCGTGACATGG
ATGCATACATTTTCCCCTGCGAAAATGTGGATTGAAGGTCTTTCCGCTTTTCAAAAGCCGATGCTTCATCTGCATACCCA
ATATCACCGCGACATCCCGTGGGAAACGATTGATATGGACTTTATGAACAGCAACCAATCCGCTCACGGAGACCGGGAAT
ACGGGTATATCCAGTCAAGAATGGGGCAGACGAGAAAAGTCATCGCAGGCTATTGGGATGATGAGGAAGTCAAACATGAC
ATTTCGCAATGGATGAACACTGCTGCCGCCTGGAATGAAAGCAGGAATATTAAAGTAGCCCGGTTCGGCGACAATATGCG
GAATGTAGCGGTTACTGACGGAGACAAAGTCGGCGCCCACATCCAATTCGGCTGGCAGGTTGACGGGTACGGAATCGGCG
ATCTTACCGAGGTGATGAACAACGTCACCGACGCAGAAATTGAGGCGCTTTATGAGGAATACGACAAATTGTATGTCATC
AGCGGCGAAACAAAACAAGATGAAGCAAAAGTTGCTTCCATTAAAGAACAGGCGAAAATTGAACTCGGATTAACGGCCTT
TCTCGAACGGGGCGGATATACAGCGTTTTCGACCTCCTTTGAAGTTTTGCACGGAATGAAGCAGCTTCCGGGACTTGCCG
TTCAGCGTCTCATGGAAAAAGGGTACGGATTTGCCGGCGAAGGCGATTGGAAAACGGCTGCCCTTGTGCGAATGATGAAA
ATAATGGCGGACGGAGAACAAACCTCCTTCATGGAAGATTATACGTACCATTTTGAACCGGGGCGTGCGATGATTCTCGG
ATCACATATGCTTGAAGTATGTCCGACGATCGCCCTTGATCAGCCGAAAATCGAAGTCCATCCTCTCTCAATCGGAGGGA
AGGAAGATCCGGCCCGGTTGGTCTTTAACGGAATCGGCGGTTCAGCCATCATCGCCAGCATCATTGATATCGGCGGGCGA
TTCCGTCTCATTCTGAATGAAGCAGAAGGCAGGGAAATTGATCATGATATGCCGAATCTCCCTGTGGCGCGGGTGCTATG
GAAGCCGGAGCCATCGCTGAAAACAGCTGCGGAAGCATGGATTTTGGCGGGAGGCGCCCATCATACTTGTATGTCTTTCC
GGCTTACGGCTGAACAGATGCTTGACTGGGCTGAGATGGCAGGCATTGAAAGCATCTTTATTTCCCGTAATACCGAAATA
CATGAGCTGAAAAAAGAGCTGAAATGGAATGACGTATTATACCGGTTGGGAGGGAATTGA

Upstream 100 bases:

>100_bases
TAAAATTGTTCGTACAAATAAAAGGATAAAAGTTTTGTGGTTTATATTCGTACGTATATTTTTTAAAAATGCAAGCGCTT
TATTTTGATGGGAAGGGGAA

Downstream 100 bases:

>100_bases
TATGGCGTATACGATTGGTGTTGATTTCGGCACATTGTCCGGCCGGGCGGTGCTTGTCAATGTCCGCACGGGCGAAGAGA
TCGCGTCTGCGGTAAAAGAA

Product: L-arabinose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MNVLQNNEYEFWFVTGSQHLYGEETLQLVDKHAKGICDGLSGVSSRYKIRHKPVVTSSETIREVLREAQYQENCAGVVTW
MHTFSPAKMWIEGLSAFQKPMLHLHTQYHRDIPWETIDMDFMNSNQSAHGDREYGYIQSRMGQTRKVIAGYWDDEEVKHD
ISQWMNTAAAWNESRNIKVARFGDNMRNVAVTDGDKVGAHIQFGWQVDGYGIGDLTEVMNNVTDAEIEALYEEYDKLYVI
SGETKQDEAKVASIKEQAKIELGLTAFLERGGYTAFSTSFEVLHGMKQLPGLAVQRLMEKGYGFAGEGDWKTAALVRMMK
IMADGEQTSFMEDYTYHFEPGRAMILGSHMLEVCPTIALDQPKIEVHPLSIGGKEDPARLVFNGIGGSAIIASIIDIGGR
FRLILNEAEGREIDHDMPNLPVARVLWKPEPSLKTAAEAWILAGGAHHTCMSFRLTAEQMLDWAEMAGIESIFISRNTEI
HELKKELKWNDVLYRLGGN

Sequences:

>Translated_499_residues
MNVLQNNEYEFWFVTGSQHLYGEETLQLVDKHAKGICDGLSGVSSRYKIRHKPVVTSSETIREVLREAQYQENCAGVVTW
MHTFSPAKMWIEGLSAFQKPMLHLHTQYHRDIPWETIDMDFMNSNQSAHGDREYGYIQSRMGQTRKVIAGYWDDEEVKHD
ISQWMNTAAAWNESRNIKVARFGDNMRNVAVTDGDKVGAHIQFGWQVDGYGIGDLTEVMNNVTDAEIEALYEEYDKLYVI
SGETKQDEAKVASIKEQAKIELGLTAFLERGGYTAFSTSFEVLHGMKQLPGLAVQRLMEKGYGFAGEGDWKTAALVRMMK
IMADGEQTSFMEDYTYHFEPGRAMILGSHMLEVCPTIALDQPKIEVHPLSIGGKEDPARLVFNGIGGSAIIASIIDIGGR
FRLILNEAEGREIDHDMPNLPVARVLWKPEPSLKTAAEAWILAGGAHHTCMSFRLTAEQMLDWAEMAGIESIFISRNTEI
HELKKELKWNDVLYRLGGN
>Mature_499_residues
MNVLQNNEYEFWFVTGSQHLYGEETLQLVDKHAKGICDGLSGVSSRYKIRHKPVVTSSETIREVLREAQYQENCAGVVTW
MHTFSPAKMWIEGLSAFQKPMLHLHTQYHRDIPWETIDMDFMNSNQSAHGDREYGYIQSRMGQTRKVIAGYWDDEEVKHD
ISQWMNTAAAWNESRNIKVARFGDNMRNVAVTDGDKVGAHIQFGWQVDGYGIGDLTEVMNNVTDAEIEALYEEYDKLYVI
SGETKQDEAKVASIKEQAKIELGLTAFLERGGYTAFSTSFEVLHGMKQLPGLAVQRLMEKGYGFAGEGDWKTAALVRMMK
IMADGEQTSFMEDYTYHFEPGRAMILGSHMLEVCPTIALDQPKIEVHPLSIGGKEDPARLVFNGIGGSAIIASIIDIGGR
FRLILNEAEGREIDHDMPNLPVARVLWKPEPSLKTAAEAWILAGGAHHTCMSFRLTAEQMLDWAEMAGIESIFISRNTEI
HELKKELKWNDVLYRLGGN

Specific function: Catalyzes the conversion of L-arabinose to L-ribulose [H]

COG id: COG2160

COG function: function code G; L-arabinose isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arabinose isomerase family [H]

Homologues:

Organism=Escherichia coli, GI1786248, Length=498, Percent_Identity=52.6104417670683, Blast_Score=558, Evalue=1e-160,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004216
- InterPro:   IPR009015
- InterPro:   IPR003762
- ProDom:   PD018364 [H]

Pfam domain/function: PF02610 Arabinose_Isome [H]

EC number: =5.3.1.4 [H]

Molecular weight: Translated: 56341; Mature: 56341

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLQNNEYEFWFVTGSQHLYGEETLQLVDKHAKGICDGLSGVSSRYKIRHKPVVTSSET
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHH
IREVLREAQYQENCAGVVTWMHTFSPAKMWIEGLSAFQKPMLHLHTQYHRDIPWETIDMD
HHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEH
FMNSNQSAHGDREYGYIQSRMGQTRKVIAGYWDDEEVKHDISQWMNTAAAWNESRNIKVA
HCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEE
RFGDNMRNVAVTDGDKVGAHIQFGWQVDGYGIGDLTEVMNNVTDAEIEALYEEYDKLYVI
EECCCCCEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCEEEEE
SGETKQDEAKVASIKEQAKIELGLTAFLERGGYTAFSTSFEVLHGMKQLPGLAVQRLMEK
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHH
GYGFAGEGDWKTAALVRMMKIMADGEQTSFMEDYTYHFEPGRAMILGSHMLEVCPTIALD
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCEEECCCCEEEEHHHHHHHCCCCCCC
QPKIEVHPLSIGGKEDPARLVFNGIGGSAIIASIIDIGGRFRLILNEAEGREIDHDMPNL
CCCEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCC
PVARVLWKPEPSLKTAAEAWILAGGAHHTCMSFRLTAEQMLDWAEMAGIESIFISRNTEI
CHHHEEECCCCCHHHHHHHHEEECCCCHHHEEEEECHHHHHHHHHHCCCCEEEEECCCHH
HELKKELKWNDVLYRLGGN
HHHHHHCCHHHHHEEECCC
>Mature Secondary Structure
MNVLQNNEYEFWFVTGSQHLYGEETLQLVDKHAKGICDGLSGVSSRYKIRHKPVVTSSET
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHH
IREVLREAQYQENCAGVVTWMHTFSPAKMWIEGLSAFQKPMLHLHTQYHRDIPWETIDMD
HHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEH
FMNSNQSAHGDREYGYIQSRMGQTRKVIAGYWDDEEVKHDISQWMNTAAAWNESRNIKVA
HCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEE
RFGDNMRNVAVTDGDKVGAHIQFGWQVDGYGIGDLTEVMNNVTDAEIEALYEEYDKLYVI
EECCCCCEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCEEEEE
SGETKQDEAKVASIKEQAKIELGLTAFLERGGYTAFSTSFEVLHGMKQLPGLAVQRLMEK
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHH
GYGFAGEGDWKTAALVRMMKIMADGEQTSFMEDYTYHFEPGRAMILGSHMLEVCPTIALD
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCEEECCCCEEEEHHHHHHHCCCCCCC
QPKIEVHPLSIGGKEDPARLVFNGIGGSAIIASIIDIGGRFRLILNEAEGREIDHDMPNL
CCCEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCC
PVARVLWKPEPSLKTAAEAWILAGGAHHTCMSFRLTAEQMLDWAEMAGIESIFISRNTEI
CHHHEEECCCCCHHHHHHHHEEECCCCHHHEEEEECHHHHHHHHHHCCCCEEEEECCCHH
HELKKELKWNDVLYRLGGN
HHHHHHCCHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9084180; 8969504; 9384377; 10417639 [H]