Click here to switch to the map view.

The map label for this gene is spoVID [H]

Identifier: 154686947

GI number: 154686947

Start: 2635477

End: 2637318

Strand: Reverse

Name: spoVID [H]

Synonym: RBAM_025170

Alternate gene names: 154686947

Gene position: 2637318-2635477 (Counterclockwise)

Preceding gene: 154686948

Following gene: 154686946

Centisome position: 67.3

GC content: 48.48

Gene sequence:

>1842_bases
TTGCCGCATAATCACCGATTGCAATTTTCTGTTGAAGAATCAATCTGTTTCCAAAAAGGACAGGAAGTTTCTGAATTACT
TTCGATTTCATTAGACCCTGACATCAGGGTGCAGGAAGTAAATGATTATGTCTCAATTAAAGGATCATTAGAACTTACTG
GCGAGTACAACATAGATCACAGCAGTCATTTTGAAGAGCTTGATAGGGAGCTGAGGCATGTAGAGGAAGTGAGGGCGAGG
GAGGATGGCACGGCCGAGCTCATTCATTGTTTCCCGGTGGACATCACGATTCCGAAAAATAAAGTGAGCCACCTCAATGA
TGTTTTCGTATTTATCGATGCCTTTGATTATCAGCTGACGGATTCAAGGATCTTAACCATTCAAGCTGATTTGGCAATTG
AAGGGCTGCTTGAGGAATCCGAGCCAAAAGAGCCGGAGATCCCTTTGTACGTGGCGCCTGAATTTGCCAGAGAAGAAATG
ATCAATCTTGCCGGACATCATTCTGAGGACGAAAACGAACCAGAATTAATGATACGCCATGAGCCTGAAATACCTTTGAC
TGTATCAGAAGAAGCAGCACAAGAAACCAAGAAGAACGAGGAAGAAATCCCGCCTTTAATCAGGCTGGAGGAAGAAGAGC
AGGAAGCAGCCCCGATTTTGAGGGAGCGGGAAGAAGAGCAGGAAACTGCCCCGATTTTGAGGGAACGGGAAGAAGAAGAG
CAGGAGACTGCCCCGATTCTGAGGGAACGGGAAGAAGAAGAGCAGGAGACTGCCCCGATTTTGAGGGAACGGGAAGAAGA
AGAGCAGGAAGCTGCCCCGATTTTGAGGGAGCACAAAGAAGAAGAGGAAGAAACTGCCCCGATTCTGAGAGAGCAGGAAG
AAGAAGAGCAGGAAGCAGCCCCGATTCTGAGGGAGCGGGAAGAAGAAGAGCAGGAAACTGCCCCGATTCTGCGGGAGCGG
AAAGAAGAAGAGCAGGAGACTGCCCCGATTCTGAGGGAGCAGGAAGAGGTGCCGAAACCTGTTTCCTTTACTGAGCCTCC
TCCTCCCGTTTCCTTCCAACACGAAGAAAAGCCGGAAGAAGCTGAGGAGCCTGCAATCATGTCGGCTGTGAGGAATGGAC
CTGTATTTGAGGATGATTCAGCAGAAGTGCAGGAAGAGCCAAAAGATGATAACGAGCCGGTTTTCCCTGCGTTCACTCTG
ACTCCGCATGCAGAAAAACCAAAAATTGCGGAACAGCCCTTCCTTCAAAAAGAAGAGCAGCCAGAGGCCGAGCCGCTTCT
CCGTCAGAGCGATCATGAGGCGGCAGAAGACGAAGATGAGCCTGCGGTTTTTCAAGAAGAGCAGGCGCCCGTTTATCGCG
AGTTCGTTCCGGAACAGCAGGAAGAGGAGTTTTACAGCGCTCCTAAGCTGCTTGAAGAAGAGGCTCAGGATGAAGTAGGG
TTCGAAATTGAGGTAAGGAAGATGGCGCCGCCGGAGGAGGAAACCGGGAAGCCTCTCGATTTGTCTTTTCAGTTTTCCAA
ACTGCCGCCTGAGGAGCCGGCGCAAGCTGAACAGCCTGAGCCGCTTAAGCCTGAAAGAAAGAATGAAGAAGCGGCACCGG
GAACCGAGCAGAAGGAAAATGACAACTCTCATTACTTGACAAAATTATTTACAAGGGAAGAAGAAAAGTTTTCAAGAATG
AAAATTTGTATCGTACAGCAGCAAGATACTATCGACCGGGTGTGTGAACGATATGACATAACATCCCAGCAGCTCATCAG
AACGAATGCTTTATCGTTTGATGACGAGCTTGAAGAAGGTCAGCTTCTGTATATACCTGAATATAATAACAGCCATGCGT
AA

Upstream 100 bases:

>100_bases
CGGCTTTTTTCAATGCCTCCATTATCATATTTTTCCGGATTGCGGCATACACCTTTAGTGACATCTAATTGTATGGATTA
GATGAAAGGAGGATATGAAC

Downstream 100 bases:

>100_bases
GCACAAAGAGGCCGTAAAAATGTGGTGAATGGAATGGAAGCAGTCCAATCAGTGCTTCAGGAATACGGGCTGGCGGCTGA
GTATATTGAGCCTGTCAGCC

Product: SpoVID

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 613; Mature: 612

Protein sequence:

>613_residues
MPHNHRLQFSVEESICFQKGQEVSELLSISLDPDIRVQEVNDYVSIKGSLELTGEYNIDHSSHFEELDRELRHVEEVRAR
EDGTAELIHCFPVDITIPKNKVSHLNDVFVFIDAFDYQLTDSRILTIQADLAIEGLLEESEPKEPEIPLYVAPEFAREEM
INLAGHHSEDENEPELMIRHEPEIPLTVSEEAAQETKKNEEEIPPLIRLEEEEQEAAPILREREEEQETAPILREREEEE
QETAPILREREEEEQETAPILREREEEEQEAAPILREHKEEEEETAPILREQEEEEQEAAPILREREEEEQETAPILRER
KEEEQETAPILREQEEVPKPVSFTEPPPPVSFQHEEKPEEAEEPAIMSAVRNGPVFEDDSAEVQEEPKDDNEPVFPAFTL
TPHAEKPKIAEQPFLQKEEQPEAEPLLRQSDHEAAEDEDEPAVFQEEQAPVYREFVPEQQEEEFYSAPKLLEEEAQDEVG
FEIEVRKMAPPEEETGKPLDLSFQFSKLPPEEPAQAEQPEPLKPERKNEEAAPGTEQKENDNSHYLTKLFTREEEKFSRM
KICIVQQQDTIDRVCERYDITSQQLIRTNALSFDDELEEGQLLYIPEYNNSHA

Sequences:

>Translated_613_residues
MPHNHRLQFSVEESICFQKGQEVSELLSISLDPDIRVQEVNDYVSIKGSLELTGEYNIDHSSHFEELDRELRHVEEVRAR
EDGTAELIHCFPVDITIPKNKVSHLNDVFVFIDAFDYQLTDSRILTIQADLAIEGLLEESEPKEPEIPLYVAPEFAREEM
INLAGHHSEDENEPELMIRHEPEIPLTVSEEAAQETKKNEEEIPPLIRLEEEEQEAAPILREREEEQETAPILREREEEE
QETAPILREREEEEQETAPILREREEEEQEAAPILREHKEEEEETAPILREQEEEEQEAAPILREREEEEQETAPILRER
KEEEQETAPILREQEEVPKPVSFTEPPPPVSFQHEEKPEEAEEPAIMSAVRNGPVFEDDSAEVQEEPKDDNEPVFPAFTL
TPHAEKPKIAEQPFLQKEEQPEAEPLLRQSDHEAAEDEDEPAVFQEEQAPVYREFVPEQQEEEFYSAPKLLEEEAQDEVG
FEIEVRKMAPPEEETGKPLDLSFQFSKLPPEEPAQAEQPEPLKPERKNEEAAPGTEQKENDNSHYLTKLFTREEEKFSRM
KICIVQQQDTIDRVCERYDITSQQLIRTNALSFDDELEEGQLLYIPEYNNSHA
>Mature_612_residues
PHNHRLQFSVEESICFQKGQEVSELLSISLDPDIRVQEVNDYVSIKGSLELTGEYNIDHSSHFEELDRELRHVEEVRARE
DGTAELIHCFPVDITIPKNKVSHLNDVFVFIDAFDYQLTDSRILTIQADLAIEGLLEESEPKEPEIPLYVAPEFAREEMI
NLAGHHSEDENEPELMIRHEPEIPLTVSEEAAQETKKNEEEIPPLIRLEEEEQEAAPILREREEEQETAPILREREEEEQ
ETAPILREREEEEQETAPILREREEEEQEAAPILREHKEEEEETAPILREQEEEEQEAAPILREREEEEQETAPILRERK
EEEQETAPILREQEEVPKPVSFTEPPPPVSFQHEEKPEEAEEPAIMSAVRNGPVFEDDSAEVQEEPKDDNEPVFPAFTLT
PHAEKPKIAEQPFLQKEEQPEAEPLLRQSDHEAAEDEDEPAVFQEEQAPVYREFVPEQQEEEFYSAPKLLEEEAQDEVGF
EIEVRKMAPPEEETGKPLDLSFQFSKLPPEEPAQAEQPEPLKPERKNEEAAPGTEQKENDNSHYLTKLFTREEEKFSRMK
ICIVQQQDTIDRVCERYDITSQQLIRTNALSFDDELEEGQLLYIPEYNNSHA

Specific function: Required for assembly of a normal spore coat. May be a component of the innermost layer of the spore coat that aids in its adherence to the prespore [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR014256 [H]

Pfam domain/function: PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 71284; Mature: 71152

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHNHRLQFSVEESICFQKGQEVSELLSISLDPDIRVQEVNDYVSIKGSLELTGEYNIDH
CCCCCEEEEEHHHHHHHHCCHHHHHHHHCCCCCCCEEEECCCEEEEECCEEEEEEECCCC
SSHFEELDRELRHVEEVRAREDGTAELIHCFPVDITIPKNKVSHLNDVFVFIDAFDYQLT
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCHHHHHHCEEEEEEEECCEEEC
DSRILTIQADLAIEGLLEESEPKEPEIPLYVAPEFAREEMINLAGHHSEDENEPELMIRH
CCEEEEEEECHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEE
EPEIPLTVSEEAAQETKKNEEEIPPLIRLEEEEQEAAPILREREEEQETAPILREREEEE
CCCCCEEECHHHHHHHHCCHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QETAPILREREEEEQETAPILREREEEEQEAAPILREHKEEEEETAPILREQEEEEQEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PILREREEEEQETAPILRERKEEEQETAPILREQEEVPKPVSFTEPPPPVSFQHEEKPEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
AEEPAIMSAVRNGPVFEDDSAEVQEEPKDDNEPVFPAFTLTPHAEKPKIAEQPFLQKEEQ
HCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
PEAEPLLRQSDHEAAEDEDEPAVFQEEQAPVYREFVPEQQEEEFYSAPKLLEEEAQDEVG
CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
FEIEVRKMAPPEEETGKPLDLSFQFSKLPPEEPAQAEQPEPLKPERKNEEAAPGTEQKEN
CEEEEECCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DNSHYLTKLFTREEEKFSRMKICIVQQQDTIDRVCERYDITSQQLIRTNALSFDDELEEG
CCCHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
QLLYIPEYNNSHA
CEEEEECCCCCCC
>Mature Secondary Structure 
PHNHRLQFSVEESICFQKGQEVSELLSISLDPDIRVQEVNDYVSIKGSLELTGEYNIDH
CCCCEEEEEHHHHHHHHCCHHHHHHHHCCCCCCCEEEECCCEEEEECCEEEEEEECCCC
SSHFEELDRELRHVEEVRAREDGTAELIHCFPVDITIPKNKVSHLNDVFVFIDAFDYQLT
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCHHHHHHCEEEEEEEECCEEEC
DSRILTIQADLAIEGLLEESEPKEPEIPLYVAPEFAREEMINLAGHHSEDENEPELMIRH
CCEEEEEEECHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEE
EPEIPLTVSEEAAQETKKNEEEIPPLIRLEEEEQEAAPILREREEEQETAPILREREEEE
CCCCCEEECHHHHHHHHCCHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QETAPILREREEEEQETAPILREREEEEQEAAPILREHKEEEEETAPILREQEEEEQEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PILREREEEEQETAPILRERKEEEQETAPILREQEEVPKPVSFTEPPPPVSFQHEEKPEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
AEEPAIMSAVRNGPVFEDDSAEVQEEPKDDNEPVFPAFTLTPHAEKPKIAEQPFLQKEEQ
HCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
PEAEPLLRQSDHEAAEDEDEPAVFQEEQAPVYREFVPEQQEEEFYSAPKLLEEEAQDEVG
CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
FEIEVRKMAPPEEETGKPLDLSFQFSKLPPEEPAQAEQPEPLKPERKNEEAAPGTEQKEN
CEEEEECCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DNSHYLTKLFTREEEKFSRMKICIVQQQDTIDRVCERYDITSQQLIRTNALSFDDELEEG
CCCHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
QLLYIPEYNNSHA
CEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8449878; 9384377 [H]