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The map label for this gene is yrvC [H]

Identifier: 154686905

GI number: 154686905

Start: 2596898

End: 2597395

Strand: Reverse

Name: yrvC [H]

Synonym: RBAM_024750

Alternate gene names: 154686905

Gene position: 2597395-2596898 (Counterclockwise)

Preceding gene: 154686906

Following gene: 154686904

Centisome position: 66.28

GC content: 46.79

Gene sequence:

>498_bases
ATGAACGTTCGTGAGTCGGAGCTTCCGGGCATCGGACAGAAAGTAGAAGTCATTACGAAAAATCACGATAAAATCAGTAT
TATTCTTCATGATGACGGCAGAAAAGAGCTCTATTACTTCGATGAGAATGATCATGACGAATGCTTGGCATCCGTTGAAT
TTAACGACGAAGAGGCGAGGCAGATTTCCGCAATTTTAGGCGGGATGACGTATAAGCCGAAAGCGCTGGAATCTGTGGAA
GTCGCGCTTGATGACCTCGTCATTGAGTGGTTTAAAGCCGAATCTCATGCACCGGCTGTCAGCCGTACAATCGGAGATTT
GGAGATCAAGAAACATTACAACGTCCAGATTATTGCGATCGTAAAGAAAAACCGGCAAAAACAGCTGAGCCCCGGCATTG
ATACCGTAATTGAAGAAGGGGACACCCTCGTCATATCGGGAGAAAGAAGCGGACTGAAAAAGCTGGTCCGCGAGCAATTA
ACGGCCCGGATTTCCTGA

Upstream 100 bases:

>100_bases
CTGTTTTTTTAGGCCGCATTGAACTTAAAACCTGCATTTGCTATAATGACATACGCTTACATAATCAATCATCATTGTAA
AAACATGTAGGAGGGTTCTT

Downstream 100 bases:

>100_bases
GACCGGGGTTTACTCCCGGGAAAATGGGGGAAAAGATAAGAATGAACAATTGGGGGCAGACGCATGAATAAACAATGGAC
TATTATATTCGCTTTACTAT

Product: YrvC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MNVRESELPGIGQKVEVITKNHDKISIILHDDGRKELYYFDENDHDECLASVEFNDEEARQISAILGGMTYKPKALESVE
VALDDLVIEWFKAESHAPAVSRTIGDLEIKKHYNVQIIAIVKKNRQKQLSPGIDTVIEEGDTLVISGERSGLKKLVREQL
TARIS

Sequences:

>Translated_165_residues
MNVRESELPGIGQKVEVITKNHDKISIILHDDGRKELYYFDENDHDECLASVEFNDEEARQISAILGGMTYKPKALESVE
VALDDLVIEWFKAESHAPAVSRTIGDLEIKKHYNVQIIAIVKKNRQKQLSPGIDTVIEEGDTLVISGERSGLKKLVREQL
TARIS
>Mature_165_residues
MNVRESELPGIGQKVEVITKNHDKISIILHDDGRKELYYFDENDHDECLASVEFNDEEARQISAILGGMTYKPKALESVE
VALDDLVIEWFKAESHAPAVSRTIGDLEIKKHYNVQIIAIVKKNRQKQLSPGIDTVIEEGDTLVISGERSGLKKLVREQL
TARIS

Specific function: Unknown

COG id: COG0490

COG function: function code P; Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK C-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006037 [H]

Pfam domain/function: PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 18583; Mature: 18583

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVRESELPGIGQKVEVITKNHDKISIILHDDGRKELYYFDENDHDECLASVEFNDEEAR
CCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCCHHHEEEEEECCHHHHH
QISAILGGMTYKPKALESVEVALDDLVIEWFKAESHAPAVSRTIGDLEIKKHYNVQIIAI
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECCCEEEEEE
VKKNRQKQLSPGIDTVIEEGDTLVISGERSGLKKLVREQLTARIS
EECCCCCCCCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNVRESELPGIGQKVEVITKNHDKISIILHDDGRKELYYFDENDHDECLASVEFNDEEAR
CCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCCHHHEEEEEECCHHHHH
QISAILGGMTYKPKALESVEVALDDLVIEWFKAESHAPAVSRTIGDLEIKKHYNVQIIAI
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECCCEEEEEE
VKKNRQKQLSPGIDTVIEEGDTLVISGERSGLKKLVREQLTARIS
EECCCCCCCCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]