Click here to switch to the map view.

The map label for this gene is yrrT

Identifier: 154686868

GI number: 154686868

Start: 2558440

End: 2559081

Strand: Reverse

Name: yrrT

Synonym: RBAM_024380

Alternate gene names: 154686868

Gene position: 2559081-2558440 (Counterclockwise)

Preceding gene: 154686870

Following gene: 154686867

Centisome position: 65.31

GC content: 44.08

Gene sequence:

>642_bases
ATGGGCCGTGAATTTATTCCTTTATTTGAAGATTGGGCAGCGACTTATGATGCCACAGTGCACGGGGCTGACAAACAATA
TGCCGCTGTTTTTAAAGGATATGACAACATTCTTGACAGCATTGTCGCACTTTCAGGTTCAAACGTTTTAGAGTTCGGAC
CGGGAACGGGGAATTTAACGGCGAAATTAGCCGCTGCGAACAAAAAGGTGTTTGGTGTAGAACCGTCTCCGTCAATGAGA
AAACTGGCGGCTGACAAGCTTTCTGACAAAGCCGTGTTCAGTGACGGAGATTTTCTGGAGTTTCCCGCTCCGCCTTTTCA
AATAGATACCATCGTCAGCTCGTACGCCTTTCATCATTTAACCGATGAAGAAAAGCGAACGGCTGTAAAGCAGTATGGCG
CAATCCTTCAGAAGCATGATAAAATAGTGTTTGCCGATACAGTCTTTAAAGATCATGAAGCTTATGATGAAGCCATTAAA
AAAGCAATCCGAAACGGCTATCATCAATTAGCGGACGATTTAAAGACGGAACATTATCCGACACTCGGGACAATGAAAAA
CATCTTTTCAGAAGAGGGATTTGCCGCGCGGTTTACGCAGCAAAATGACTTTGTCTGGATAATGGAGGCGATTAAACGGT
AA

Upstream 100 bases:

>100_bases
TTTAGTACCCTTCCATTCTTTTTTGTGATAGGATAGGAACTGTTCCACGATTAATCCATACTATACTCATAGGAATTATA
AAATATGGAGAGTGAAAAAT

Downstream 100 bases:

>100_bases
ATCGAAGGGATTGTGTATAAATGAAACTGGCAGTCATCGGAGCAATGGAAGAGGAAGTTACGATTTTAAGAAGCAAACTG
AAAGACGCAAAACAAGAGAT

Product: YrrT

Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MGREFIPLFEDWAATYDATVHGADKQYAAVFKGYDNILDSIVALSGSNVLEFGPGTGNLTAKLAAANKKVFGVEPSPSMR
KLAADKLSDKAVFSDGDFLEFPAPPFQIDTIVSSYAFHHLTDEEKRTAVKQYGAILQKHDKIVFADTVFKDHEAYDEAIK
KAIRNGYHQLADDLKTEHYPTLGTMKNIFSEEGFAARFTQQNDFVWIMEAIKR

Sequences:

>Translated_213_residues
MGREFIPLFEDWAATYDATVHGADKQYAAVFKGYDNILDSIVALSGSNVLEFGPGTGNLTAKLAAANKKVFGVEPSPSMR
KLAADKLSDKAVFSDGDFLEFPAPPFQIDTIVSSYAFHHLTDEEKRTAVKQYGAILQKHDKIVFADTVFKDHEAYDEAIK
KAIRNGYHQLADDLKTEHYPTLGTMKNIFSEEGFAARFTQQNDFVWIMEAIKR
>Mature_212_residues
GREFIPLFEDWAATYDATVHGADKQYAAVFKGYDNILDSIVALSGSNVLEFGPGTGNLTAKLAAANKKVFGVEPSPSMRK
LAADKLSDKAVFSDGDFLEFPAPPFQIDTIVSSYAFHHLTDEEKRTAVKQYGAILQKHDKIVFADTVFKDHEAYDEAIKK
AIRNGYHQLADDLKTEHYPTLGTMKNIFSEEGFAARFTQQNDFVWIMEAIKR

Specific function: Could be a S-adenosyl-L-methionine-dependent methyltransferase

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. YrrT family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2438_BACA2 (A7Z722)

Other databases:

- EMBL:   CP000560
- RefSeq:   YP_001422029.1
- ProteinModelPortal:   A7Z722
- STRING:   A7Z722
- EnsemblBacteria:   EBBACT00000005772
- GeneID:   5462153
- GenomeReviews:   CP000560_GR
- KEGG:   bay:RBAM_024380
- eggNOG:   COG0500
- GeneTree:   EBGT00050000000526
- HOGENOM:   HBG417528
- OMA:   FHHLTDE
- ProtClustDB:   CLSK887660
- BioCyc:   BAMY326423:RBAM_024380-MONOMER
- HAMAP:   MF_02100
- InterPro:   IPR013216
- InterPro:   IPR001737
- PANTHER:   PTHR11727

Pfam domain/function: PF08241 Methyltransf_11

EC number: 2.1.1.- [C]

Molecular weight: Translated: 23808; Mature: 23677

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: BINDING 53-53 BINDING 74-74 BINDING 97-97

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGREFIPLFEDWAATYDATVHGADKQYAAVFKGYDNILDSIVALSGSNVLEFGPGTGNLT
CCCCCCCHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEE
AKLAAANKKVFGVEPSPSMRKLAADKLSDKAVFSDGDFLEFPAPPFQIDTIVSSYAFHHL
EEEEECCCEEECCCCCCHHHHHHHHHHCCCEEECCCCEEECCCCCCHHHHHHHHHHHHHC
TDEEKRTAVKQYGAILQKHDKIVFADTVFKDHEAYDEAIKKAIRNGYHQLADDLKTEHYP
CCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TLGTMKNIFSEEGFAARFTQQNDFVWIMEAIKR
CHHHHHHHHHCCCCEEEECCCCCEEHHHHHHCC
>Mature Secondary Structure 
GREFIPLFEDWAATYDATVHGADKQYAAVFKGYDNILDSIVALSGSNVLEFGPGTGNLT
CCCCCCHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEE
AKLAAANKKVFGVEPSPSMRKLAADKLSDKAVFSDGDFLEFPAPPFQIDTIVSSYAFHHL
EEEEECCCEEECCCCCCHHHHHHHHHHCCCEEECCCCEEECCCCCCHHHHHHHHHHHHHC
TDEEKRTAVKQYGAILQKHDKIVFADTVFKDHEAYDEAIKKAIRNGYHQLADDLKTEHYP
CCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TLGTMKNIFSEEGFAARFTQQNDFVWIMEAIKR
CHHHHHHHHHCCCCEEEECCCCCEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]

Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA