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The map label for this gene is yqfD [H]

Identifier: 154686795

GI number: 154686795

Start: 2484974

End: 2486158

Strand: Reverse

Name: yqfD [H]

Synonym: RBAM_023650

Alternate gene names: 154686795

Gene position: 2486158-2484974 (Counterclockwise)

Preceding gene: 154686796

Following gene: 154686794

Centisome position: 63.45

GC content: 42.78

Gene sequence:

>1185_bases
GTGAAAAACAAATGGCTGTCATTTTTTTCGGGTAAAGTCCAAGTGGAAGTCAAAGGAAAAGGGATTGAACGGCTGCTGAA
TGAATGTACGAGAAACGGAATCGCCATCTTTGCGGTGAAAAAAAAGCAAGACTGTGTTCTGCTGATGATTCAGCTTCAAG
ATGTACATGCTTTCAGAAGAGTCATCAGAAAACATGAATGCAAAGCAAGCTTTACAAAAAGAAAGGGTCTTCCCTTTCTG
CTTCTCAAATCAAAATTAAATCTGGGCTTCACTGCGGGATTTGTGATATTTTTTGTTATATTGTTTCTTTTGTCCAACAT
GATTTGGGAAATTGATATTAAAGGGGCCAAGCCCGAAACCGAGCATCAGATGGTAAAGCACCTTGAAGAAATCGGTGTGA
AAAAAGGCCGTTTGCAATTTTTAATGATGACGCCGGAGAAAATTCAAAAATCATTAACAAACGGCATCGATAATATTACG
TGGGTCGGTGTGGAATTGAACGGGACAGCCCTTCATATGAAAGTGGTCGAAAAGAACGAACCGACAAAAGAAAAGTACGT
AAGCCCCCGCCATATCGTTGCCAAAAAGAAGGCGGTCATCAAAAGGATGTTCGTGCAAAAGGGGCAGCCGATGGCTTTTG
TGAACGATCATGTTGACAAAGGACAGCTCCTCGTCTCAGGACTGATCGGAAATGAAGACCGGAAAGTCGCCTCAAAAGCG
GAAATTTACGGAGAAACATGGTACAAGTCAGAAGTAACCGTGCCCCTTGAAACATCATTTACGCTATATACGGGTAAAGT
AAGGACGAAGCACAAGCTGTCTTTCGGATCATGGGGCGTGCCTTTTTGGGGCTTCGGGTTTAATGAGGAGCCGCTGAAAC
ATCCGAAAACAGAGGAAGAAAAGCATCCGTTTCAATTTCTGGGGATGAAGCTTCCGGTTTCTTACGTTTCAGAACAGACA
AGAGAAAGTGAAACATCCGTGCGGACTTATACGAAAGGCGAAGCGGTTCAGGCCGGTATCAAAATGGGAAGACAAGATGT
AGAAAAGCGATTAAACGGCAGCGGAGAGGTGGAAAGTGAAAAAGTTTTGCACCAATCCGTTGAGAATGGTAAAGTAAAGT
TGATTATTCTCTACCAAGTTATAGAAGATATCGTTCAAACCACACCTATTGTTCAGGGAGACTAA

Upstream 100 bases:

>100_bases
AAAACTTGGTCATTAAGGCAATCCTTCCTGAGGAAATCCTTTTGGAAGGCACGATAGATCACGTACGATATGTCGATTCA
TAAAGCCGGGGGGAAATAAT

Downstream 100 bases:

>100_bases
AGAATGGCAGAACATTTACTTGCGATTAATCACAAACTGAAAAGCCCGGACGAAGCACTTTCTTTGTTCGGCAGCCAAGA
TGCCTTTTTACATTTAATGG

Product: YqfD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MKNKWLSFFSGKVQVEVKGKGIERLLNECTRNGIAIFAVKKKQDCVLLMIQLQDVHAFRRVIRKHECKASFTKRKGLPFL
LLKSKLNLGFTAGFVIFFVILFLLSNMIWEIDIKGAKPETEHQMVKHLEEIGVKKGRLQFLMMTPEKIQKSLTNGIDNIT
WVGVELNGTALHMKVVEKNEPTKEKYVSPRHIVAKKKAVIKRMFVQKGQPMAFVNDHVDKGQLLVSGLIGNEDRKVASKA
EIYGETWYKSEVTVPLETSFTLYTGKVRTKHKLSFGSWGVPFWGFGFNEEPLKHPKTEEEKHPFQFLGMKLPVSYVSEQT
RESETSVRTYTKGEAVQAGIKMGRQDVEKRLNGSGEVESEKVLHQSVENGKVKLIILYQVIEDIVQTTPIVQGD

Sequences:

>Translated_394_residues
MKNKWLSFFSGKVQVEVKGKGIERLLNECTRNGIAIFAVKKKQDCVLLMIQLQDVHAFRRVIRKHECKASFTKRKGLPFL
LLKSKLNLGFTAGFVIFFVILFLLSNMIWEIDIKGAKPETEHQMVKHLEEIGVKKGRLQFLMMTPEKIQKSLTNGIDNIT
WVGVELNGTALHMKVVEKNEPTKEKYVSPRHIVAKKKAVIKRMFVQKGQPMAFVNDHVDKGQLLVSGLIGNEDRKVASKA
EIYGETWYKSEVTVPLETSFTLYTGKVRTKHKLSFGSWGVPFWGFGFNEEPLKHPKTEEEKHPFQFLGMKLPVSYVSEQT
RESETSVRTYTKGEAVQAGIKMGRQDVEKRLNGSGEVESEKVLHQSVENGKVKLIILYQVIEDIVQTTPIVQGD
>Mature_394_residues
MKNKWLSFFSGKVQVEVKGKGIERLLNECTRNGIAIFAVKKKQDCVLLMIQLQDVHAFRRVIRKHECKASFTKRKGLPFL
LLKSKLNLGFTAGFVIFFVILFLLSNMIWEIDIKGAKPETEHQMVKHLEEIGVKKGRLQFLMMTPEKIQKSLTNGIDNIT
WVGVELNGTALHMKVVEKNEPTKEKYVSPRHIVAKKKAVIKRMFVQKGQPMAFVNDHVDKGQLLVSGLIGNEDRKVASKA
EIYGETWYKSEVTVPLETSFTLYTGKVRTKHKLSFGSWGVPFWGFGFNEEPLKHPKTEEEKHPFQFLGMKLPVSYVSEQT
RESETSVRTYTKGEAVQAGIKMGRQDVEKRLNGSGEVESEKVLHQSVENGKVKLIILYQVIEDIVQTTPIVQGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.megaterium spoIV [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010690 [H]

Pfam domain/function: PF06898 YqfD [H]

EC number: NA

Molecular weight: Translated: 44863; Mature: 44863

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKWLSFFSGKVQVEVKGKGIERLLNECTRNGIAIFAVKKKQDCVLLMIQLQDVHAFRR
CCCCCEEEECCEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCEEEEEEEHHHHHHHHH
VIRKHECKASFTKRKGLPFLLLKSKLNLGFTAGFVIFFVILFLLSNMIWEIDIKGAKPET
HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCH
EHQMVKHLEEIGVKKGRLQFLMMTPEKIQKSLTNGIDNITWVGVELNGTALHMKVVEKNE
HHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCC
PTKEKYVSPRHIVAKKKAVIKRMFVQKGQPMAFVNDHVDKGQLLVSGLIGNEDRKVASKA
CCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHH
EIYGETWYKSEVTVPLETSFTLYTGKVRTKHKLSFGSWGVPFWGFGFNEEPLKHPKTEEE
HHHCCCEECCEEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
KHPFQFLGMKLPVSYVSEQTRESETSVRTYTKGEAVQAGIKMGRQDVEKRLNGSGEVESE
CCCHHHHCCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCHHHHHHHCCCCCCCHHH
KVLHQSVENGKVKLIILYQVIEDIVQTTPIVQGD
HHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKNKWLSFFSGKVQVEVKGKGIERLLNECTRNGIAIFAVKKKQDCVLLMIQLQDVHAFRR
CCCCCEEEECCEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCEEEEEEEHHHHHHHHH
VIRKHECKASFTKRKGLPFLLLKSKLNLGFTAGFVIFFVILFLLSNMIWEIDIKGAKPET
HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCH
EHQMVKHLEEIGVKKGRLQFLMMTPEKIQKSLTNGIDNITWVGVELNGTALHMKVVEKNE
HHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCC
PTKEKYVSPRHIVAKKKAVIKRMFVQKGQPMAFVNDHVDKGQLLVSGLIGNEDRKVASKA
CCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHH
EIYGETWYKSEVTVPLETSFTLYTGKVRTKHKLSFGSWGVPFWGFGFNEEPLKHPKTEEE
HHHCCCEECCEEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
KHPFQFLGMKLPVSYVSEQTRESETSVRTYTKGEAVQAGIKMGRQDVEKRLNGSGEVESE
CCCHHHHCCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCHHHHHHHCCCCCCCHHH
KVLHQSVENGKVKLIILYQVIEDIVQTTPIVQGD
HHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]