| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is zur [H]
Identifier: 154686771
GI number: 154686771
Start: 2461092
End: 2461502
Strand: Reverse
Name: zur [H]
Synonym: RBAM_023410
Alternate gene names: 154686771
Gene position: 2461502-2461092 (Counterclockwise)
Preceding gene: 154686772
Following gene: 154686769
Centisome position: 62.82
GC content: 42.58
Gene sequence:
>411_bases ATGAACGTACAAGAAGCGTTGAACCTGCTGAAAGAAAAAGGGTATAAATATACGAGTAAGCGAGAAGACATGCTGCAGCT TTTTGCTGATTCTGATAAATATCTGACCGCCAAAAACGTGCTTGCCGCATTAAATGACGACTATCCGGGTCTGAGCTTTG ATACCATATACAGAAATCTTTCGTTATATGAAGAACTCGGCATTTTGGAAACGACGGAGCTTTCCGGAGAAAAACTGTTC CGTTTTACATGCTCTTATACCCATCATCATCACCATTTTATCTGTTTAACCTGCGGGAAAACGAAGGAAATTGAGTCCTG TCCGATGGATAAGCTGCACGATGATTTGGAAGGGTATGAAATCAGCGGCCATAAGTTTGAAATTTACGGCACCTGTCCGG CGTGCCGATAA
Upstream 100 bases:
>100_bases TTATAGGTATAATTTGATACATCATAAGAAAATGGCCTGCTGTTCAGACAGCTGCCATTTTCTTTTTGGAGCGATACCGT GTTGTAAAGGGGAGGTCCTC
Downstream 100 bases:
>100_bases AAAACCTCCTGCTTATACAGGAGGTTTTTTTCAGCTTTTGACATGCTGAAAGCTATGTTTGTTTTTATTAATCCAGGCGA CGGCTTCAAGCCAATTCTGC
Product: Zur
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MNVQEALNLLKEKGYKYTSKREDMLQLFADSDKYLTAKNVLAALNDDYPGLSFDTIYRNLSLYEELGILETTELSGEKLF RFTCSYTHHHHHFICLTCGKTKEIESCPMDKLHDDLEGYEISGHKFEIYGTCPACR
Sequences:
>Translated_136_residues MNVQEALNLLKEKGYKYTSKREDMLQLFADSDKYLTAKNVLAALNDDYPGLSFDTIYRNLSLYEELGILETTELSGEKLF RFTCSYTHHHHHFICLTCGKTKEIESCPMDKLHDDLEGYEISGHKFEIYGTCPACR >Mature_136_residues MNVQEALNLLKEKGYKYTSKREDMLQLFADSDKYLTAKNVLAALNDDYPGLSFDTIYRNLSLYEELGILETTELSGEKLF RFTCSYTHHHHHFICLTCGKTKEIESCPMDKLHDDLEGYEISGHKFEIYGTCPACR
Specific function: Required for the zinc-specific repression of two operons implicated in zinc uptake, yciC and ycdHIyceA. Also represses the expression of rpmE2, the gene for ribosomal protein L31B, which is expressed only after the end of exponential growth [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 15714; Mature: 15714
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVQEALNLLKEKGYKYTSKREDMLQLFADSDKYLTAKNVLAALNDDYPGLSFDTIYRNL CCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHH SLYEELGILETTELSGEKLFRFTCSYTHHHHHFICLTCGKTKEIESCPMDKLHDDLEGYE HHHHHCCCEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCEE ISGHKFEIYGTCPACR ECCCEEEEEECCCCCC >Mature Secondary Structure MNVQEALNLLKEKGYKYTSKREDMLQLFADSDKYLTAKNVLAALNDDYPGLSFDTIYRNL CCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHH SLYEELGILETTELSGEKLFRFTCSYTHHHHHFICLTCGKTKEIESCPMDKLHDDLEGYE HHHHHCCCEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCEE ISGHKFEIYGTCPACR ECCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9811636 [H]