Definition Bacillus amyloliquefaciens FZB42, complete genome.
Accession NC_009725
Length 3,918,589

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The map label for this gene is zur [H]

Identifier: 154686771

GI number: 154686771

Start: 2461092

End: 2461502

Strand: Reverse

Name: zur [H]

Synonym: RBAM_023410

Alternate gene names: 154686771

Gene position: 2461502-2461092 (Counterclockwise)

Preceding gene: 154686772

Following gene: 154686769

Centisome position: 62.82

GC content: 42.58

Gene sequence:

>411_bases
ATGAACGTACAAGAAGCGTTGAACCTGCTGAAAGAAAAAGGGTATAAATATACGAGTAAGCGAGAAGACATGCTGCAGCT
TTTTGCTGATTCTGATAAATATCTGACCGCCAAAAACGTGCTTGCCGCATTAAATGACGACTATCCGGGTCTGAGCTTTG
ATACCATATACAGAAATCTTTCGTTATATGAAGAACTCGGCATTTTGGAAACGACGGAGCTTTCCGGAGAAAAACTGTTC
CGTTTTACATGCTCTTATACCCATCATCATCACCATTTTATCTGTTTAACCTGCGGGAAAACGAAGGAAATTGAGTCCTG
TCCGATGGATAAGCTGCACGATGATTTGGAAGGGTATGAAATCAGCGGCCATAAGTTTGAAATTTACGGCACCTGTCCGG
CGTGCCGATAA

Upstream 100 bases:

>100_bases
TTATAGGTATAATTTGATACATCATAAGAAAATGGCCTGCTGTTCAGACAGCTGCCATTTTCTTTTTGGAGCGATACCGT
GTTGTAAAGGGGAGGTCCTC

Downstream 100 bases:

>100_bases
AAAACCTCCTGCTTATACAGGAGGTTTTTTTCAGCTTTTGACATGCTGAAAGCTATGTTTGTTTTTATTAATCCAGGCGA
CGGCTTCAAGCCAATTCTGC

Product: Zur

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MNVQEALNLLKEKGYKYTSKREDMLQLFADSDKYLTAKNVLAALNDDYPGLSFDTIYRNLSLYEELGILETTELSGEKLF
RFTCSYTHHHHHFICLTCGKTKEIESCPMDKLHDDLEGYEISGHKFEIYGTCPACR

Sequences:

>Translated_136_residues
MNVQEALNLLKEKGYKYTSKREDMLQLFADSDKYLTAKNVLAALNDDYPGLSFDTIYRNLSLYEELGILETTELSGEKLF
RFTCSYTHHHHHFICLTCGKTKEIESCPMDKLHDDLEGYEISGHKFEIYGTCPACR
>Mature_136_residues
MNVQEALNLLKEKGYKYTSKREDMLQLFADSDKYLTAKNVLAALNDDYPGLSFDTIYRNLSLYEELGILETTELSGEKLF
RFTCSYTHHHHHFICLTCGKTKEIESCPMDKLHDDLEGYEISGHKFEIYGTCPACR

Specific function: Required for the zinc-specific repression of two operons implicated in zinc uptake, yciC and ycdHIyceA. Also represses the expression of rpmE2, the gene for ribosomal protein L31B, which is expressed only after the end of exponential growth [H]

COG id: COG0735

COG function: function code P; Fe2+/Zn2+ uptake regulation proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Fur family [H]

Homologues:

None

Paralogues:

None

Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002481 [H]

Pfam domain/function: PF01475 FUR [H]

EC number: NA

Molecular weight: Translated: 15714; Mature: 15714

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVQEALNLLKEKGYKYTSKREDMLQLFADSDKYLTAKNVLAALNDDYPGLSFDTIYRNL
CCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHH
SLYEELGILETTELSGEKLFRFTCSYTHHHHHFICLTCGKTKEIESCPMDKLHDDLEGYE
HHHHHCCCEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCEE
ISGHKFEIYGTCPACR
ECCCEEEEEECCCCCC
>Mature Secondary Structure
MNVQEALNLLKEKGYKYTSKREDMLQLFADSDKYLTAKNVLAALNDDYPGLSFDTIYRNL
CCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHH
SLYEELGILETTELSGEKLFRFTCSYTHHHHHFICLTCGKTKEIESCPMDKLHDDLEGYE
HHHHHCCCEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCEE
ISGHKFEIYGTCPACR
ECCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 9811636 [H]