| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
Click here to switch to the map view.
The map label for this gene is comGG [H]
Identifier: 154686730
GI number: 154686730
Start: 2429369
End: 2429746
Strand: Reverse
Name: comGG [H]
Synonym: RBAM_022990
Alternate gene names: 154686730
Gene position: 2429746-2429369 (Counterclockwise)
Preceding gene: 154686731
Following gene: 154686729
Centisome position: 62.01
GC content: 47.62
Gene sequence:
>378_bases ATGTACAAATCTGACGGTTTTATATATCCCGCGGTTCTGTTTGTTTCTGCCGCAGTTTTACTTGTCATCAGCTATACTTC GTCTGATTTCATCACCCGAAAAACATTTGCAAAAGAGGCCGGGGAGTACTGGATCGGAGAGAATCTGCTCCAAAACGGCG TGCTGCTGTCAAGCCGCCATATGACACAGGGACAAAAGGTCCAAACTGGTACACAGCGTTTTCCGTATGGCACCGTTTCT TTTCACATCACGGGGAGTGATCGCCGGGAAACGGTTCAGGTTACAATTCAGGCGGAAACAACGACAGGAACGAGACGGGA GGCTCACCTTTTGTTCGATCAGAAGAAGAAACAGCTGATTCAATGGACGGAAGTATAA
Upstream 100 bases:
>100_bases TGATGTGAAAAACGGCCTGCTCTTATTAGAGATTTCAAGCGTTACAGGTCAAAAGAATCAGGCGGTCATTCCGGTTTACA GCTCTTTTAAAGGTGATTAA
Downstream 100 bases:
>100_bases AAAAGAGGCGGCGGGACAACACTTCATAGTAAAGACAGCACTATGAGGTGAGAGCCGTGAAAACAAATGATTATGTAAAA TATATGACTGAGCAATTCGT
Product: ComGG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MYKSDGFIYPAVLFVSAAVLLVISYTSSDFITRKTFAKEAGEYWIGENLLQNGVLLSSRHMTQGQKVQTGTQRFPYGTVS FHITGSDRRETVQVTIQAETTTGTRREAHLLFDQKKKQLIQWTEV
Sequences:
>Translated_125_residues MYKSDGFIYPAVLFVSAAVLLVISYTSSDFITRKTFAKEAGEYWIGENLLQNGVLLSSRHMTQGQKVQTGTQRFPYGTVS FHITGSDRRETVQVTIQAETTTGTRREAHLLFDQKKKQLIQWTEV >Mature_125_residues MYKSDGFIYPAVLFVSAAVLLVISYTSSDFITRKTFAKEAGEYWIGENLLQNGVLLSSRHMTQGQKVQTGTQRFPYGTVS FHITGSDRRETVQVTIQAETTTGTRREAHLLFDQKKKQLIQWTEV
Specific function: Required for transformation and DNA binding [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein. Cell membrane; Peptidoglycan-anchor. Secreted. Note=About half of pre-ComGG is present as a peripheral membrane protein and the other half as an integral protein. Upon (partial) processing ComGG is translocated
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020372 - ProDom: PD078266 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14195; Mature: 14195
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKSDGFIYPAVLFVSAAVLLVISYTSSDFITRKTFAKEAGEYWIGENLLQNGVLLSSRH CCCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCCHHHHHCCEEEECCC MTQGQKVQTGTQRFPYGTVSFHITGSDRRETVQVTIQAETTTGTRREAHLLFDQKKKQLI CCCCCEECCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHH QWTEV HHCCC >Mature Secondary Structure MYKSDGFIYPAVLFVSAAVLLVISYTSSDFITRKTFAKEAGEYWIGENLLQNGVLLSSRH CCCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCCHHHHHCCEEEECCC MTQGQKVQTGTQRFPYGTVSFHITGSDRRETVQVTIQAETTTGTRREAHLLFDQKKKQLI CCCCCEECCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHH QWTEV HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2507524; 8969508; 9384377; 9422590; 9723928 [H]