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The map label for this gene is spoVAF [H]

Identifier: 154686580

GI number: 154686580

Start: 2241442

End: 2242923

Strand: Reverse

Name: spoVAF [H]

Synonym: RBAM_021490

Alternate gene names: 154686580

Gene position: 2242923-2241442 (Counterclockwise)

Preceding gene: 154686581

Following gene: 154686579

Centisome position: 57.24

GC content: 47.98

Gene sequence:

>1482_bases
ATGCCGGAAAAACCGGAAAACATGATCAAGGTGTACCGGGATCCTAGAAAAAATGAACAATTTTTTAAAGACCGCGTCGG
TATGGGAACGAGCTATGATGTCGGCGTCCGCAAAGTTCGAGTATTAGACCGGGAAGTCCAGATTTACTTTGTCAACGGAT
TAACCGATACTTTGTTTATCATTCATTTAATGGAACAGCTCGTCGACGTCAATAATTATGACGAGAATGCGGATGAAGCG
ATTGACGTTGTTGAAAACAGGCTTGTCAATCAGCAGGTTCAAAAAGTCAAAACGCTCGACGAAGCAACGGATCAAGTGCT
TTCCGGACTTGTGGCGGTTATCGTTGAAGACGCGGGCTTCGCCTTTATCGTTGACGTCAGAAGTTATCCCGGACGCACAC
CTGAAGAACCGGATACGGAAAAGGTCGTCCGCGGGGCAAGAGACGGTTTTATTGAAAATATCGTCATTAATACAGCATTG
ATCAGAAGACGAATCAGGGACGAAAGGCTCCGCGTCAAAATTACGAAAGTCGGCGAGCGCTCTAAGACCGATCTTGCGAT
TGTGTATATAGAAGACATCGCGGACCCGGACCTTGTCAGCATCGTCGAAAACGAAGTGAATGCGATTGACATTGACGGAT
TGACGATGGCTGATAAAACGGTGGAAGAATTCATCGTCAAACAGGGTTACAATCCGTTTCCGATGGTCAGATACACAGAG
CGGCCGGATGTAGCAGCCAATCACATTTTAGAAGGGCACGTCATCATCGTCGTCGATACGTCACCGAGCGTGATCATAAC
GCCGACAACGATATTTCACCATGTTCAGCATGCGGAAGAATACAGGCAGGCGCCTTCAGTGGGCACATTTTTAAGATGGA
TCAGGTTTTTCGGTATTATTGCTTCAACCGTTCTGCTTCCGATTTGGTTCCTCTTTGTTCTCGAACCGTCTCTTCTGCCT
GAAAGATTGGATTTTATCGGTTTAAATAAAAATACGCACATCCCGATCATTCTGCAAATCTTTTTGGCCGATTTGGGGAT
TGAGTTTCTCAGGATGGCCGCGATCCATACGCCGACCGCTTTATCCACCGCCATGGGTCTGATTGCGGCGGTGCTGATCG
GTCAAATCGCCATAGCGGTGGGGCTGTTTTCAGCAGAAGTGATTCTGTACGTATCGATCGCCGCCATCGGATCATTTACC
ACGCCGAGCTATGAGCTCAGCCTCGCCAATAAAATGATACGCCTCATCTTAATGGTGCTCGTGGCCATTTTCCAAGTGAA
AGGCTTTGTGATAGGTTTTACATTGCTGCTGATCATAATGGCGAATATCCGCTCGTTTCACACGCCGTATTTATGGCCGT
TTTTACCGTTTAACGGCAAGGCGCTGTGGCAGGTGCTCGTCCGGACGACAGTGCCGGGAGCCAAAGTCAGACCGAGCATT
GTTCACCCGAAAGACCGTCAAAGACAGCCAAGCGGTTCATAA

Upstream 100 bases:

>100_bases
ATCGGCGACATAGGTAAGATGGGAAGAAAAGATGACATATCCAAAGGCTCGCCGATCACGATGAAGGCGGTCGAATTCAT
TTTAGAAAGGAGCGAAAGCC

Downstream 100 bases:

>100_bases
TCGCATTGAAACCGACAGAAGATTATGATATTGTATGTCTTAACTTATACGGGACTTGTATAAGGACAGCTCAAAAGAAG
CTGTCCTTTTCACCCATATG

Product: SpoVAF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MPEKPENMIKVYRDPRKNEQFFKDRVGMGTSYDVGVRKVRVLDREVQIYFVNGLTDTLFIIHLMEQLVDVNNYDENADEA
IDVVENRLVNQQVQKVKTLDEATDQVLSGLVAVIVEDAGFAFIVDVRSYPGRTPEEPDTEKVVRGARDGFIENIVINTAL
IRRRIRDERLRVKITKVGERSKTDLAIVYIEDIADPDLVSIVENEVNAIDIDGLTMADKTVEEFIVKQGYNPFPMVRYTE
RPDVAANHILEGHVIIVVDTSPSVIITPTTIFHHVQHAEEYRQAPSVGTFLRWIRFFGIIASTVLLPIWFLFVLEPSLLP
ERLDFIGLNKNTHIPIILQIFLADLGIEFLRMAAIHTPTALSTAMGLIAAVLIGQIAIAVGLFSAEVILYVSIAAIGSFT
TPSYELSLANKMIRLILMVLVAIFQVKGFVIGFTLLLIIMANIRSFHTPYLWPFLPFNGKALWQVLVRTTVPGAKVRPSI
VHPKDRQRQPSGS

Sequences:

>Translated_493_residues
MPEKPENMIKVYRDPRKNEQFFKDRVGMGTSYDVGVRKVRVLDREVQIYFVNGLTDTLFIIHLMEQLVDVNNYDENADEA
IDVVENRLVNQQVQKVKTLDEATDQVLSGLVAVIVEDAGFAFIVDVRSYPGRTPEEPDTEKVVRGARDGFIENIVINTAL
IRRRIRDERLRVKITKVGERSKTDLAIVYIEDIADPDLVSIVENEVNAIDIDGLTMADKTVEEFIVKQGYNPFPMVRYTE
RPDVAANHILEGHVIIVVDTSPSVIITPTTIFHHVQHAEEYRQAPSVGTFLRWIRFFGIIASTVLLPIWFLFVLEPSLLP
ERLDFIGLNKNTHIPIILQIFLADLGIEFLRMAAIHTPTALSTAMGLIAAVLIGQIAIAVGLFSAEVILYVSIAAIGSFT
TPSYELSLANKMIRLILMVLVAIFQVKGFVIGFTLLLIIMANIRSFHTPYLWPFLPFNGKALWQVLVRTTVPGAKVRPSI
VHPKDRQRQPSGS
>Mature_492_residues
PEKPENMIKVYRDPRKNEQFFKDRVGMGTSYDVGVRKVRVLDREVQIYFVNGLTDTLFIIHLMEQLVDVNNYDENADEAI
DVVENRLVNQQVQKVKTLDEATDQVLSGLVAVIVEDAGFAFIVDVRSYPGRTPEEPDTEKVVRGARDGFIENIVINTALI
RRRIRDERLRVKITKVGERSKTDLAIVYIEDIADPDLVSIVENEVNAIDIDGLTMADKTVEEFIVKQGYNPFPMVRYTER
PDVAANHILEGHVIIVVDTSPSVIITPTTIFHHVQHAEEYRQAPSVGTFLRWIRFFGIIASTVLLPIWFLFVLEPSLLPE
RLDFIGLNKNTHIPIILQIFLADLGIEFLRMAAIHTPTALSTAMGLIAAVLIGQIAIAVGLFSAEVILYVSIAAIGSFTT
PSYELSLANKMIRLILMVLVAIFQVKGFVIGFTLLLIIMANIRSFHTPYLWPFLPFNGKALWQVLVRTTVPGAKVRPSIV
HPKDRQRQPSGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 55481; Mature: 55350

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEKPENMIKVYRDPRKNEQFFKDRVGMGTSYDVGVRKVRVLDREVQIYFVNGLTDTLFI
CCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHEECCEEEEEEECCCHHHHHH
IHLMEQLVDVNNYDENADEAIDVVENRLVNQQVQKVKTLDEATDQVLSGLVAVIVEDAGF
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
AFIVDVRSYPGRTPEEPDTEKVVRGARDGFIENIVINTALIRRRIRDERLRVKITKVGER
EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCC
SKTDLAIVYIEDIADPDLVSIVENEVNAIDIDGLTMADKTVEEFIVKQGYNPFPMVRYTE
CCCCEEEEEEECCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCEEECC
RPDVAANHILEGHVIIVVDTSPSVIITPTTIFHHVQHAEEYRQAPSVGTFLRWIRFFGII
CCCHHHHHEECCEEEEEEECCCCEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ASTVLLPIWFLFVLEPSLLPERLDFIGLNKNTHIPIILQIFLADLGIEFLRMAAIHTPTA
HHHHHHHHHHHHHHCHHHCHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
LSTAMGLIAAVLIGQIAIAVGLFSAEVILYVSIAAIGSFTTPSYELSLANKMIRLILMVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
VAIFQVKGFVIGFTLLLIIMANIRSFHTPYLWPFLPFNGKALWQVLVRTTVPGAKVRPSI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCC
VHPKDRQRQPSGS
CCCCCCCCCCCCC
>Mature Secondary Structure 
PEKPENMIKVYRDPRKNEQFFKDRVGMGTSYDVGVRKVRVLDREVQIYFVNGLTDTLFI
CCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHEECCEEEEEEECCCHHHHHH
IHLMEQLVDVNNYDENADEAIDVVENRLVNQQVQKVKTLDEATDQVLSGLVAVIVEDAGF
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
AFIVDVRSYPGRTPEEPDTEKVVRGARDGFIENIVINTALIRRRIRDERLRVKITKVGER
EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCC
SKTDLAIVYIEDIADPDLVSIVENEVNAIDIDGLTMADKTVEEFIVKQGYNPFPMVRYTE
CCCCEEEEEEECCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCEEECC
RPDVAANHILEGHVIIVVDTSPSVIITPTTIFHHVQHAEEYRQAPSVGTFLRWIRFFGII
CCCHHHHHEECCEEEEEEECCCCEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ASTVLLPIWFLFVLEPSLLPERLDFIGLNKNTHIPIILQIFLADLGIEFLRMAAIHTPTA
HHHHHHHHHHHHHHCHHHCHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
LSTAMGLIAAVLIGQIAIAVGLFSAEVILYVSIAAIGSFTTPSYELSLANKMIRLILMVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
VAIFQVKGFVIGFTLLLIIMANIRSFHTPYLWPFLPFNGKALWQVLVRTTVPGAKVRPSI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCC
VHPKDRQRQPSGS
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 7934829; 1368705; 3926949 [H]