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The map label for this gene is yphF [H]

Identifier: 154686529

GI number: 154686529

Start: 2194319

End: 2195053

Strand: Reverse

Name: yphF [H]

Synonym: RBAM_020970

Alternate gene names: 154686529

Gene position: 2195053-2194319 (Counterclockwise)

Preceding gene: 154686530

Following gene: 154686528

Centisome position: 56.02

GC content: 46.39

Gene sequence:

>735_bases
ATGCATAAGTTAAAAATGGCCGTCATAACGGCAATGGCGGTGCTCCTGCTGTCCGGCTGTCTGTACCCTGAAGCGGAAAA
AACTGAAAATAAAGTATCTTACAAACATCAGCTTCAGCAGGTGCAAGCGGCAGTGGATGAATTTAAAAAGGCGAACGGCG
GACTTCTGCCGATTCAGACAAAAGATATGAAAACACCGCTCTATCAAAAATATCCGATAGATTTTAAGCGGCTCGCGCCC
AGATACATAGAGGAGCCGCCGGCCTCAGCTTATGAAAGCGGGGGAATGTACCAATACGTGCTTGTCGATGTGGAACATAA
GCCGACCGTCAAGCTGGTCGATCTCCAAATGGCGGAAGCAATCCGCGACATGAAGCTGCGTGTCAAAATGTATCAGGAAA
AGCATACATATCCTCCCTATGAGGACGCCGTTTCAAAAGGGCTGTTCACTTTAAATAAAAAAAAGCTCGGCATGAAAGAC
TCTCCTTCAGTCAAAAGTCCGGTTTCAGGCACGTCTCTGCCGCTTTTAATCGGTGCTGACGGAGAAATCTATGCCGACTA
TCGCGTCGATCTCGCCCGCTGCCTGAAGGAAAACAAAAAGAAAATCAAACCGGGCGCGGAAATTCAAGATATTTTATGGA
AAGAGACTCCTTTCGTCCCGGCCTTTTCAGTCACATACACCGTAAATGAAAAACAGGAACCCGTTTTTTTAGAAAGTCAA
ACGAAACAGGAATGA

Upstream 100 bases:

>100_bases
TCTTCACTCGCTTATGCCTGCATGGTCATCTCGGGATTGATCGTGTTAATGGTCGTTTTCAGCGGGCCTGTCAATGAATA
AAGCAAAAAGGGGGCGCGGA

Downstream 100 bases:

>100_bases
ACCTTTTTCCCGCGCATACAAATAGGGAGAAAGGTTTTTTTGATTTTGATAGAAAAGACTGCCTGAAAATTTTCTAAAGA
TGTCATATTGAAATAGGACA

Product: YphF

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MHKLKMAVITAMAVLLLSGCLYPEAEKTENKVSYKHQLQQVQAAVDEFKKANGGLLPIQTKDMKTPLYQKYPIDFKRLAP
RYIEEPPASAYESGGMYQYVLVDVEHKPTVKLVDLQMAEAIRDMKLRVKMYQEKHTYPPYEDAVSKGLFTLNKKKLGMKD
SPSVKSPVSGTSLPLLIGADGEIYADYRVDLARCLKENKKKIKPGAEIQDILWKETPFVPAFSVTYTVNEKQEPVFLESQ
TKQE

Sequences:

>Translated_244_residues
MHKLKMAVITAMAVLLLSGCLYPEAEKTENKVSYKHQLQQVQAAVDEFKKANGGLLPIQTKDMKTPLYQKYPIDFKRLAP
RYIEEPPASAYESGGMYQYVLVDVEHKPTVKLVDLQMAEAIRDMKLRVKMYQEKHTYPPYEDAVSKGLFTLNKKKLGMKD
SPSVKSPVSGTSLPLLIGADGEIYADYRVDLARCLKENKKKIKPGAEIQDILWKETPFVPAFSVTYTVNEKQEPVFLESQ
TKQE
>Mature_244_residues
MHKLKMAVITAMAVLLLSGCLYPEAEKTENKVSYKHQLQQVQAAVDEFKKANGGLLPIQTKDMKTPLYQKYPIDFKRLAP
RYIEEPPASAYESGGMYQYVLVDVEHKPTVKLVDLQMAEAIRDMKLRVKMYQEKHTYPPYEDAVSKGLFTLNKKKLGMKD
SPSVKSPVSGTSLPLLIGADGEIYADYRVDLARCLKENKKKIKPGAEIQDILWKETPFVPAFSVTYTVNEKQEPVFLESQ
TKQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27708; Mature: 27708

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKLKMAVITAMAVLLLSGCLYPEAEKTENKVSYKHQLQQVQAAVDEFKKANGGLLPIQT
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
KDMKTPLYQKYPIDFKRLAPRYIEEPPASAYESGGMYQYVLVDVEHKPTVKLVDLQMAEA
CCCCCCCCCCCCCCHHHHCHHHHCCCCCHHHHCCCEEEEEEEEECCCCCEEEEHHHHHHH
IRDMKLRVKMYQEKHTYPPYEDAVSKGLFTLNKKKLGMKDSPSVKSPVSGTSLPLLIGAD
HHHHHHHHHHHHHHCCCCCHHHHHHHCCEEECHHHCCCCCCCCCCCCCCCCCCEEEEECC
GEIYADYRVDLARCLKENKKKIKPGAEIQDILWKETPFVPAFSVTYTVNEKQEPVFLESQ
CCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCEEECCC
TKQE
CCCC
>Mature Secondary Structure
MHKLKMAVITAMAVLLLSGCLYPEAEKTENKVSYKHQLQQVQAAVDEFKKANGGLLPIQT
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
KDMKTPLYQKYPIDFKRLAPRYIEEPPASAYESGGMYQYVLVDVEHKPTVKLVDLQMAEA
CCCCCCCCCCCCCCHHHHCHHHHCCCCCHHHHCCCEEEEEEEEECCCCCEEEEHHHHHHH
IRDMKLRVKMYQEKHTYPPYEDAVSKGLFTLNKKKLGMKDSPSVKSPVSGTSLPLLIGAD
HHHHHHHHHHHHHHCCCCCHHHHHHHCCEEECHHHCCCCCCCCCCCCCCCCCCEEEEECC
GEIYADYRVDLARCLKENKKKIKPGAEIQDILWKETPFVPAFSVTYTVNEKQEPVFLESQ
CCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCEEECCC
TKQE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 1729246 [H]