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The map label for this gene is hepS [H]

Identifier: 154686524

GI number: 154686524

Start: 2190083

End: 2190847

Strand: Reverse

Name: hepS [H]

Synonym: RBAM_020920

Alternate gene names: 154686524

Gene position: 2190847-2190083 (Counterclockwise)

Preceding gene: 154686525

Following gene: 154686523

Centisome position: 55.91

GC content: 42.09

Gene sequence:

>765_bases
GTGATATTTTTGCAAGACATCTACGGAACTTTAGCGAATCTAAATATGAAATTAAAACAAAAGCTGTCTCATCCTTATTT
AGCGAAACATATTTCTGCGCCTAAAATCGATGAGGATAAGCTTCTTCTTTTTCACGCTTTGTTTGAAGAGGCGGACATTA
AGAACAACGACAGAGAAAATTACATAGTAACTGCGATGCTTGTCCAAAGCGCCCTTGATACCCACGATGAAGTGACAACA
GCCAGAGCGTTAAAGCGAGACGAAAATAAAAACCGGCAGCTCACCGTGCTTGCCGGCGACTATTTCAGCGGACTGTATTA
TTCGCTTTTATCTGAAATGAAGGATATCTATATGATTCGGACGCTCGCTACGGCAATTAAAGAAATCAATGAGCATAAAA
TCCGTCTGTACGATCGGTCTGTTAATGACTTGAATCAATTGATCGAAAGCATGGCGATTGTGGAAGCGGCCCTGTTTCAC
AGAGTGTCAGACCACTTTAATCTTCCGCGCTGGAAAGAGCTGGCGAGTGATTTTTTTGTATATAAGCGGCTGATGAACGG
CAATGCTATATTTCTCGATGTCATCGGCAATATTGTAAAGTCAGGGAAATCAAAGGCTGACATAATGGAAGATAGCTTCC
GAAAGGCAAAGCAAAGCATTGAAACGCTGCTGCCGCTCAATTCACCAATCCAAAACCTAATGCTGAACCGGCTTAAAGCG
ATCAGCCAGGACAAAACATATCATCAGAAAGTGGAAGAAGGGTAA

Upstream 100 bases:

>100_bases
TACAGCCAATTTCTTTTTTTTATGCTATAATGATACCTGCGTATAATAATGACGAGTAAATCTCATACATATTAGAATAA
ATGTGAATTTGGGGACAAGG

Downstream 100 bases:

>100_bases
TCAACATGCAGGAGTCAAAAGAACAGCGCGTACACGGCGTGTTTGAAAAAATCTATAAAAATTATGACCAAATGAACTCT
GTTATCAGTTTTCAGCAGCA

Product: HepS

Products: NA

Alternate protein names: HEPPP synthase subunit 1; Spore germination protein C1 [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MIFLQDIYGTLANLNMKLKQKLSHPYLAKHISAPKIDEDKLLLFHALFEEADIKNNDRENYIVTAMLVQSALDTHDEVTT
ARALKRDENKNRQLTVLAGDYFSGLYYSLLSEMKDIYMIRTLATAIKEINEHKIRLYDRSVNDLNQLIESMAIVEAALFH
RVSDHFNLPRWKELASDFFVYKRLMNGNAIFLDVIGNIVKSGKSKADIMEDSFRKAKQSIETLLPLNSPIQNLMLNRLKA
ISQDKTYHQKVEEG

Sequences:

>Translated_254_residues
MIFLQDIYGTLANLNMKLKQKLSHPYLAKHISAPKIDEDKLLLFHALFEEADIKNNDRENYIVTAMLVQSALDTHDEVTT
ARALKRDENKNRQLTVLAGDYFSGLYYSLLSEMKDIYMIRTLATAIKEINEHKIRLYDRSVNDLNQLIESMAIVEAALFH
RVSDHFNLPRWKELASDFFVYKRLMNGNAIFLDVIGNIVKSGKSKADIMEDSFRKAKQSIETLLPLNSPIQNLMLNRLKA
ISQDKTYHQKVEEG
>Mature_254_residues
MIFLQDIYGTLANLNMKLKQKLSHPYLAKHISAPKIDEDKLLLFHALFEEADIKNNDRENYIVTAMLVQSALDTHDEVTT
ARALKRDENKNRQLTVLAGDYFSGLYYSLLSEMKDIYMIRTLATAIKEINEHKIRLYDRSVNDLNQLIESMAIVEAALFH
RVSDHFNLPRWKELASDFFVYKRLMNGNAIFLDVIGNIVKSGKSKADIMEDSFRKAKQSIETLLPLNSPIQNLMLNRLKA
ISQDKTYHQKVEEG

Specific function: Supplies heptaprenyl diphosphate, the precursor for the side chain of the isoprenoid quinone menaquinone-7 (MQ-7) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009920 [H]

Pfam domain/function: PF07307 HEPPP_synt_1 [H]

EC number: =2.5.1.30 [H]

Molecular weight: Translated: 29309; Mature: 29309

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFLQDIYGTLANLNMKLKQKLSHPYLAKHISAPKIDEDKLLLFHALFEEADIKNNDREN
CEEHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCH
YIVTAMLVQSALDTHDEVTTARALKRDENKNRQLTVLAGDYFSGLYYSLLSEMKDIYMIR
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
TLATAIKEINEHKIRLYDRSVNDLNQLIESMAIVEAALFHRVSDHFNLPRWKELASDFFV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
YKRLMNGNAIFLDVIGNIVKSGKSKADIMEDSFRKAKQSIETLLPLNSPIQNLMLNRLKA
HHHHHCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ISQDKTYHQKVEEG
HHCCHHHHHHHCCC
>Mature Secondary Structure
MIFLQDIYGTLANLNMKLKQKLSHPYLAKHISAPKIDEDKLLLFHALFEEADIKNNDREN
CEEHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCH
YIVTAMLVQSALDTHDEVTTARALKRDENKNRQLTVLAGDYFSGLYYSLLSEMKDIYMIR
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
TLATAIKEINEHKIRLYDRSVNDLNQLIESMAIVEAALFHRVSDHFNLPRWKELASDFFV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
YKRLMNGNAIFLDVIGNIVKSGKSKADIMEDSFRKAKQSIETLLPLNSPIQNLMLNRLKA
HHHHHCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ISQDKTYHQKVEEG
HHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 2121900; 9720033 [H]