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The map label for this gene is ypvA [H]

Identifier: 154686460

GI number: 154686460

Start: 2131923

End: 2133842

Strand: Reverse

Name: ypvA [H]

Synonym: RBAM_020280

Alternate gene names: 154686460

Gene position: 2133842-2131923 (Counterclockwise)

Preceding gene: 154686461

Following gene: 154686459

Centisome position: 54.45

GC content: 46.72

Gene sequence:

>1920_bases
GTGACAACATCACGTTTGCCTTTTGCTTTAACAAAAGAAAAGAATTTTTACGAAGAATTGAACAATTGGATTGGTGACGT
GTTTTACGATATCCTTCCCGAGAAAGGCTTTGACCTTCGGGATGAGCAGGTATTTATGGCGTTTCAGCTTGAACGGGCAT
TTAAAGAGAAAAAAGTCATGTTCGCTGAGGCAGGAGTCGGTACGGGGAAAACGCTGGTGTATCTGCTGTTTGCCATCAGC
TATGCCAGATATACGGGTAAACCGGCCATTATCGCATGCGCCGATGAAACGTTAATTGAACAGCTTGTCAAAAAAGAAGG
CGACATTTCCAAGCTGACAGAACATTTGGATCTGCAGATTGATACACGGCTGTCCAAATCCCATGAGCAGTATCTGTGTC
TGAAAAAGCTTGAGAAAACGATGCAGCGTTCTGATGATGAAAAGTGGCTGGATCTTTATGAGTCGCTGCCTTCATTCGTA
CACGAATCACAAGCGATGCAGCGCTTTTATCCGTACGGTGACCGCAAACAGTACGCTGATTTGACGAATGAAGAGTGGGC
AGGCGTCAGCTATGATTCCTTCCAAGATTGTTTAACTTGTGATATGAGACATAGATGCGGTTTAACACTTTCGAGAGATC
ATTACAGAAAATCAACGGATCTGATTGTTTGCTCCCATGATTTCTACATGGAGCATGTATGGACGGAAGAATCACGCAAA
AGGGAAGGACAGCTGCCGCTTTTGCCTGATCACAGCGCCGTCGTGTTTGATGAAGGACATCTGCTGGAATTCGCCGCGCA
AAAAGCGTTAACGTATCGCGTGAAGCAGTCGACGCTTGAGCTGTTTTTAGAGCGTCTGCTTCAAAATGATATCAGAGAGG
AATTCGCCGAACTGATTGAAGATGCCCTTGCCGCAAACGATGAGTTTTTCTATGTGCTGTCAGAGGAATCGAAGGAAATC
GCAGGCTCTCACCGATTGGACATCCAAAACGATCAGCGTGTTAAGCGTGCGGCTGACGAACTGTGCCGTCTGCTCGATAA
AATCGGCGAGGCGCTCGTATTTGAATCGGAAATGTATACGATCGATAAGTACGAGCTGTCAGTTGTAGAAGAATACGTCG
AACAAATGGCATATTCGCTGTCGCTGTATCAAAAGGATGCCATCAGCTGGCTTGAAACGAGGGATACAGACTCAACGTTT
GTTGTTATGCCGAGAACTGTAGCCGAAGTTTTGGGAGAAAAGGTCTTTTCTAAAAAGATTCCTTATATCTTCTCATCGGC
CACTCTTTCTGAGGGCGGTTCATTTGATTATATCGCTGACAGCCTCGGAATCCGTGATCCTTTATCATTCACCGTTGAAT
CTCCGTACGATTACGAGGAGCAAATGTCTGTTGCGCTTCACGGTGACATGACGTCTGAGCAGAAAACAGCCGAAACGATT
GAAACCATTAAGAAGAATGAAGGACGCACCCTCGTTCTTTTCCCTTCCTTTGAAGACATGAAGGAATTTAAAGAACAGGC
TGCCGCGTGGGAGCTGCCGTATCCGATATACTACGAAGGTGACGAAGAGATCTCCAGTCTGGTCGAAAAATTCCAGCGGG
ATGAAGAATCCGTGCTTTGTTCCGTCCACTTATGGGAAGGTCTTGACATTCCCGGTGACTCGCTCCGGAATGTGACCATT
TGGGCGTTGCCGTATCCGCCTCATGATCCCGTGTTTACCGCAAAGCGGAACGGAGCGAAAAAAGATCCGTTTGAGGAAGT
TGATCTTCCGTACATGCTCTTGAGAGTCCGGCAGGGAATCGGCCGCCTCATCCGTTCTAATCAGGACAGCGGAACCATAT
CCATTTATGCGGGCGGAGAAAGTGAACGGGTCTTGGCCGAAGTCAAAAAGATCTTGCCTGTTACACCGAAAATCGTATAA

Upstream 100 bases:

>100_bases
TGGCAAAAACTTGGCGAGGCCAAGTTTTTTTGTTGTATTGAAAAGGGTTAAATGATATTATAGATGGTCTGAATGCCGAA
TAGTTAGGGGTTGGAGTTGG

Downstream 100 bases:

>100_bases
AAACAAAAGCTGCAGGATTCTTATCCTGCGGCTTTTTTAAATCCGGGAAGTTGACTTTATCACGGCATTCCATTAGCCTG
TAATTGATAGTGAAAAGGGA

Product: YpvA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 639; Mature: 638

Protein sequence:

>639_residues
MTTSRLPFALTKEKNFYEELNNWIGDVFYDILPEKGFDLRDEQVFMAFQLERAFKEKKVMFAEAGVGTGKTLVYLLFAIS
YARYTGKPAIIACADETLIEQLVKKEGDISKLTEHLDLQIDTRLSKSHEQYLCLKKLEKTMQRSDDEKWLDLYESLPSFV
HESQAMQRFYPYGDRKQYADLTNEEWAGVSYDSFQDCLTCDMRHRCGLTLSRDHYRKSTDLIVCSHDFYMEHVWTEESRK
REGQLPLLPDHSAVVFDEGHLLEFAAQKALTYRVKQSTLELFLERLLQNDIREEFAELIEDALAANDEFFYVLSEESKEI
AGSHRLDIQNDQRVKRAADELCRLLDKIGEALVFESEMYTIDKYELSVVEEYVEQMAYSLSLYQKDAISWLETRDTDSTF
VVMPRTVAEVLGEKVFSKKIPYIFSSATLSEGGSFDYIADSLGIRDPLSFTVESPYDYEEQMSVALHGDMTSEQKTAETI
ETIKKNEGRTLVLFPSFEDMKEFKEQAAAWELPYPIYYEGDEEISSLVEKFQRDEESVLCSVHLWEGLDIPGDSLRNVTI
WALPYPPHDPVFTAKRNGAKKDPFEEVDLPYMLLRVRQGIGRLIRSNQDSGTISIYAGGESERVLAEVKKILPVTPKIV

Sequences:

>Translated_639_residues
MTTSRLPFALTKEKNFYEELNNWIGDVFYDILPEKGFDLRDEQVFMAFQLERAFKEKKVMFAEAGVGTGKTLVYLLFAIS
YARYTGKPAIIACADETLIEQLVKKEGDISKLTEHLDLQIDTRLSKSHEQYLCLKKLEKTMQRSDDEKWLDLYESLPSFV
HESQAMQRFYPYGDRKQYADLTNEEWAGVSYDSFQDCLTCDMRHRCGLTLSRDHYRKSTDLIVCSHDFYMEHVWTEESRK
REGQLPLLPDHSAVVFDEGHLLEFAAQKALTYRVKQSTLELFLERLLQNDIREEFAELIEDALAANDEFFYVLSEESKEI
AGSHRLDIQNDQRVKRAADELCRLLDKIGEALVFESEMYTIDKYELSVVEEYVEQMAYSLSLYQKDAISWLETRDTDSTF
VVMPRTVAEVLGEKVFSKKIPYIFSSATLSEGGSFDYIADSLGIRDPLSFTVESPYDYEEQMSVALHGDMTSEQKTAETI
ETIKKNEGRTLVLFPSFEDMKEFKEQAAAWELPYPIYYEGDEEISSLVEKFQRDEESVLCSVHLWEGLDIPGDSLRNVTI
WALPYPPHDPVFTAKRNGAKKDPFEEVDLPYMLLRVRQGIGRLIRSNQDSGTISIYAGGESERVLAEVKKILPVTPKIV
>Mature_638_residues
TTSRLPFALTKEKNFYEELNNWIGDVFYDILPEKGFDLRDEQVFMAFQLERAFKEKKVMFAEAGVGTGKTLVYLLFAISY
ARYTGKPAIIACADETLIEQLVKKEGDISKLTEHLDLQIDTRLSKSHEQYLCLKKLEKTMQRSDDEKWLDLYESLPSFVH
ESQAMQRFYPYGDRKQYADLTNEEWAGVSYDSFQDCLTCDMRHRCGLTLSRDHYRKSTDLIVCSHDFYMEHVWTEESRKR
EGQLPLLPDHSAVVFDEGHLLEFAAQKALTYRVKQSTLELFLERLLQNDIREEFAELIEDALAANDEFFYVLSEESKEIA
GSHRLDIQNDQRVKRAADELCRLLDKIGEALVFESEMYTIDKYELSVVEEYVEQMAYSLSLYQKDAISWLETRDTDSTFV
VMPRTVAEVLGEKVFSKKIPYIFSSATLSEGGSFDYIADSLGIRDPLSFTVESPYDYEEQMSVALHGDMTSEQKTAETIE
TIKKNEGRTLVLFPSFEDMKEFKEQAAAWELPYPIYYEGDEEISSLVEKFQRDEESVLCSVHLWEGLDIPGDSLRNVTIW
ALPYPPHDPVFTAKRNGAKKDPFEEVDLPYMLLRVRQGIGRLIRSNQDSGTISIYAGGESERVLAEVKKILPVTPKIV

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=615, Percent_Identity=26.8292682926829, Blast_Score=158, Evalue=9e-40,
Organism=Escherichia coli, GI1787018, Length=651, Percent_Identity=24.5775729646697, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014013
- InterPro:   IPR006555 [H]

Pfam domain/function: NA

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 73752; Mature: 73621

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSRLPFALTKEKNFYEELNNWIGDVFYDILPEKGFDLRDEQVFMAFQLERAFKEKKVM
CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEE
FAEAGVGTGKTLVYLLFAISYARYTGKPAIIACADETLIEQLVKKEGDISKLTEHLDLQI
EEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHCCEE
DTRLSKSHEQYLCLKKLEKTMQRSDDEKWLDLYESLPSFVHESQAMQRFYPYGDRKQYAD
EHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC
LTNEEWAGVSYDSFQDCLTCDMRHRCGLTLSRDHYRKSTDLIVCSHDFYMEHVWTEESRK
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEECHHHHHHHHCCHHHH
REGQLPLLPDHSAVVFDEGHLLEFAAQKALTYRVKQSTLELFLERLLQNDIREEFAELIE
CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DALAANDEFFYVLSEESKEIAGSHRLDIQNDQRVKRAADELCRLLDKIGEALVFESEMYT
HHHHCCCCEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCEE
IDKYELSVVEEYVEQMAYSLSLYQKDAISWLETRDTDSTFVVMPRTVAEVLGEKVFSKKI
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCC
PYIFSSATLSEGGSFDYIADSLGIRDPLSFTVESPYDYEEQMSVALHGDMTSEQKTAETI
CCEEECCCCCCCCCCHHHHHHCCCCCCCCEEECCCCCHHHHHEEEEECCCCCHHHHHHHH
ETIKKNEGRTLVLFPSFEDMKEFKEQAAAWELPYPIYYEGDEEISSLVEKFQRDEESVLC
HHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHCCCHHEEE
SVHLWEGLDIPGDSLRNVTIWALPYPPHDPVFTAKRNGAKKDPFEEVDLPYMLLRVRQGI
EEEEECCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCHHHCCHHHHHHHHHHHH
GRLIRSNQDSGTISIYAGGESERVLAEVKKILPVTPKIV
HHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TTSRLPFALTKEKNFYEELNNWIGDVFYDILPEKGFDLRDEQVFMAFQLERAFKEKKVM
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEE
FAEAGVGTGKTLVYLLFAISYARYTGKPAIIACADETLIEQLVKKEGDISKLTEHLDLQI
EEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHCCEE
DTRLSKSHEQYLCLKKLEKTMQRSDDEKWLDLYESLPSFVHESQAMQRFYPYGDRKQYAD
EHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC
LTNEEWAGVSYDSFQDCLTCDMRHRCGLTLSRDHYRKSTDLIVCSHDFYMEHVWTEESRK
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEECHHHHHHHHCCHHHH
REGQLPLLPDHSAVVFDEGHLLEFAAQKALTYRVKQSTLELFLERLLQNDIREEFAELIE
CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DALAANDEFFYVLSEESKEIAGSHRLDIQNDQRVKRAADELCRLLDKIGEALVFESEMYT
HHHHCCCCEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCEE
IDKYELSVVEEYVEQMAYSLSLYQKDAISWLETRDTDSTFVVMPRTVAEVLGEKVFSKKI
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCC
PYIFSSATLSEGGSFDYIADSLGIRDPLSFTVESPYDYEEQMSVALHGDMTSEQKTAETI
CCEEECCCCCCCCCCHHHHHHCCCCCCCCEEECCCCCHHHHHEEEEECCCCCHHHHHHHH
ETIKKNEGRTLVLFPSFEDMKEFKEQAAAWELPYPIYYEGDEEISSLVEKFQRDEESVLC
HHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHCCCHHEEE
SVHLWEGLDIPGDSLRNVTIWALPYPPHDPVFTAKRNGAKKDPFEEVDLPYMLLRVRQGI
EEEEECCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCHHHCCHHHHHHHHHHHH
GRLIRSNQDSGTISIYAGGESERVLAEVKKILPVTPKIV
HHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]