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The map label for this gene is ybaZ [H]

Identifier: 154686454

GI number: 154686454

Start: 2124484

End: 2124792

Strand: Reverse

Name: ybaZ [H]

Synonym: RBAM_020220

Alternate gene names: 154686454

Gene position: 2124792-2124484 (Counterclockwise)

Preceding gene: 154686456

Following gene: 154686452

Centisome position: 54.22

GC content: 48.54

Gene sequence:

>309_bases
ATGACATTTACGGAACGGGCGGTAGCCATTATCAAACAGATTCCTGAAGGAAAAGTGATGACGTATGGTCAAATTGCCGA
TCTTGCGGGAAGTCCGCGGGGAGCGAGGCAGGTTGTGAGGATTCTTCACTCCATGAGTAAAAAGCATCGTCTTCCTTGGC
ACAGGGTCATCAATGCAAAGGGCGAAATCGGATTGAGAGACGAAGAGATGTTTTCTGTACAGAAGCTGTCTCTTGAAGCT
GAGGGGGTAGCGGTCACGTCAGACGGACGGATCGATCTCAATTTATACGTCCATGATCCGAATATGTGA

Upstream 100 bases:

>100_bases
ACCATCTTATTTTATGACTCCAGAGTAAGGCATCATCATATGACGTCAAAACTGTTGTATGATACTAGGGAAATCATTTT
TAGTCGAAATGAGGAGTTGC

Downstream 100 bases:

>100_bases
AAAACCTGCCATATACCGGCAGGTTTTTCAGTTATATGCTTTGAGCCGGCCAGAAAGGTTTTGCCGTATATAAGGCCATT
CCTCCCGAAGGATGGAGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MTFTERAVAIIKQIPEGKVMTYGQIADLAGSPRGARQVVRILHSMSKKHRLPWHRVINAKGEIGLRDEEMFSVQKLSLEA
EGVAVTSDGRIDLNLYVHDPNM

Sequences:

>Translated_102_residues
MTFTERAVAIIKQIPEGKVMTYGQIADLAGSPRGARQVVRILHSMSKKHRLPWHRVINAKGEIGLRDEEMFSVQKLSLEA
EGVAVTSDGRIDLNLYVHDPNM
>Mature_101_residues
TFTERAVAIIKQIPEGKVMTYGQIADLAGSPRGARQVVRILHSMSKKHRLPWHRVINAKGEIGLRDEEMFSVQKLSLEAE
GVAVTSDGRIDLNLYVHDPNM

Specific function: Unknown

COG id: COG3695

COG function: function code L; Predicted methylated DNA-protein cysteine methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MGMT family [H]

Homologues:

Organism=Escherichia coli, GI1786659, Length=95, Percent_Identity=47.3684210526316, Blast_Score=87, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014048
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01035 DNA_binding_1 [H]

EC number: NA

Molecular weight: Translated: 11425; Mature: 11294

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFTERAVAIIKQIPEGKVMTYGQIADLAGSPRGARQVVRILHSMSKKHRLPWHRVINAK
CCCHHHHHHHHHHCCCCCEEECCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHEECCC
GEIGLRDEEMFSVQKLSLEAEGVAVTSDGRIDLNLYVHDPNM
CCCCCCHHHHHHHHHHEECCCCEEEECCCEEEEEEEEECCCC
>Mature Secondary Structure 
TFTERAVAIIKQIPEGKVMTYGQIADLAGSPRGARQVVRILHSMSKKHRLPWHRVINAK
CCHHHHHHHHHHCCCCCEEECCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHEECCC
GEIGLRDEEMFSVQKLSLEAEGVAVTSDGRIDLNLYVHDPNM
CCCCCCHHHHHHHHHHEECCCCEEEECCCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]