Click here to switch to the map view.

The map label for this gene is ypbQ [H]

Identifier: 154686451

GI number: 154686451

Start: 2122078

End: 2122584

Strand: Reverse

Name: ypbQ [H]

Synonym: RBAM_020190

Alternate gene names: 154686451

Gene position: 2122584-2122078 (Counterclockwise)

Preceding gene: 154686452

Following gene: 154686450

Centisome position: 54.17

GC content: 48.32

Gene sequence:

>507_bases
ATGTTTTGGCTGTTTATCATGCTGCTTGCGGCCCAGCGGATTGCGGAGATGATCGTGGCCCGGCGCAATGAGCAAAAGGT
GAAAAAGCAAGGCGCAGTCGAATACGGAGAAGGACATTATCCCTTTCTCGTCCTGATGCACGTGCTCTTTTTTGTCTCTC
TTACAGCTGAGGTGGCGGCGTTTCAAAAAACGCTTTCTCCAAGGTGGGCCGCCATTATATGTATTATTTTATTTGTACAG
GGGATCAGGTATTGGGCGCTATTATCATTAGGGCGGTATTGGAATACGAAAATTCTTGTCGTGCCGGATGCGGAGCTTGT
CAGAAAGGGGCCGTACAGGTGGATGAAGCACCCGAACTACGCGGTCGTCATCTTAGAATTTATTTTTCTGCCGCTGTTAT
ACGGAGCGTATTGGACACTGTTTCTCTTTTCGATTCTCAATGCCTGCATGCTCACTGTGAGGATTCGCGCCGAAGAGAAA
GCGCTAGAAGAAAACACCGCAAAATAG

Upstream 100 bases:

>100_bases
ACGGACGGCAGAAGGAAAACGAAAAAGGGCTGATCGGCGCTCTCGGGCCGGGATTTTCGTCTGAGCTTTTGCTGTTCAGC
TGGGAAAAGGGGGCTTCTTA

Downstream 100 bases:

>100_bases
AGATTGAAAATCATTCTCAATCATGATAAGATATAAATATGAAAATGATTCTCATTCAAGGTGGTGCCGAAAATGACAAT
GTTATTTTTATTTGCAGCCG

Product: YpbQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MFWLFIMLLAAQRIAEMIVARRNEQKVKKQGAVEYGEGHYPFLVLMHVLFFVSLTAEVAAFQKTLSPRWAAIICIILFVQ
GIRYWALLSLGRYWNTKILVVPDAELVRKGPYRWMKHPNYAVVILEFIFLPLLYGAYWTLFLFSILNACMLTVRIRAEEK
ALEENTAK

Sequences:

>Translated_168_residues
MFWLFIMLLAAQRIAEMIVARRNEQKVKKQGAVEYGEGHYPFLVLMHVLFFVSLTAEVAAFQKTLSPRWAAIICIILFVQ
GIRYWALLSLGRYWNTKILVVPDAELVRKGPYRWMKHPNYAVVILEFIFLPLLYGAYWTLFLFSILNACMLTVRIRAEEK
ALEENTAK
>Mature_168_residues
MFWLFIMLLAAQRIAEMIVARRNEQKVKKQGAVEYGEGHYPFLVLMHVLFFVSLTAEVAAFQKTLSPRWAAIICIILFVQ
GIRYWALLSLGRYWNTKILVVPDAELVRKGPYRWMKHPNYAVVILEFIFLPLLYGAYWTLFLFSILNACMLTVRIRAEEK
ALEENTAK

Specific function: Unknown

COG id: COG1755

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007269 [H]

Pfam domain/function: PF04140 ICMT [H]

EC number: NA

Molecular weight: Translated: 19605; Mature: 19605

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFWLFIMLLAAQRIAEMIVARRNEQKVKKQGAVEYGEGHYPFLVLMHVLFFVSLTAEVAA
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FQKTLSPRWAAIICIILFVQGIRYWALLSLGRYWNTKILVVPDAELVRKGPYRWMKHPNY
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCCCHHHHCCCCH
AVVILEFIFLPLLYGAYWTLFLFSILNACMLTVRIRAEEKALEENTAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFWLFIMLLAAQRIAEMIVARRNEQKVKKQGAVEYGEGHYPFLVLMHVLFFVSLTAEVAA
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FQKTLSPRWAAIICIILFVQGIRYWALLSLGRYWNTKILVVPDAELVRKGPYRWMKHPNY
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCCCHHHHCCCCH
AVVILEFIFLPLLYGAYWTLFLFSILNACMLTVRIRAEEKALEENTAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 8396117 [H]