| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is ypiP [H]
Identifier: 154686431
GI number: 154686431
Start: 2105201
End: 2105971
Strand: Reverse
Name: ypiP [H]
Synonym: RBAM_019990
Alternate gene names: 154686431
Gene position: 2105971-2105201 (Counterclockwise)
Preceding gene: 154686432
Following gene: 154686430
Centisome position: 53.74
GC content: 50.06
Gene sequence:
>771_bases ATGATCACAACGAGTTACCGACCAAGCGAATATACGATACACACAGCGCAGTCGCTCAGTGTCAAGCTGGGTGACACTTA CTGCAGCCGCAATAAACAGCCCATTGAAAAAATGCTGGAACGAGCGGCTAGCGATCTTTTAGTCATCGGAAAGGAACGGT TCGAACTTTACACGAAGCAAGGGGAGAAGTTCTTTTTTCACCCGAATACAGCGATGTTCCGCGCTAAGCGGTTTTTGAGA GGGGAAGCCGAGCCGTTGTTAAAAGCAGCCGGATTACGCGAAGGGGATTCCTTTTTAGATTGTACGCTCGGCCTGGCATC CGATGCGATTTTGGCAAGCCTGGCAGTCGGAAAAAGCGGACAAGTCATCGGCCTGGAGAAAAACAAGCTTGTCTCATTGC TTGTTGAAACAGGACTTCAAACGTGGGAAACCGGAATGGAGCAGCTCCAAACCGCCATGAAACGCATTCAGGTCAAACAT GCTGACTGCGCCGATTATTTGCTGGAGCTTCCTGATTCATCGGTAGATGTCATTTATTTTGACCCGATGTTTCACGAACC TGTTGAAATGTCAGACGGCATTGCACCGCTCCGCGCGCTGGCAGAAGAGGGTTTTAACGAAGAGTGCATCACGCAAGCCG TCCGCGCGGCGAAAAAATGCGTAGTGCTTAAAGACCATTGGAAAAGCCCGCGGTTTGAACGATACGGCTTCAAGGTGCTG AAAAGAAAGACGGCGCTTTTCCACTTCGGTGTCATCCATGTGAGCTCATGA
Upstream 100 bases:
>100_bases AAGGGCATGACATGGAGGAAATTATGAAAAATCTGACGGATGCCTTCGATGCGCACTGCTGAAATGCCCGAATTCCGGGC ATTTTCTTTTTGGAGAAAAA
Downstream 100 bases:
>100_bases TATCATGGGCTTCTTTTTCGTTAATCAGTGATTTCCATAACGACAAAATAAAGCAGCGTGAGAAGTGATACAGTCGCAAA TAAAGCGTTAATCATCTCAT
Product: YpiP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MITTSYRPSEYTIHTAQSLSVKLGDTYCSRNKQPIEKMLERAASDLLVIGKERFELYTKQGEKFFFHPNTAMFRAKRFLR GEAEPLLKAAGLREGDSFLDCTLGLASDAILASLAVGKSGQVIGLEKNKLVSLLVETGLQTWETGMEQLQTAMKRIQVKH ADCADYLLELPDSSVDVIYFDPMFHEPVEMSDGIAPLRALAEEGFNEECITQAVRAAKKCVVLKDHWKSPRFERYGFKVL KRKTALFHFGVIHVSS
Sequences:
>Translated_256_residues MITTSYRPSEYTIHTAQSLSVKLGDTYCSRNKQPIEKMLERAASDLLVIGKERFELYTKQGEKFFFHPNTAMFRAKRFLR GEAEPLLKAAGLREGDSFLDCTLGLASDAILASLAVGKSGQVIGLEKNKLVSLLVETGLQTWETGMEQLQTAMKRIQVKH ADCADYLLELPDSSVDVIYFDPMFHEPVEMSDGIAPLRALAEEGFNEECITQAVRAAKKCVVLKDHWKSPRFERYGFKVL KRKTALFHFGVIHVSS >Mature_256_residues MITTSYRPSEYTIHTAQSLSVKLGDTYCSRNKQPIEKMLERAASDLLVIGKERFELYTKQGEKFFFHPNTAMFRAKRFLR GEAEPLLKAAGLREGDSFLDCTLGLASDAILASLAVGKSGQVIGLEKNKLVSLLVETGLQTWETGMEQLQTAMKRIQVKH ADCADYLLELPDSSVDVIYFDPMFHEPVEMSDGIAPLRALAEEGFNEECITQAVRAAKKCVVLKDHWKSPRFERYGFKVL KRKTALFHFGVIHVSS
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004154 - InterPro: IPR007536 [H]
Pfam domain/function: PF04445 DUF548 [H]
EC number: NA
Molecular weight: Translated: 28799; Mature: 28799
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITTSYRPSEYTIHTAQSLSVKLGDTYCSRNKQPIEKMLERAASDLLVIGKERFELYTKQ CCCCCCCCCCEEEEECCEEEEEECCHHHCCCCCHHHHHHHHHHHCEEEECHHHHHHHHCC GEKFFFHPNTAMFRAKRFLRGEAEPLLKAAGLREGDSFLDCTLGLASDAILASLAVGKSG CCEEEECCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC QVIGLEKNKLVSLLVETGLQTWETGMEQLQTAMKRIQVKHADCADYLLELPDSSVDVIYF CEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEE DPMFHEPVEMSDGIAPLRALAEEGFNEECITQAVRAAKKCVVLKDHWKSPRFERYGFKVL CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEHHCCCCCCHHHHHHHHH KRKTALFHFGVIHVSS HHHHHHEEEEEEEECC >Mature Secondary Structure MITTSYRPSEYTIHTAQSLSVKLGDTYCSRNKQPIEKMLERAASDLLVIGKERFELYTKQ CCCCCCCCCCEEEEECCEEEEEECCHHHCCCCCHHHHHHHHHHHCEEEECHHHHHHHHCC GEKFFFHPNTAMFRAKRFLRGEAEPLLKAAGLREGDSFLDCTLGLASDAILASLAVGKSG CCEEEECCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC QVIGLEKNKLVSLLVETGLQTWETGMEQLQTAMKRIQVKHADCADYLLELPDSSVDVIYF CEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEE DPMFHEPVEMSDGIAPLRALAEEGFNEECITQAVRAAKKCVVLKDHWKSPRFERYGFKVL CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEHHCCCCCCHHHHHHHHH KRKTALFHFGVIHVSS HHHHHHEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]