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The map label for this gene is yrkJ1 [H]

Identifier: 154686411

GI number: 154686411

Start: 2088677

End: 2089204

Strand: Reverse

Name: yrkJ1 [H]

Synonym: RBAM_019790

Alternate gene names: 154686411

Gene position: 2089204-2088677 (Counterclockwise)

Preceding gene: 154686412

Following gene: 154686410

Centisome position: 53.32

GC content: 36.55

Gene sequence:

>528_bases
ATGGGATTAAGTATTTTGATTGGAAGTCTAATGGGTGGTTATGGGTCACATTTTTTCTCTGAAGATATCATAAACCTGGT
CTACGGAATATTGGTGATAATTGCCGCAGTCATGATGTTTATTCCAAAGACAGGAACAGAAGATAATCAAAGTGATCACA
TTCGCCCTCCAAAGATATTGACCTCAATAATGACTTTTGTTATCGGTTTGGCTTCAGGTATAGTCGGTGCTGGCGGCGCT
TTTCTACTTTTTCCACTAATGTTAGTCGTTTTAAAAATCCCTACAAAAATCACAATCGCAACATCACTCGCAGTTACATT
TATTTCATCGATTGGAACAACAGTTACAAAGCTCGTAATTGGACAGGTGCCTTTTATGCCAGCTTTAGTAATAGTGGCTG
CCAGCCTGATTGCATCTCCGATAGGTGTTTTAATTGGCAAGAAAATGAATGCTAACATTCTTCAAGGTATTTTGATATTC
GTTATTTTGATTACAACAGTAAAAATTTGGTTTGATATCTTACATTAA

Upstream 100 bases:

>100_bases
ACACCAAGCATCCCAGACAGTCCAGGTTTTTTTTGCAACATTATCCGGTGTATGGGCTTACCGGAAAGGTGGTTACTTAA
ATAAAGAGCTTATCACCATC

Downstream 100 bases:

>100_bases
TTGTTGAAGATGTTCTATATTAAGACATAATTTTTAGAGAAATCAAAAAATCCGCTTTGAAGGAGGAATTAGATGAAAGA
GGTTGCAGAGCTAACTTCAC

Product: YrkJ1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MGLSILIGSLMGGYGSHFFSEDIINLVYGILVIIAAVMMFIPKTGTEDNQSDHIRPPKILTSIMTFVIGLASGIVGAGGA
FLLFPLMLVVLKIPTKITIATSLAVTFISSIGTTVTKLVIGQVPFMPALVIVAASLIASPIGVLIGKKMNANILQGILIF
VILITTVKIWFDILH

Sequences:

>Translated_175_residues
MGLSILIGSLMGGYGSHFFSEDIINLVYGILVIIAAVMMFIPKTGTEDNQSDHIRPPKILTSIMTFVIGLASGIVGAGGA
FLLFPLMLVVLKIPTKITIATSLAVTFISSIGTTVTKLVIGQVPFMPALVIVAASLIASPIGVLIGKKMNANILQGILIF
VILITTVKIWFDILH
>Mature_174_residues
GLSILIGSLMGGYGSHFFSEDIINLVYGILVIIAAVMMFIPKTGTEDNQSDHIRPPKILTSIMTFVIGLASGIVGAGGAF
LLFPLMLVVLKIPTKITIATSLAVTFISSIGTTVTKLVIGQVPFMPALVIVAASLIASPIGVLIGKKMNANILQGILIFV
ILITTVKIWFDILH

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 18521; Mature: 18390

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSILIGSLMGGYGSHFFSEDIINLVYGILVIIAAVMMFIPKTGTEDNQSDHIRPPKIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
TSIMTFVIGLASGIVGAGGAFLLFPLMLVVLKIPTKITIATSLAVTFISSIGTTVTKLVI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GQVPFMPALVIVAASLIASPIGVLIGKKMNANILQGILIFVILITTVKIWFDILH
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
GLSILIGSLMGGYGSHFFSEDIINLVYGILVIIAAVMMFIPKTGTEDNQSDHIRPPKIL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
TSIMTFVIGLASGIVGAGGAFLLFPLMLVVLKIPTKITIATSLAVTFISSIGTTVTKLVI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GQVPFMPALVIVAASLIASPIGVLIGKKMNANILQGILIFVILITTVKIWFDILH
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]