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The map label for this gene is yobA [H]

Identifier: 154686399

GI number: 154686399

Start: 2079047

End: 2079400

Strand: Reverse

Name: yobA [H]

Synonym: RBAM_019670

Alternate gene names: 154686399

Gene position: 2079400-2079047 (Counterclockwise)

Preceding gene: 154686400

Following gene: 154686398

Centisome position: 53.07

GC content: 29.66

Gene sequence:

>354_bases
TTGTATAGAGTGTTTATAATGCTGTTAATTTTGTTATGTATAACATTAGGGTGTCAAAACCAACATAACAAACATTTTAT
GGAGGCTAAGCAAACTATGGTCGGCTATGTCATTTTAAAAAGAGAGAATCAAGCAATTCTCATACCTAATGAAAAAGCTG
ATGCTAAAGACTTTAAAAATCTTAGTGAAAAAGAGATTATTGAGAAGTATAGATCGGATATAGTTTTACTGGGACTTAGT
CAACTTAACAATAAAGATGACTTGAGCAAAGGACAAAAAATTCGTATTTGGTATAAAAAATTAAATGAATCTTCACCGCC
AAAAACAAACATCTCAAAGTTTGAAAGTATTTAG

Upstream 100 bases:

>100_bases
GGAATTTGTTTAAATTCATAAACATGAGGCGTTTTAGTCTGTCATTTCCTAAAACAGTGTTTTATTCTTGTTACAAATAT
GCAAGAAGGGCGGTTTGAAC

Downstream 100 bases:

>100_bases
TACATATTCTGTAATTCCTAGGAATACCGCTGAAAAAACTGAAGCGGCATATTGAACAGAAATAATGTCTTCTAACCTTA
CCTCATTCGCGGTGGCTTAT

Product: YobA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MYRVFIMLLILLCITLGCQNQHNKHFMEAKQTMVGYVILKRENQAILIPNEKADAKDFKNLSEKEIIEKYRSDIVLLGLS
QLNNKDDLSKGQKIRIWYKKLNESSPPKTNISKFESI

Sequences:

>Translated_117_residues
MYRVFIMLLILLCITLGCQNQHNKHFMEAKQTMVGYVILKRENQAILIPNEKADAKDFKNLSEKEIIEKYRSDIVLLGLS
QLNNKDDLSKGQKIRIWYKKLNESSPPKTNISKFESI
>Mature_117_residues
MYRVFIMLLILLCITLGCQNQHNKHFMEAKQTMVGYVILKRENQAILIPNEKADAKDFKNLSEKEIIEKYRSDIVLLGLS
QLNNKDDLSKGQKIRIWYKKLNESSPPKTNISKFESI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021598
- InterPro:   IPR012340 [H]

Pfam domain/function: PF11518 DUF3221 [H]

EC number: NA

Molecular weight: Translated: 13658; Mature: 13658

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRVFIMLLILLCITLGCQNQHNKHFMEAKQTMVGYVILKRENQAILIPNEKADAKDFKN
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCEEEECCCCCCHHHHHC
LSEKEIIEKYRSDIVLLGLSQLNNKDDLSKGQKIRIWYKKLNESSPPKTNISKFESI
CCHHHHHHHHHCCEEEEEHHHCCCCCCCCCCCEEEHHHHHCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MYRVFIMLLILLCITLGCQNQHNKHFMEAKQTMVGYVILKRENQAILIPNEKADAKDFKN
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCEEEECCCCCCHHHHHC
LSEKEIIEKYRSDIVLLGLSQLNNKDDLSKGQKIRIWYKKLNESSPPKTNISKFESI
CCHHHHHHHHHCCEEEEEHHHCCCCCCCCCCCEEEHHHHHCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]