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The map label for this gene is cgeD [H]

Identifier: 154686392

GI number: 154686392

Start: 2073293

End: 2074564

Strand: Reverse

Name: cgeD [H]

Synonym: RBAM_019600

Alternate gene names: 154686392

Gene position: 2074564-2073293 (Counterclockwise)

Preceding gene: 154686393

Following gene: 154686391

Centisome position: 52.94

GC content: 44.18

Gene sequence:

>1272_bases
ATGGAAAAGAAGATCTCAATTATCTTAACGAGTTACAACAAACCGGATCTTGTGAAACAGGCGATTGAAAGTGTTTTGCA
TCAGACCTACAGAAATTGGGAGCTGTTTGTAATGGATGATCATTCAAATGAAGAAACCTCGGCTGCCATCAGTACGTATA
TAAAAGATCCTCGCATATATTATGACAACAGTTTTATCAATCCTGCCGAACGGCTGAAGTCGACCCGGTATGCCGTTTTG
ATTAATGATGCGCTTTCACGGGCTAAAGGCGAATACATCACTTATTTGACAGACGACACCGTATTTCATCCGGATAGGCT
CAGCCGCATGGCGGAAGCGCTTAATCAATACAGCGAGTTTGATGCCGTCTATTCCAGCCAGAAGGTGATACATGTAAACG
GGCGCGGAACAGAACAATTCCACTTCTATCGTTTTGCTGAAGAGGTGCTAGATCAGGCCGCTTTTCTCGTTGATCACTGT
TCAGTGATGCACCGGAGATCATTGCTTGAGCGTGTGAAAGAGAAGTTCGGCAGCTTTTGGGACGAAGATGTTATGCATTG
GAATCACGGAGACTCTGTTTTTTGGAGCAGGATCAACACATTTACATCATTTCTGCCGATAAAAGAAGTGTTGGATACGA
CCTATAAAACACCCCACTCATTTCAGAACACGTATCAATCGCTTCCGTCTGTCCTGATCGACGGATCCTTTGTAAAGGGG
ACGGATCAGAAAGTATATCAGCTTGACCGAAATAAAAGGAAGCCTGTAAACGAGCGCTGGCATACGTTATATGAAGGGCG
AACCGTCGTCATTCCGGATCCGTTTTTATTTCAATATGAGGAAGAGAACTCCGTCAGTATTCCGAATTTTCAGCTCGTCA
GGGATCAGTTTCATGTTTATTTTATAGAAGACGGGGAGAAAAGGCTGGTTGATCATAGCGCATTTCGCTTTTACCGATTT
AAACGGCATGACATCCCGGCATTAGAACGGGACGAAATACAAGCGCTTCCGGACGGTCCGCCGATCAGCAGGGGGACATC
GGGGTGTATTCAACATCTGCCCGGGAGAATGCTGTTTCGCATTGAACAGGAATTTTATGTTTATTTGAGAGGGGTTCTCC
ATCCGATCAGTCATGACGTAGCGAAACGCTTTTTTGCGAATCAGAAGGCGATACCCATTTCCTTTCAGCAAATTAAACAA
TTACCAATTGGAATGCCGTTCTATCCGGTGTACGATGAAATTATGAGAAATCTCAATATAACAAAAGGTTGA

Upstream 100 bases:

>100_bases
GCGATTTCAAGCATCGTCAGCTGGGGTGCTTTTTAATAACGGATATCAGGCTCTGTCTCTTTCGGAGCCGTTTTTTATGT
TTTACAGAAGGGGTGATGGG

Downstream 100 bases:

>100_bases
GAGATGCAGTTGGATGTGTAAGGAAAAGGAGAGCTTTTATGACCGATCAATTTGATAAAACCGAGAAGCAGTATATAGAG
CTTACTTCCGGCATTCAGAG

Product: CgeD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MEKKISIILTSYNKPDLVKQAIESVLHQTYRNWELFVMDDHSNEETSAAISTYIKDPRIYYDNSFINPAERLKSTRYAVL
INDALSRAKGEYITYLTDDTVFHPDRLSRMAEALNQYSEFDAVYSSQKVIHVNGRGTEQFHFYRFAEEVLDQAAFLVDHC
SVMHRRSLLERVKEKFGSFWDEDVMHWNHGDSVFWSRINTFTSFLPIKEVLDTTYKTPHSFQNTYQSLPSVLIDGSFVKG
TDQKVYQLDRNKRKPVNERWHTLYEGRTVVIPDPFLFQYEEENSVSIPNFQLVRDQFHVYFIEDGEKRLVDHSAFRFYRF
KRHDIPALERDEIQALPDGPPISRGTSGCIQHLPGRMLFRIEQEFYVYLRGVLHPISHDVAKRFFANQKAIPISFQQIKQ
LPIGMPFYPVYDEIMRNLNITKG

Sequences:

>Translated_423_residues
MEKKISIILTSYNKPDLVKQAIESVLHQTYRNWELFVMDDHSNEETSAAISTYIKDPRIYYDNSFINPAERLKSTRYAVL
INDALSRAKGEYITYLTDDTVFHPDRLSRMAEALNQYSEFDAVYSSQKVIHVNGRGTEQFHFYRFAEEVLDQAAFLVDHC
SVMHRRSLLERVKEKFGSFWDEDVMHWNHGDSVFWSRINTFTSFLPIKEVLDTTYKTPHSFQNTYQSLPSVLIDGSFVKG
TDQKVYQLDRNKRKPVNERWHTLYEGRTVVIPDPFLFQYEEENSVSIPNFQLVRDQFHVYFIEDGEKRLVDHSAFRFYRF
KRHDIPALERDEIQALPDGPPISRGTSGCIQHLPGRMLFRIEQEFYVYLRGVLHPISHDVAKRFFANQKAIPISFQQIKQ
LPIGMPFYPVYDEIMRNLNITKG
>Mature_423_residues
MEKKISIILTSYNKPDLVKQAIESVLHQTYRNWELFVMDDHSNEETSAAISTYIKDPRIYYDNSFINPAERLKSTRYAVL
INDALSRAKGEYITYLTDDTVFHPDRLSRMAEALNQYSEFDAVYSSQKVIHVNGRGTEQFHFYRFAEEVLDQAAFLVDHC
SVMHRRSLLERVKEKFGSFWDEDVMHWNHGDSVFWSRINTFTSFLPIKEVLDTTYKTPHSFQNTYQSLPSVLIDGSFVKG
TDQKVYQLDRNKRKPVNERWHTLYEGRTVVIPDPFLFQYEEENSVSIPNFQLVRDQFHVYFIEDGEKRLVDHSAFRFYRF
KRHDIPALERDEIQALPDGPPISRGTSGCIQHLPGRMLFRIEQEFYVYLRGVLHPISHDVAKRFFANQKAIPISFQQIKQ
LPIGMPFYPVYDEIMRNLNITKG

Specific function: May be involved in maturation of the outermost layer of the spore [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spore coat polysaccharide biosynthesis protein spsA [H]

Homologues:

Organism=Escherichia coli, GI1788372, Length=105, Percent_Identity=39.0476190476191, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 49800; Mature: 49800

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKISIILTSYNKPDLVKQAIESVLHQTYRNWELFVMDDHSNEETSAAISTYIKDPRIY
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCEEE
YDNSFINPAERLKSTRYAVLINDALSRAKGEYITYLTDDTVFHPDRLSRMAEALNQYSEF
ECCCCCCHHHHHCCCCEEEEEHHHHHHCCCCEEEEEECCCEECHHHHHHHHHHHHHHHHH
DAVYSSQKVIHVNGRGTEQFHFYRFAEEVLDQAAFLVDHCSVMHRRSLLERVKEKFGSFW
HHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DEDVMHWNHGDSVFWSRINTFTSFLPIKEVLDTTYKTPHSFQNTYQSLPSVLIDGSFVKG
CHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
TDQKVYQLDRNKRKPVNERWHTLYEGRTVVIPDPFLFQYEEENSVSIPNFQLVRDQFHVY
CCHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCEEEEECCCCCCCCCCHHEEECCEEEE
FIEDGEKRLVDHSAFRFYRFKRHDIPALERDEIQALPDGPPISRGTSGCIQHLPGRMLFR
EEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCCCHHHHH
IEQEFYVYLRGVLHPISHDVAKRFFANQKAIPISFQQIKQLPIGMPFYPVYDEIMRNLNI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCC
TKG
CCC
>Mature Secondary Structure
MEKKISIILTSYNKPDLVKQAIESVLHQTYRNWELFVMDDHSNEETSAAISTYIKDPRIY
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCEEE
YDNSFINPAERLKSTRYAVLINDALSRAKGEYITYLTDDTVFHPDRLSRMAEALNQYSEF
ECCCCCCHHHHHCCCCEEEEEHHHHHHCCCCEEEEEECCCEECHHHHHHHHHHHHHHHHH
DAVYSSQKVIHVNGRGTEQFHFYRFAEEVLDQAAFLVDHCSVMHRRSLLERVKEKFGSFW
HHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DEDVMHWNHGDSVFWSRINTFTSFLPIKEVLDTTYKTPHSFQNTYQSLPSVLIDGSFVKG
CHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
TDQKVYQLDRNKRKPVNERWHTLYEGRTVVIPDPFLFQYEEENSVSIPNFQLVRDQFHVY
CCHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCEEEEECCCCCCCCCCHHEEECCEEEE
FIEDGEKRLVDHSAFRFYRFKRHDIPALERDEIQALPDGPPISRGTSGCIQHLPGRMLFR
EEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCCCHHHHH
IEQEFYVYLRGVLHPISHDVAKRFFANQKAIPISFQQIKQLPIGMPFYPVYDEIMRNLNI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCC
TKG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7592393; 9734814; 9384377 [H]