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The map label for this gene is yodM [H]

Identifier: 154686377

GI number: 154686377

Start: 2062046

End: 2062657

Strand: Reverse

Name: yodM [H]

Synonym: RBAM_019450

Alternate gene names: 154686377

Gene position: 2062657-2062046 (Counterclockwise)

Preceding gene: 154686378

Following gene: 154686376

Centisome position: 52.64

GC content: 47.22

Gene sequence:

>612_bases
TTGTACAAGCCAGCAAGTCTTTTCGCATTGTTTATTCTGCTCGCAGCAGCGATCCGGATAGAAGCCGTCCGGGTTTTTGA
TGAGCGTGTCATAGAAGCGGCTGTCAGGATCAGGGCTGCCTGGCTGAATGAATTGATGTTATGGATAACGGAGCTCGGCA
CGACCGCGGTGCTTTTGCCGCTTCTTCTTTTGACAGGCGCGGCTCTGTATATGTACAAAAAAACGCCGGATGTTGTTTTT
TTGCCGCTTCTCTTTCTCATTGAACGGATTGTAAACATAAAAATAAAAGAATTGATTGAAAGAGCCAGACCCGCTTTTGA
ACCGCTCGTCCATGAAACCTCATACAGTTTTCCGAGCGGCCACTCCATGAATTCGGCAGTGATGTATCCCGTCATCGGTT
ACTTTTTGATCAAGCATGTTCCGTTTTTCACGAAAAGAAAACGGGCCGTCACCGTCTTTACCGGGGTTCTCGTCATTCTG
ATCGGATTCAGCAGAATTTATTTGGGCGCGCATTTTCCGACGGATGTGCTTGCCGGATTCAGTCTCGGACTTTGCCTCGT
TTCGCTTTTTGCGCTCTTTGACGAAAAGTATCATCCGTTTCGACAAAAATAG

Upstream 100 bases:

>100_bases
ATAGACGAAGAGCTTGATGAAGACTGAAACTGCGGAACCGAAGTGAAAAAGCTTCGGTTTTTTCAATCAGCTCGGGAGAA
TGAAACATGGGGGGAAAACG

Downstream 100 bases:

>100_bases
AGACAGGAAAAATGAGAAAAAACGCTAATACTATTAAGAAATAAGAGGGAGGGATCTTGATGCTGTTATCGCTGCCCGTG
TTTAAAAAAAAGATTTGCGC

Product: YodM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MYKPASLFALFILLAAAIRIEAVRVFDERVIEAAVRIRAAWLNELMLWITELGTTAVLLPLLLLTGAALYMYKKTPDVVF
LPLLFLIERIVNIKIKELIERARPAFEPLVHETSYSFPSGHSMNSAVMYPVIGYFLIKHVPFFTKRKRAVTVFTGVLVIL
IGFSRIYLGAHFPTDVLAGFSLGLCLVSLFALFDEKYHPFRQK

Sequences:

>Translated_203_residues
MYKPASLFALFILLAAAIRIEAVRVFDERVIEAAVRIRAAWLNELMLWITELGTTAVLLPLLLLTGAALYMYKKTPDVVF
LPLLFLIERIVNIKIKELIERARPAFEPLVHETSYSFPSGHSMNSAVMYPVIGYFLIKHVPFFTKRKRAVTVFTGVLVIL
IGFSRIYLGAHFPTDVLAGFSLGLCLVSLFALFDEKYHPFRQK
>Mature_203_residues
MYKPASLFALFILLAAAIRIEAVRVFDERVIEAAVRIRAAWLNELMLWITELGTTAVLLPLLLLTGAALYMYKKTPDVVF
LPLLFLIERIVNIKIKELIERARPAFEPLVHETSYSFPSGHSMNSAVMYPVIGYFLIKHVPFFTKRKRAVTVFTGVLVIL
IGFSRIYLGAHFPTDVLAGFSLGLCLVSLFALFDEKYHPFRQK

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PA-phosphatase related phosphoesterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016118
- InterPro:   IPR000326 [H]

Pfam domain/function: PF01569 PAP2 [H]

EC number: NA

Molecular weight: Translated: 23051; Mature: 23051

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKPASLFALFILLAAAIRIEAVRVFDERVIEAAVRIRAAWLNELMLWITELGTTAVLLP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLLTGAALYMYKKTPDVVFLPLLFLIERIVNIKIKELIERARPAFEPLVHETSYSFPSG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC
HSMNSAVMYPVIGYFLIKHVPFFTKRKRAVTVFTGVLVILIGFSRIYLGAHFPTDVLAGF
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
SLGLCLVSLFALFDEKYHPFRQK
HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MYKPASLFALFILLAAAIRIEAVRVFDERVIEAAVRIRAAWLNELMLWITELGTTAVLLP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLLTGAALYMYKKTPDVVFLPLLFLIERIVNIKIKELIERARPAFEPLVHETSYSFPSG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC
HSMNSAVMYPVIGYFLIKHVPFFTKRKRAVTVFTGVLVILIGFSRIYLGAHFPTDVLAGF
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
SLGLCLVSLFALFDEKYHPFRQK
HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]