| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is yojJ [H]
Identifier: 154686351
GI number: 154686351
Start: 2041130
End: 2041756
Strand: Reverse
Name: yojJ [H]
Synonym: RBAM_019190
Alternate gene names: 154686351
Gene position: 2041756-2041130 (Counterclockwise)
Preceding gene: 154686354
Following gene: 154686350
Centisome position: 52.1
GC content: 50.08
Gene sequence:
>627_bases ATGCGCCACACTCAAATGACGGAAAGCGCGTTTACCGCTGCCGTTCAAACGTATTTGAAACAAATTACGGAGGATGCCGG AATGATACTGCGGACATTGGATGAAAAAGACCAATGCCTTCTTTGCGAATTAGATGAACTGGGACATACGTTTCAGGAAA TGCAGGCTGTCGCTTCGTCGTTTTACCTGCAGTCATATATCGAACACTTTACGCCTTCCTATACAGAGCTGGCGAGGGCC GTGCAGCATCTGGCGGAAGAAAAACACGGAGCGCTGATTGTGATTGAACGTGCAGATCCGCTGGACGGAATGATACAAAA AGGGACCAGCCTGCATGCCGAGATCAGTGCAGCTTTAATTGAGAGTATTTTTTATCCCGGCAATCCGCTTCATGACGGAG CCGTATTGGTCAGAGAAAACCGGGTTGTATCAGCAGCCAATGTGCTCCCGCTCACAACAAAACATGTCGATCTCAAATAC GGGACGCGCCACAGGGCCGCGATGGGACTTTCGGCCGTGACTGATGCACTCGTGCTCGTTGTTTCAGAAGAAACGGGAAA AATGTCCTTTGCTAAAGACGGCGGACTGTATCCGCTTGTTTCGCCGCGGGCGCTTCATACGAAATAA
Upstream 100 bases:
>100_bases AATTCCATATGATGTGCGCCTCCTTTCATGATTATGGTGCACACAGCGGCGCATATCCATGCGCACGATGCAGAAAATAA GGGAAAGGAGCTGATGTGAC
Downstream 100 bases:
>100_bases TAAGAAAATGGGAATATTGTACCCATTTAATATTAATAAGGTGAACATCTTTACCTTTTTCTGTATTGATGTTATCGTTT AAATATACATAAAATTTAAA
Product: YojJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MRHTQMTESAFTAAVQTYLKQITEDAGMILRTLDEKDQCLLCELDELGHTFQEMQAVASSFYLQSYIEHFTPSYTELARA VQHLAEEKHGALIVIERADPLDGMIQKGTSLHAEISAALIESIFYPGNPLHDGAVLVRENRVVSAANVLPLTTKHVDLKY GTRHRAAMGLSAVTDALVLVVSEETGKMSFAKDGGLYPLVSPRALHTK
Sequences:
>Translated_208_residues MRHTQMTESAFTAAVQTYLKQITEDAGMILRTLDEKDQCLLCELDELGHTFQEMQAVASSFYLQSYIEHFTPSYTELARA VQHLAEEKHGALIVIERADPLDGMIQKGTSLHAEISAALIESIFYPGNPLHDGAVLVRENRVVSAANVLPLTTKHVDLKY GTRHRAAMGLSAVTDALVLVVSEETGKMSFAKDGGLYPLVSPRALHTK >Mature_208_residues MRHTQMTESAFTAAVQTYLKQITEDAGMILRTLDEKDQCLLCELDELGHTFQEMQAVASSFYLQSYIEHFTPSYTELARA VQHLAEEKHGALIVIERADPLDGMIQKGTSLHAEISAALIESIFYPGNPLHDGAVLVRENRVVSAANVLPLTTKHVDLKY GTRHRAAMGLSAVTDALVLVVSEETGKMSFAKDGGLYPLVSPRALHTK
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014046 - InterPro: IPR003390 - InterPro: IPR019457 [H]
Pfam domain/function: PF02457 DisA_N; PF10372 YojJ [H]
EC number: NA
Molecular weight: Translated: 22894; Mature: 22894
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHTQMTESAFTAAVQTYLKQITEDAGMILRTLDEKDQCLLCELDELGHTFQEMQAVASS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHH FYLQSYIEHFTPSYTELARAVQHLAEEKHGALIVIERADPLDGMIQKGTSLHAEISAALI HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHH ESIFYPGNPLHDGAVLVRENRVVSAANVLPLTTKHVDLKYGTRHRAAMGLSAVTDALVLV HHHHCCCCCCCCCEEEEECCCEEECCCCCEECEEEEEECCCCCHHHHHHHHHHHHHHEEE VSEETGKMSFAKDGGLYPLVSPRALHTK EECCCCCEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRHTQMTESAFTAAVQTYLKQITEDAGMILRTLDEKDQCLLCELDELGHTFQEMQAVASS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHH FYLQSYIEHFTPSYTELARAVQHLAEEKHGALIVIERADPLDGMIQKGTSLHAEISAALI HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHH ESIFYPGNPLHDGAVLVRENRVVSAANVLPLTTKHVDLKYGTRHRAAMGLSAVTDALVLV HHHHCCCCCCCCCEEEEECCCEEECCCCCEECEEEEEECCCCCHHHHHHHHHHHHHHEEE VSEETGKMSFAKDGGLYPLVSPRALHTK EECCCCCEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]