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The map label for this gene is yoaB [H]

Identifier: 154686306

GI number: 154686306

Start: 1997896

End: 1999062

Strand: Reverse

Name: yoaB [H]

Synonym: RBAM_018740

Alternate gene names: 154686306

Gene position: 1999062-1997896 (Counterclockwise)

Preceding gene: 154686307

Following gene: 154686303

Centisome position: 51.01

GC content: 49.1

Gene sequence:

>1167_bases
ATGCTTAATAAAATAGGAATTCCGAAACAGCTCGCATGGGGATTTTTGGGAGTCGTGCTGTTTATGATGGGGGACGGCCT
TGAACAAGGCTGGCTCAGCCCGTTTTTAGTTGAAAACGGCTTGACGGTACAGCAATCAGCATCCCTGTTTACGGTTTACG
GTATTTCTCTCGCTGTGGCGTCTTGGTTTTCAGGGGTCTGCCTCGAAGCCTTCGGCGCAAAGCGGACGATGTTTATGGGG
CTGTTGTTTTACGTTATCGGAACAGCCGCGTTTATCGCATACGGATTTGAAAATCTTAATTTGTCGGTGATGTATGTCAC
GTATTTTATTAAAGGGCTGGGTTATCCGCTGTTTGCCTATTCTTTTTTGACATGGGTGATTTACCGGTCGCCGAAAAACA
GGCTCAGTACGGCGGTCGGCTGGTTCTGGATTGCATATTGCTGCGGGATGTTTGTATTCGGTGCTTGGTATTCAAGCTGG
GCCATCAAATCCTTCGGCTATTTGAATACACTGTGGAGTTCAATTTTCTGGGTCTGCCTCGGCGCGTTTTTTGCTTTGAT
TTTAAATAGGGACCGCTTTGAAAAGAAAAAGGCAGATAAGCGGGAAAAGGCGCAGGAATTAATGAAGGGAATCACCATCC
TTGCTGAAAATCCGCGCGTGCTCTCTGGGGGGATCATTCGGATCATTAACAGCATTGGTACATACGGATTTCCGGTATTT
CTTCCGATGCATATGGCGCAGCACGGCATTTCTACAAATGTATGGCTTCAAATTTGGGGAACGATCTTTCTCGGAAATAT
CGTCTTTAACTTAATCTTCGGCGCAGTCGGCGATGCATTCGGCTGGAAGAAGACTGTCATGTGGTTCGGGGGAGTGGGCT
GCGGCATTTTTACTCTTTTATTATATTATGCTCCTGTTGTATCACATGGGAACTTGCTTTTCGTCAGCATTGTCGGTTTT
ATATGGGGAGGGCTCCTCGCCGGATTCGTTCCGATCGGGGCTATCGTGCCGACGGCGGCCGGCAGCGATAAAGGTGCTGC
CCATGTCTGTGTTAAATCTGGCTGCGGGCCCTGTCGGCATTTGTCGGCCCCGCGCTTGCCTGGGCGTTCATCGGGCTTGT
CGGCGCACAAGGCGTTGTATGGATTTTCGCAGCGCTCTATTTCGTAA

Upstream 100 bases:

>100_bases
GGAAATATACGCAAAAATTATTTACTCATTTTCAGCCGGCGGTGAAAGCCTGACTTGGGGATGAGATGACAACATGAAAG
ATTGCTGAGGAGGAACAAAA

Downstream 100 bases:

>100_bases
GTGCAATCTGGACAAATCAAATCAAAATACCTGAAGAGAAAACGGCAAAACACAATAAAGCATTGCCTGAATACGCTTCT
TAACAGCACCGCCCCGAAAA

Product: YoaB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MLNKIGIPKQLAWGFLGVVLFMMGDGLEQGWLSPFLVENGLTVQQSASLFTVYGISLAVASWFSGVCLEAFGAKRTMFMG
LLFYVIGTAAFIAYGFENLNLSVMYVTYFIKGLGYPLFAYSFLTWVIYRSPKNRLSTAVGWFWIAYCCGMFVFGAWYSSW
AIKSFGYLNTLWSSIFWVCLGAFFALILNRDRFEKKKADKREKAQELMKGITILAENPRVLSGGIIRIINSIGTYGFPVF
LPMHMAQHGISTNVWLQIWGTIFLGNIVFNLIFGAVGDAFGWKKTVMWFGGVGCGIFTLLLYYAPVVSHGNLLFVSIVGF
IWGGLLAGFVPIGAIVPTAAGSDKGAAHVCVKSGCGPCRHLSAPRLPGRSSGLSAHKALYGFSQRSIS

Sequences:

>Translated_388_residues
MLNKIGIPKQLAWGFLGVVLFMMGDGLEQGWLSPFLVENGLTVQQSASLFTVYGISLAVASWFSGVCLEAFGAKRTMFMG
LLFYVIGTAAFIAYGFENLNLSVMYVTYFIKGLGYPLFAYSFLTWVIYRSPKNRLSTAVGWFWIAYCCGMFVFGAWYSSW
AIKSFGYLNTLWSSIFWVCLGAFFALILNRDRFEKKKADKREKAQELMKGITILAENPRVLSGGIIRIINSIGTYGFPVF
LPMHMAQHGISTNVWLQIWGTIFLGNIVFNLIFGAVGDAFGWKKTVMWFGGVGCGIFTLLLYYAPVVSHGNLLFVSIVGF
IWGGLLAGFVPIGAIVPTAAGSDKGAAHVCVKSGCGPCRHLSAPRLPGRSSGLSAHKALYGFSQRSIS
>Mature_388_residues
MLNKIGIPKQLAWGFLGVVLFMMGDGLEQGWLSPFLVENGLTVQQSASLFTVYGISLAVASWFSGVCLEAFGAKRTMFMG
LLFYVIGTAAFIAYGFENLNLSVMYVTYFIKGLGYPLFAYSFLTWVIYRSPKNRLSTAVGWFWIAYCCGMFVFGAWYSSW
AIKSFGYLNTLWSSIFWVCLGAFFALILNRDRFEKKKADKREKAQELMKGITILAENPRVLSGGIIRIINSIGTYGFPVF
LPMHMAQHGISTNVWLQIWGTIFLGNIVFNLIFGAVGDAFGWKKTVMWFGGVGCGIFTLLLYYAPVVSHGNLLFVSIVGF
IWGGLLAGFVPIGAIVPTAAGSDKGAAHVCVKSGCGPCRHLSAPRLPGRSSGLSAHKALYGFSQRSIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. CsbX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR004748 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42604; Mature: 42604

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKIGIPKQLAWGFLGVVLFMMGDGLEQGWLSPFLVENGLTVQQSASLFTVYGISLAVA
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCHHHHCCCCEEHHCCCCHHHHHHHHHHH
SWFSGVCLEAFGAKRTMFMGLLFYVIGTAAFIAYGFENLNLSVMYVTYFIKGLGYPLFAY
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHH
SFLTWVIYRSPKNRLSTAVGWFWIAYCCGMFVFGAWYSSWAIKSFGYLNTLWSSIFWVCL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAFFALILNRDRFEKKKADKREKAQELMKGITILAENPRVLSGGIIRIINSIGTYGFPVF
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCCCCHHH
LPMHMAQHGISTNVWLQIWGTIFLGNIVFNLIFGAVGDAFGWKKTVMWFGGVGCGIFTLL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHH
LYYAPVVSHGNLLFVSIVGFIWGGLLAGFVPIGAIVPTAAGSDKGAAHVCVKSGCGPCRH
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHEECCCCCCHHC
LSAPRLPGRSSGLSAHKALYGFSQRSIS
CCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNKIGIPKQLAWGFLGVVLFMMGDGLEQGWLSPFLVENGLTVQQSASLFTVYGISLAVA
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCHHHHCCCCEEHHCCCCHHHHHHHHHHH
SWFSGVCLEAFGAKRTMFMGLLFYVIGTAAFIAYGFENLNLSVMYVTYFIKGLGYPLFAY
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHH
SFLTWVIYRSPKNRLSTAVGWFWIAYCCGMFVFGAWYSSWAIKSFGYLNTLWSSIFWVCL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAFFALILNRDRFEKKKADKREKAQELMKGITILAENPRVLSGGIIRIINSIGTYGFPVF
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCCCCHHH
LPMHMAQHGISTNVWLQIWGTIFLGNIVFNLIFGAVGDAFGWKKTVMWFGGVGCGIFTLL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHH
LYYAPVVSHGNLLFVSIVGFIWGGLLAGFVPIGAIVPTAAGSDKGAAHVCVKSGCGPCRH
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHEECCCCCCHHC
LSAPRLPGRSSGLSAHKALYGFSQRSIS
CCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]