| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is yoxA [H]
Identifier: 154686281
GI number: 154686281
Start: 1970972
End: 1971940
Strand: Reverse
Name: yoxA [H]
Synonym: RBAM_018480
Alternate gene names: 154686281
Gene position: 1971940-1970972 (Counterclockwise)
Preceding gene: 154686282
Following gene: 154686280
Centisome position: 50.32
GC content: 46.13
Gene sequence:
>969_bases ATGACGATTGAACATACGACTTATTTAGGGGTTTCAGCCATAAAAGCGGAGACTGATCAGGCTGAATGCATCATTGTGCC GGAGTGGGGATCAAATGTCATATCGCTTCGGGATAAAAGAACCGGTATGCGGCTTCTGAGAGAACCGGAAACTGCGGAGC AATTCCGCGCAAAACCGATGCTGTACGGCATTCCCGTTTTATTCCCGCCGAACCGGATTACGGACGGGACGTTTCGTTTT GACGGCCGCGCGTATCAATTTGAGATAAACGAAGAGGATAAACATAATCATATTCACGGCTTTCTTCATAATCAGCATTG GAAAGCGGCGGCAGCGAAAGAAGAGGGGGATGGAATGACAGTCGAAACAGAAATTGATCTTTCAAAGATTCCCCGTGTTC ATAAACAATTTCCGCACGATGTCGTTGTCCGGATGACCTATACATTAAAAGACAATGTGTTTACGCAGCGGGCGCTGATT ATCAACAAGGGAACGGAGGCTTTTCCTTGGGGGCTCGGCTATCATTCAACTTTTGTTTTCAATGAAGAGCGATCCCGTCT ATTTTTGACGGCTGACCGCATGTGGGAATTAAATGAACGTTTCGTGCCGACGGGCCGTTTATTGGATGTTCCTGATAAAG AAGCGTTCCGTCATGGGATGTCTTTGAAAAATAAACAGTTTGACGATGTTTTTCTTTCTTCCGGACGGAATGGCGGCAAT AATGAAGCTGTTATTTATCATCCGGATGAGCAATTATCCGTTTTGTATCAGGCAGACACGTCTTTCAAGCATTGGGTGGT ATATAACGGTGACGGAAAGCAGGGGTTTGTCAGTCTTGAGCCTTATACTTCCGTTACAGATGCATTTAATCTGAATCAGC CTGCATCACTGACAGGGCTTCAGATTCTGAAACCGGGCGAAGAAGCGGCTGCGTCATCCAGGATCACCATTTTGCATGAC GAAGAATAG
Upstream 100 bases:
>100_bases TCGCTCAGTTCATACGGGCGATGTTTTTTTAGAGAAGGAAAATGAGTTTAGAAAATGGAATTCCTATACATGCTAGAAAA CAAGGAAAGGGCAGGTGCTT
Downstream 100 bases:
>100_bases GAAAGAGGCGGGATAACATTGAAAACATATGTGAAACGCTTGAGCGCGGTGATTCTGCTTTTGATCATTGCCGCAGTTCC TTATATTGATGATGCGGCTA
Product: YoxA
Products: NA
Alternate protein names: Galactose mutarotase [H]
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MTIEHTTYLGVSAIKAETDQAECIIVPEWGSNVISLRDKRTGMRLLREPETAEQFRAKPMLYGIPVLFPPNRITDGTFRF DGRAYQFEINEEDKHNHIHGFLHNQHWKAAAAKEEGDGMTVETEIDLSKIPRVHKQFPHDVVVRMTYTLKDNVFTQRALI INKGTEAFPWGLGYHSTFVFNEERSRLFLTADRMWELNERFVPTGRLLDVPDKEAFRHGMSLKNKQFDDVFLSSGRNGGN NEAVIYHPDEQLSVLYQADTSFKHWVVYNGDGKQGFVSLEPYTSVTDAFNLNQPASLTGLQILKPGEEAAASSRITILHD EE
Sequences:
>Translated_322_residues MTIEHTTYLGVSAIKAETDQAECIIVPEWGSNVISLRDKRTGMRLLREPETAEQFRAKPMLYGIPVLFPPNRITDGTFRF DGRAYQFEINEEDKHNHIHGFLHNQHWKAAAAKEEGDGMTVETEIDLSKIPRVHKQFPHDVVVRMTYTLKDNVFTQRALI INKGTEAFPWGLGYHSTFVFNEERSRLFLTADRMWELNERFVPTGRLLDVPDKEAFRHGMSLKNKQFDDVFLSSGRNGGN NEAVIYHPDEQLSVLYQADTSFKHWVVYNGDGKQGFVSLEPYTSVTDAFNLNQPASLTGLQILKPGEEAAASSRITILHD EE >Mature_321_residues TIEHTTYLGVSAIKAETDQAECIIVPEWGSNVISLRDKRTGMRLLREPETAEQFRAKPMLYGIPVLFPPNRITDGTFRFD GRAYQFEINEEDKHNHIHGFLHNQHWKAAAAKEEGDGMTVETEIDLSKIPRVHKQFPHDVVVRMTYTLKDNVFTQRALII NKGTEAFPWGLGYHSTFVFNEERSRLFLTADRMWELNERFVPTGRLLDVPDKEAFRHGMSLKNKQFDDVFLSSGRNGGNN EAVIYHPDEQLSVLYQADTSFKHWVVYNGDGKQGFVSLEPYTSVTDAFNLNQPASLTGLQILKPGEEAAASSRITILHDE E
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldose epimerase family [H]
Homologues:
Organism=Escherichia coli, GI1790311, Length=236, Percent_Identity=29.2372881355932, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.3 [H]
Molecular weight: Translated: 36744; Mature: 36613
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIEHTTYLGVSAIKAETDQAECIIVPEWGSNVISLRDKRTGMRLLREPETAEQFRAKPM CCEEEEEEECEEEEECCCCCCCEEEEECCCCCEEEEECCHHHHHHHCCCCHHHHHHCCCE LYGIPVLFPPNRITDGTFRFDGRAYQFEINEEDKHNHIHGFLHNQHWKAAAAKEEGDGMT EEECEEEECCCCCCCCEEEECCEEEEEEECCCCCCCCEEEEEECCCCCEECCCCCCCCEE VETEIDLSKIPRVHKQFPHDVVVRMTYTLKDNVFTQRALIINKGTEAFPWGLGYHSTFVF EEEECCHHHCCHHHHHCCCEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCEEEEE NEERSRLFLTADRMWELNERFVPTGRLLDVPDKEAFRHGMSLKNKQFDDVFLSSGRNGGN CCCCCEEEEEECCEEECCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCHHHHHCCCCCCC NEAVIYHPDEQLSVLYQADTSFKHWVVYNGDGKQGFVSLEPYTSVTDAFNLNQPASLTGL CCEEEECCCCCEEEEEECCCCEEEEEEEECCCCCEEEEECCCCCHHCCCCCCCCCCCCCE QILKPGEEAAASSRITILHDEE EEECCCHHHHCCCEEEEEECCC >Mature Secondary Structure TIEHTTYLGVSAIKAETDQAECIIVPEWGSNVISLRDKRTGMRLLREPETAEQFRAKPM CEEEEEEECEEEEECCCCCCCEEEEECCCCCEEEEECCHHHHHHHCCCCHHHHHHCCCE LYGIPVLFPPNRITDGTFRFDGRAYQFEINEEDKHNHIHGFLHNQHWKAAAAKEEGDGMT EEECEEEECCCCCCCCEEEECCEEEEEEECCCCCCCCEEEEEECCCCCEECCCCCCCCEE VETEIDLSKIPRVHKQFPHDVVVRMTYTLKDNVFTQRALIINKGTEAFPWGLGYHSTFVF EEEECCHHHCCHHHHHCCCEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCEEEEE NEERSRLFLTADRMWELNERFVPTGRLLDVPDKEAFRHGMSLKNKQFDDVFLSSGRNGGN CCCCCEEEEEECCEEECCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCHHHHHCCCCCCC NEAVIYHPDEQLSVLYQADTSFKHWVVYNGDGKQGFVSLEPYTSVTDAFNLNQPASLTGL CCEEEECCCCCEEEEEECCCCEEEEEEEECCCCCEEEEECCCCCHHCCCCCCCCCCCCCE QILKPGEEAAASSRITILHDEE EEECCCHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 7711903 [H]