| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is yvgO [H]
Identifier: 154686190
GI number: 154686190
Start: 1819712
End: 1820248
Strand: Reverse
Name: yvgO [H]
Synonym: RBAM_017570
Alternate gene names: 154686190
Gene position: 1820248-1819712 (Counterclockwise)
Preceding gene: 154686191
Following gene: 154686189
Centisome position: 46.45
GC content: 44.88
Gene sequence:
>537_bases ATGAAAATCGCCAGAACGATAGTCGGATCATGCTTAGCTTTATCTCTAACAATTCCTTTCACAGCCAGTGCCTCAGCAGC CAGTCAGTCTGAACACGCAAACGCGTCTCACGTTTCACCCGTTGCAAATCCGCTAGAAAGTAAATTATCCCAAACAGCAG ACCAAAACGTAAAAGCAGCAGGTGTTGATGCCGGGCTGAACGTAAACGTAGATGTTCTCGGAATCTCAGATCGCATTGCT GAAGCGGTTAAGTCAGATCAAAACCGAACCGGCTGGGTAAAAAATGTCATGGAAACAACATTTTACGCATCAGGACAGAA GTACAACGTCATGGTGTTCAATTTAAATCAAGAATATGAAGACCGGTTTAACGGCGTTCAATTTTACGGATCAGCCGTTT ATGACGGTATTACTTACGGAATCTGGGTCTTCGAAGACGGGTCCTTCGATAACAAAGGAGACGGGGGCTGGATCAATTGG GCATTCAGAGGGTGGTTCGATCGTGATAATCAGCATATTGAATTCCACAGACCTTAA
Upstream 100 bases:
>100_bases GACATGACTTTTGAGAAAATCTACTCTTTGCTTGGTCAATTTTTCTGCGATACCATGAATTTGCAACAATTTTTAAAAAT TTCCTCAGGAGGTCATAGCC
Downstream 100 bases:
>100_bases TACGGAGAAAACTTGCGGCAGCGCCCGCAAGTTTTTTTTAACTGGACTGCACATTTTTCACCGTGATAACGACTATACTT GAAGTGCGGGCTCCGATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKIARTIVGSCLALSLTIPFTASASAASQSEHANASHVSPVANPLESKLSQTADQNVKAAGVDAGLNVNVDVLGISDRIA EAVKSDQNRTGWVKNVMETTFYASGQKYNVMVFNLNQEYEDRFNGVQFYGSAVYDGITYGIWVFEDGSFDNKGDGGWINW AFRGWFDRDNQHIEFHRP
Sequences:
>Translated_178_residues MKIARTIVGSCLALSLTIPFTASASAASQSEHANASHVSPVANPLESKLSQTADQNVKAAGVDAGLNVNVDVLGISDRIA EAVKSDQNRTGWVKNVMETTFYASGQKYNVMVFNLNQEYEDRFNGVQFYGSAVYDGITYGIWVFEDGSFDNKGDGGWINW AFRGWFDRDNQHIEFHRP >Mature_178_residues MKIARTIVGSCLALSLTIPFTASASAASQSEHANASHVSPVANPLESKLSQTADQNVKAAGVDAGLNVNVDVLGISDRIA EAVKSDQNRTGWVKNVMETTFYASGQKYNVMVFNLNQEYEDRFNGVQFYGSAVYDGITYGIWVFEDGSFDNKGDGGWINW AFRGWFDRDNQHIEFHRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19621; Mature: 19621
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIARTIVGSCLALSLTIPFTASASAASQSEHANASHVSPVANPLESKLSQTADQNVKAA CCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE GVDAGLNVNVDVLGISDRIAEAVKSDQNRTGWVKNVMETTFYASGQKYNVMVFNLNQEYE CCCCCCCCEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHHH DRFNGVQFYGSAVYDGITYGIWVFEDGSFDNKGDGGWINWAFRGWFDRDNQHIEFHRP HHCCCEEEECHHHHCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCEEEEECC >Mature Secondary Structure MKIARTIVGSCLALSLTIPFTASASAASQSEHANASHVSPVANPLESKLSQTADQNVKAA CCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE GVDAGLNVNVDVLGISDRIAEAVKSDQNRTGWVKNVMETTFYASGQKYNVMVFNLNQEYE CCCCCCCCEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHHH DRFNGVQFYGSAVYDGITYGIWVFEDGSFDNKGDGGWINWAFRGWFDRDNQHIEFHRP HHCCCEEEECHHHHCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 11988534 [H]