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The map label for this gene is yloA [H]

Identifier: 154685980

GI number: 154685980

Start: 1551228

End: 1552934

Strand: Reverse

Name: yloA [H]

Synonym: RBAM_015470

Alternate gene names: 154685980

Gene position: 1552934-1551228 (Counterclockwise)

Preceding gene: 154685998

Following gene: 154685929

Centisome position: 39.63

GC content: 46.69

Gene sequence:

>1707_bases
ATGTCTTTTGATGGCATGTTTACATACGGAATGACACATGAATTAAACAACCGGATCGCCGGAGGCCGGATTACGAGAGT
CCATCAGCCTTTTAAGCACGATGTGATATTTCATATCCGCGCTAACGGAAAAAACCATAAATTATTATTATCGGCGCATC
CGAGCTATTCACGGGTGCACATGACAAACCAGGCCTATGAAAATCCGAGCGAGCCGCCGATGTTTTGTATGCTGCTCAGA
AAGCATATAGAAGGCGGATTTATTGAGAAAATAGAACAGGCCGGATTAGACCGGATTATGATATTCCGGATAAAAAGCAG
AAATGAAATCGGCGACGAAACCGTCAGAACACTGTATGTGGAAATTATGGGACGGCACAGCAATATTATTCTGACTGACG
GAGAAGGAGCCATCATCGACGGGCTGAAACATTTATCTCCGTCGATGAACAGCTACCGGACCGTTCTGCCGGGCTATGAT
TACAAGCTTCCTCCCGCTCAGGAAAAAATTTCGCCGCTTGCCGCGGATGAAGAGGACGTTTTGCGTTATCTCAGTTTTCA
GGAAGGACGGCTTGACCAGCAGATCGTCAGACACTTCTCCGGTGTTTCTCCGCTGTTTGCAAAAGAAGCCGTGCACAGAG
CGGGTCTCGCTAACAAAATAACGCTGCCGAAGACGCTGATTGAAATGTTCCATGCCGTGAAAGATTGCAGGTTTACACCG
AACATTACGACAGCCGGCGGAAAGGAATACTTTTATCTCCTGTCTCTCACACATGTAAACGGAGAGGAGCGCACCTTTCA
CTCACTGAGTGAGCTGTTGGACCGGTTTTATTTCGGCAAGGCGGAACGCGACCGCGTCAAACAGCAGGCTCAGGATCTCG
AGCGGTTTGTCGCAAATGAACGGAAAAAGAACGCCAATAAGATAAAAAAGCTGGAAAAGACGCTCGACTACTCAGAAAAT
GCGAAGGAATTCCAGCTATACGGCGAACTGCTGACGGCGAATTTGTATATGCTGAAAAAAGGTGACAAAGAAGCGGAAGT
CATCAATTATTATGATGAAGAAAGTAAGACAGTGACCATCCCTTTAAATCCGAACAAAACACCGTCAGAAAACGCGCAGA
TGTATTTTACAAAGTACCAAAAGGCGAAGAATTCCGTCGAGGTGGTAAAACAACAGATCCGTCTGGCCGAGGAGGAAATC
GCTTATTTCGATCAGCTGATCCAGCAGCTCTCCTCCGCCTCCACAAAGGATATTCACGAAATAAGGGAGGAGCTTGTGGA
AGGCAAATATCTGCGACCGAAACAGCAGCGAGGACAGAAAAAACAGAAGCAGCACGTTCCTGTTTTGGAGCAATATGAAT
CTTCACGGGGATTGACGATTCTTGTCGGCAAAAACAATAAACAAAATGAGTACTTAACGACAAAAGCTGCCGCAAGGGAT
GATTTATGGTTCCACACGAAAGACATTCCGGGTTCCCACGTTGTGATTAAAAGCAACGATCCGGATGAACAATCCATACT
GGAGGCGGCTGCGATCGCCGCTTATTTTTCCAAGGCGAAAGATTCCGGCTCCGTTCCCGTTGATTATACAAAAATCAGAC
ACGTGAAAAAGCCAAACGGCGCAAAGCCCGGATTTGTCACCTATGACAGCCAGCATACCGTATTTGTCACACCTGATGCC
GACCTTGTCATACGGCTGAAAAAATAA

Upstream 100 bases:

>100_bases
GCCTCGCTTTAGAGATGTCACTCTGTAAACAAGCTTATTCTGACTCGTCCCTTTTCATGCTATAATTATCGAATGCAGGA
AGAAGGAAAGGGTGTTTTAT

Downstream 100 bases:

>100_bases
ACGCACCTCCAAGCTGAAACCCGCACTCAGCTTGGAGGTGTTTTTTATTACTTATAAACGGAGACGACACTCTCCCAGCC
GTCAGAACCATCTATACAGT

Product: YloA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 568; Mature: 567

Protein sequence:

>568_residues
MSFDGMFTYGMTHELNNRIAGGRITRVHQPFKHDVIFHIRANGKNHKLLLSAHPSYSRVHMTNQAYENPSEPPMFCMLLR
KHIEGGFIEKIEQAGLDRIMIFRIKSRNEIGDETVRTLYVEIMGRHSNIILTDGEGAIIDGLKHLSPSMNSYRTVLPGYD
YKLPPAQEKISPLAADEEDVLRYLSFQEGRLDQQIVRHFSGVSPLFAKEAVHRAGLANKITLPKTLIEMFHAVKDCRFTP
NITTAGGKEYFYLLSLTHVNGEERTFHSLSELLDRFYFGKAERDRVKQQAQDLERFVANERKKNANKIKKLEKTLDYSEN
AKEFQLYGELLTANLYMLKKGDKEAEVINYYDEESKTVTIPLNPNKTPSENAQMYFTKYQKAKNSVEVVKQQIRLAEEEI
AYFDQLIQQLSSASTKDIHEIREELVEGKYLRPKQQRGQKKQKQHVPVLEQYESSRGLTILVGKNNKQNEYLTTKAAARD
DLWFHTKDIPGSHVVIKSNDPDEQSILEAAAIAAYFSKAKDSGSVPVDYTKIRHVKKPNGAKPGFVTYDSQHTVFVTPDA
DLVIRLKK

Sequences:

>Translated_568_residues
MSFDGMFTYGMTHELNNRIAGGRITRVHQPFKHDVIFHIRANGKNHKLLLSAHPSYSRVHMTNQAYENPSEPPMFCMLLR
KHIEGGFIEKIEQAGLDRIMIFRIKSRNEIGDETVRTLYVEIMGRHSNIILTDGEGAIIDGLKHLSPSMNSYRTVLPGYD
YKLPPAQEKISPLAADEEDVLRYLSFQEGRLDQQIVRHFSGVSPLFAKEAVHRAGLANKITLPKTLIEMFHAVKDCRFTP
NITTAGGKEYFYLLSLTHVNGEERTFHSLSELLDRFYFGKAERDRVKQQAQDLERFVANERKKNANKIKKLEKTLDYSEN
AKEFQLYGELLTANLYMLKKGDKEAEVINYYDEESKTVTIPLNPNKTPSENAQMYFTKYQKAKNSVEVVKQQIRLAEEEI
AYFDQLIQQLSSASTKDIHEIREELVEGKYLRPKQQRGQKKQKQHVPVLEQYESSRGLTILVGKNNKQNEYLTTKAAARD
DLWFHTKDIPGSHVVIKSNDPDEQSILEAAAIAAYFSKAKDSGSVPVDYTKIRHVKKPNGAKPGFVTYDSQHTVFVTPDA
DLVIRLKK
>Mature_567_residues
SFDGMFTYGMTHELNNRIAGGRITRVHQPFKHDVIFHIRANGKNHKLLLSAHPSYSRVHMTNQAYENPSEPPMFCMLLRK
HIEGGFIEKIEQAGLDRIMIFRIKSRNEIGDETVRTLYVEIMGRHSNIILTDGEGAIIDGLKHLSPSMNSYRTVLPGYDY
KLPPAQEKISPLAADEEDVLRYLSFQEGRLDQQIVRHFSGVSPLFAKEAVHRAGLANKITLPKTLIEMFHAVKDCRFTPN
ITTAGGKEYFYLLSLTHVNGEERTFHSLSELLDRFYFGKAERDRVKQQAQDLERFVANERKKNANKIKKLEKTLDYSENA
KEFQLYGELLTANLYMLKKGDKEAEVINYYDEESKTVTIPLNPNKTPSENAQMYFTKYQKAKNSVEVVKQQIRLAEEEIA
YFDQLIQQLSSASTKDIHEIREELVEGKYLRPKQQRGQKKQKQHVPVLEQYESSRGLTILVGKNNKQNEYLTTKAAARDD
LWFHTKDIPGSHVVIKSNDPDEQSILEAAAIAAYFSKAKDSGSVPVDYTKIRHVKKPNGAKPGFVTYDSQHTVFVTPDAD
LVIRLKK

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 65042; Mature: 64911

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDGMFTYGMTHELNNRIAGGRITRVHQPFKHDVIFHIRANGKNHKLLLSAHPSYSRVH
CCCCCEEEECCHHHHCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEE
MTNQAYENPSEPPMFCMLLRKHIEGGFIEKIEQAGLDRIMIFRIKSRNEIGDETVRTLYV
ECCHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHH
EIMGRHSNIILTDGEGAIIDGLKHLSPSMNSYRTVLPGYDYKLPPAQEKISPLAADEEDV
HHHCCCCCEEEECCCCHHHHHHHHCCCCHHHCEEECCCCCCCCCCCHHHCCCCCCCHHHH
LRYLSFQEGRLDQQIVRHFSGVSPLFAKEAVHRAGLANKITLPKTLIEMFHAVKDCRFTP
HHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC
NITTAGGKEYFYLLSLTHVNGEERTFHSLSELLDRFYFGKAERDRVKQQAQDLERFVANE
CCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RKKNANKIKKLEKTLDYSENAKEFQLYGELLTANLYMLKKGDKEAEVINYYDEESKTVTI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCEEEEEECCCCCCHHHEEECCCCCEEEE
PLNPNKTPSENAQMYFTKYQKAKNSVEVVKQQIRLAEEEIAYFDQLIQQLSSASTKDIHE
EECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IREELVEGKYLRPKQQRGQKKQKQHVPVLEQYESSRGLTILVGKNNKQNEYLTTKAAARD
HHHHHHCCCCCCCHHHHCHHHHHHCCCHHHHHHCCCCEEEEEECCCCCCCEEEEHHCCCC
DLWFHTKDIPGSHVVIKSNDPDEQSILEAAAIAAYFSKAKDSGSVPVDYTKIRHVKKPNG
CCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCC
AKPGFVTYDSQHTVFVTPDADLVIRLKK
CCCCEEEECCCEEEEECCCCCEEEEECC
>Mature Secondary Structure 
SFDGMFTYGMTHELNNRIAGGRITRVHQPFKHDVIFHIRANGKNHKLLLSAHPSYSRVH
CCCCEEEECCHHHHCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEE
MTNQAYENPSEPPMFCMLLRKHIEGGFIEKIEQAGLDRIMIFRIKSRNEIGDETVRTLYV
ECCHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHH
EIMGRHSNIILTDGEGAIIDGLKHLSPSMNSYRTVLPGYDYKLPPAQEKISPLAADEEDV
HHHCCCCCEEEECCCCHHHHHHHHCCCCHHHCEEECCCCCCCCCCCHHHCCCCCCCHHHH
LRYLSFQEGRLDQQIVRHFSGVSPLFAKEAVHRAGLANKITLPKTLIEMFHAVKDCRFTP
HHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC
NITTAGGKEYFYLLSLTHVNGEERTFHSLSELLDRFYFGKAERDRVKQQAQDLERFVANE
CCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RKKNANKIKKLEKTLDYSENAKEFQLYGELLTANLYMLKKGDKEAEVINYYDEESKTVTI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCEEEEEECCCCCCHHHEEECCCCCEEEE
PLNPNKTPSENAQMYFTKYQKAKNSVEVVKQQIRLAEEEIAYFDQLIQQLSSASTKDIHE
EECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IREELVEGKYLRPKQQRGQKKQKQHVPVLEQYESSRGLTILVGKNNKQNEYLTTKAAARD
HHHHHHCCCCCCCHHHHCHHHHHHCCCHHHHHHCCCCEEEEEECCCCCCCEEEEHHCCCC
DLWFHTKDIPGSHVVIKSNDPDEQSILEAAAIAAYFSKAKDSGSVPVDYTKIRHVKKPNG
CCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCC
AKPGFVTYDSQHTVFVTPDADLVIRLKK
CCCCEEEECCCEEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]