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The map label for this gene is yjbP

Identifier: 154685598

GI number: 154685598

Start: 1140022

End: 1140771

Strand: Reverse

Name: yjbP

Synonym: RBAM_011640

Alternate gene names: 154685598

Gene position: 1140771-1140022 (Counterclockwise)

Preceding gene: 154685609

Following gene: 154685593

Centisome position: 29.11

GC content: 49.33

Gene sequence:

>750_bases
ATGGCTTATGACATCATCAGCGATATACACGGATGTTATGACGAAATGATCGCGTTAATGCAAAAGCTCGGATATGAAGT
CAAAGACGGAACGCCCGTTCACTCTGAAGACAGGACGCTTGTCTTTGCGGGGGATTTAACGGACAGAGGCCCAAAATCCG
TAGAAGTGATGCGTTTTGTGGCAAAAGCATATGAAAAAGGAGCCGTCCGTTATGTCCCGGGAAATCATTGCAACAAACTG
TATCGTTACTTAAAAGGAAACCCCGTAAAAGTGATGCACGGACTGGAAACGACGGCAGCCGAACTGAAAGAGCTGTCTCC
CGCCGACAGAACGGAAGTCTCCAGACAATTCATCCGCTTATATGAGTCAGCGCCGCTTTATGACATTTTACATAATGGCG
ATCTCGTTGTCGCCCACGCCGGCATAAAAGCTGACGATATCGGTAAATACTCGCGTAAGGTAAAAGAATTTGTTCTGTAC
GGCGATATCACGGGTGAAACGCATCCCGACGGCAGACCCGTCAGAAGAGACTGGGCCGCCGCTTATGAAGGCAAGGCATG
GATTGTTTACGGCCATACCCCGGTAAAACGCCCACGGATCGTCAACCGTACAATCAACATTGATACAGGATGCGTCTTCG
GCAATCAACTGACAGGCTTTCGCTTTCCGGAGCATGAAACCGTCTCTGTGGAAAGCTCAATGCCCTATGATGCTTCACGA
TTTCGCGAGGATCACGGAAGGCAGGCATGA

Upstream 100 bases:

>100_bases
TTCTTTAATTCTTTTTTTAATTTGTACAAAAACAGCGTAATTAGGTATAGGAATTAGCCCCATAATAAATAAAAAACCGT
TAATAAGGAGGCTGACACGA

Downstream 100 bases:

>100_bases
AAAAAAGCCCGAAACCGGCAAACGGTTCGGGCTTTACATGTGTTCAATTAATGTTTTCATATCGTCAGGCACCGGGGCGT
GAAAAACGAGCGTTTCTCCG

Product: bis(5'-nucleosyl)-tetraphosphatase PrpE

Products: NA

Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate asymmetrical hydrolase; Diadenosine tetraphosphatase

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MAYDIISDIHGCYDEMIALMQKLGYEVKDGTPVHSEDRTLVFAGDLTDRGPKSVEVMRFVAKAYEKGAVRYVPGNHCNKL
YRYLKGNPVKVMHGLETTAAELKELSPADRTEVSRQFIRLYESAPLYDILHNGDLVVAHAGIKADDIGKYSRKVKEFVLY
GDITGETHPDGRPVRRDWAAAYEGKAWIVYGHTPVKRPRIVNRTINIDTGCVFGNQLTGFRFPEHETVSVESSMPYDASR
FREDHGRQA

Sequences:

>Translated_249_residues
MAYDIISDIHGCYDEMIALMQKLGYEVKDGTPVHSEDRTLVFAGDLTDRGPKSVEVMRFVAKAYEKGAVRYVPGNHCNKL
YRYLKGNPVKVMHGLETTAAELKELSPADRTEVSRQFIRLYESAPLYDILHNGDLVVAHAGIKADDIGKYSRKVKEFVLY
GDITGETHPDGRPVRRDWAAAYEGKAWIVYGHTPVKRPRIVNRTINIDTGCVFGNQLTGFRFPEHETVSVESSMPYDASR
FREDHGRQA
>Mature_248_residues
AYDIISDIHGCYDEMIALMQKLGYEVKDGTPVHSEDRTLVFAGDLTDRGPKSVEVMRFVAKAYEKGAVRYVPGNHCNKLY
RYLKGNPVKVMHGLETTAAELKELSPADRTEVSRQFIRLYESAPLYDILHNGDLVVAHAGIKADDIGKYSRKVKEFVLYG
DITGETHPDGRPVRRDWAAAYEGKAWIVYGHTPVKRPRIVNRTINIDTGCVFGNQLTGFRFPEHETVSVESSMPYDASRF
REDHGRQA

Specific function: Asymmetrically hydrolyzes Ap4p to yield AMP and ATP

COG id: COG0639

COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prpE family

Homologues:

Organism=Escherichia coli, GI1786234, Length=142, Percent_Identity=34.5070422535211, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PRPE_BACA2 (A7Z3F2)

Other databases:

- EMBL:   CP000560
- RefSeq:   YP_001420759.1
- ProteinModelPortal:   A7Z3F2
- SMR:   A7Z3F2
- STRING:   A7Z3F2
- EnsemblBacteria:   EBBACT00000007283
- GeneID:   5459893
- GenomeReviews:   CP000560_GR
- KEGG:   bay:RBAM_011640
- eggNOG:   COG0639
- GeneTree:   EBGT00050000002430
- HOGENOM:   HBG724457
- OMA:   HCNKLYR
- ProtClustDB:   PRK13625
- BioCyc:   BAMY326423:RBAM_011640-MONOMER
- HAMAP:   MF_01443
- InterPro:   IPR004843

Pfam domain/function: PF00149 Metallophos

EC number: =3.6.1.17

Molecular weight: Translated: 28124; Mature: 27993

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYDIISDIHGCYDEMIALMQKLGYEVKDGTPVHSEDRTLVFAGDLTDRGPKSVEVMRFV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHH
AKAYEKGAVRYVPGNHCNKLYRYLKGNPVKVMHGLETTAAELKELSPADRTEVSRQFIRL
HHHHHCCCEEECCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHH
YESAPLYDILHNGDLVVAHAGIKADDIGKYSRKVKEFVLYGDITGETHPDGRPVRRDWAA
HHCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHH
AYEGKAWIVYGHTPVKRPRIVNRTINIDTGCVFGNQLTGFRFPEHETVSVESSMPYDASR
HHCCCEEEEECCCCCCCCEEEEEEEECCCCEEECCCCCCCCCCCCCEEEECCCCCCCHHH
FREDHGRQA
HHHHCCCCC
>Mature Secondary Structure 
AYDIISDIHGCYDEMIALMQKLGYEVKDGTPVHSEDRTLVFAGDLTDRGPKSVEVMRFV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHH
AKAYEKGAVRYVPGNHCNKLYRYLKGNPVKVMHGLETTAAELKELSPADRTEVSRQFIRL
HHHHHCCCEEECCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHH
YESAPLYDILHNGDLVVAHAGIKADDIGKYSRKVKEFVLYGDITGETHPDGRPVRRDWAA
HHCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHH
AYEGKAWIVYGHTPVKRPRIVNRTINIDTGCVFGNQLTGFRFPEHETVSVESSMPYDASR
HHCCCEEEEECCCCCCCCEEEEEEEECCCCEEECCCCCCCCCCCCCEEEECCCCCCCHHH
FREDHGRQA
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA