| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is yjbH [H]
Identifier: 154685590
GI number: 154685590
Start: 1134319
End: 1135221
Strand: Reverse
Name: yjbH [H]
Synonym: RBAM_011560
Alternate gene names: 154685590
Gene position: 1135221-1134319 (Counterclockwise)
Preceding gene: 154685591
Following gene: 154685589
Centisome position: 28.97
GC content: 46.29
Gene sequence:
>903_bases TTGACGAATTATCAGCATGAGCAATACTTCGCCCATTGCCACGGACATCCAAAAAAACCGCTCGAAATTTACATGTTTGT CGACCCTTTATGTCCTGAATGCTGGTCGCTGGAGCCCGCCATAAAAAAATTAAAAATCAAATACGGACGTTTTTTTACGC TGCGGATCATAGTTTCCGCGAGCATTACAACGCTGAATAAGCAAAAGCGGAAAAAACACCTCCTTGCCGAAGCTTGGGAA AAAATTGCGAACCGTTCCGGGATGCCCTGTGACGGAAGCCTTTGGCTTGAGCAGGATCAGCCTCTTTCATCGCCCTACCT TGCCGCACTCGCTTTAAAAGCGGCCGAACTGCAGGGAAGAAAAGCGGGCATTCTGTTTCTCCGCAGCATGCAGGAAAGCC TGTTTGTTTCCAAGCAGAATATTACGGATGAAGACGTTCTTTTAGAGATTGCCGAAAAGACGAAATTGGATGTTGAAGAA TTCAAGCGCGACCTCCATTCGCAAAGCGCGGTAAAAGCGCTTCAGTGCGATATGAAAATCGCGGCGGAAATGGACGTCAC CGTCAACCCGACATTGACGTTCTTTAACAGCCTGCATGATGATGAAGGGCTGAAGGTTCCCGGCAACTATTCTTATGACG TATACGAAGAGATCTTATTCGAAATGCTCGGGGATGAACCAAAACCTTCTGAAACGCCGCCTTTGGAATGTTTCATTGAA TATTTCCGGTTTGTCGCATCGAAAGAAATCGCACTCGTTTATGATTTGAGTCTAGAAGAAGTTGAAAAAGAAATGAAAAA ACTGGCATTCGCCAAAAAGGTCGCCAGAGTGGAAGCAAAGCACGGTCTGTTTTGGAAATCTCTGGCCGGCACCCAGGAGG ATGTCACCTGTTGTGATCATTAA
Upstream 100 bases:
>100_bases AGGTCGGGCTGGAGGGCGATATTCGTGAATTTCTGTACGGGCGTCTGGAACTGACGGCCAGGCATATGGTAAACCAGTCA GAAGCGGAGGATCGATCATA
Downstream 100 bases:
>100_bases AAAAAGCTGATTCCTTACGGAGCCGGCTTTTTTTGTGCAAATAAAGAAACCGCGCCGGGATAAGCGCGGTTTCATATGTC TTAACGACAACAAAGGGGAT
Product: YjbH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTNYQHEQYFAHCHGHPKKPLEIYMFVDPLCPECWSLEPAIKKLKIKYGRFFTLRIIVSASITTLNKQKRKKHLLAEAWE KIANRSGMPCDGSLWLEQDQPLSSPYLAALALKAAELQGRKAGILFLRSMQESLFVSKQNITDEDVLLEIAEKTKLDVEE FKRDLHSQSAVKALQCDMKIAAEMDVTVNPTLTFFNSLHDDEGLKVPGNYSYDVYEEILFEMLGDEPKPSETPPLECFIE YFRFVASKEIALVYDLSLEEVEKEMKKLAFAKKVARVEAKHGLFWKSLAGTQEDVTCCDH
Sequences:
>Translated_300_residues MTNYQHEQYFAHCHGHPKKPLEIYMFVDPLCPECWSLEPAIKKLKIKYGRFFTLRIIVSASITTLNKQKRKKHLLAEAWE KIANRSGMPCDGSLWLEQDQPLSSPYLAALALKAAELQGRKAGILFLRSMQESLFVSKQNITDEDVLLEIAEKTKLDVEE FKRDLHSQSAVKALQCDMKIAAEMDVTVNPTLTFFNSLHDDEGLKVPGNYSYDVYEEILFEMLGDEPKPSETPPLECFIE YFRFVASKEIALVYDLSLEEVEKEMKKLAFAKKVARVEAKHGLFWKSLAGTQEDVTCCDH >Mature_299_residues TNYQHEQYFAHCHGHPKKPLEIYMFVDPLCPECWSLEPAIKKLKIKYGRFFTLRIIVSASITTLNKQKRKKHLLAEAWEK IANRSGMPCDGSLWLEQDQPLSSPYLAALALKAAELQGRKAGILFLRSMQESLFVSKQNITDEDVLLEIAEKTKLDVEEF KRDLHSQSAVKALQCDMKIAAEMDVTVNPTLTFFNSLHDDEGLKVPGNYSYDVYEEILFEMLGDEPKPSETPPLECFIEY FRFVASKEIALVYDLSLEEVEKEMKKLAFAKKVARVEAKHGLFWKSLAGTQEDVTCCDH
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0413 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR023169 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 34362; Mature: 34231
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNYQHEQYFAHCHGHPKKPLEIYMFVDPLCPECWSLEPAIKKLKIKYGRFFTLRIIVSA CCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCHHCCCCHHHHHHHHHCCCEEEEEEEEHH SITTLNKQKRKKHLLAEAWEKIANRSGMPCDGSLWLEQDQPLSSPYLAALALKAAELQGR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCC KAGILFLRSMQESLFVSKQNITDEDVLLEIAEKTKLDVEEFKRDLHSQSAVKALQCDMKI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHH AAEMDVTVNPTLTFFNSLHDDEGLKVPGNYSYDVYEEILFEMLGDEPKPSETPPLECFIE HEEECEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH YFRFVASKEIALVYDLSLEEVEKEMKKLAFAKKVARVEAKHGLFWKSLAGTQEDVTCCDH HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure TNYQHEQYFAHCHGHPKKPLEIYMFVDPLCPECWSLEPAIKKLKIKYGRFFTLRIIVSA CCCCHHHHHHHHCCCCCCCEEEEEEECCCCCHHCCCCHHHHHHHHHCCCEEEEEEEEHH SITTLNKQKRKKHLLAEAWEKIANRSGMPCDGSLWLEQDQPLSSPYLAALALKAAELQGR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCC KAGILFLRSMQESLFVSKQNITDEDVLLEIAEKTKLDVEEFKRDLHSQSAVKALQCDMKI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHH AAEMDVTVNPTLTFFNSLHDDEGLKVPGNYSYDVYEEILFEMLGDEPKPSETPPLECFIE HEEECEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH YFRFVASKEIALVYDLSLEEVEKEMKKLAFAKKVARVEAKHGLFWKSLAGTQEDVTCCDH HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]