Definition Bacillus amyloliquefaciens FZB42, complete genome.
Accession NC_009725
Length 3,918,589

Click here to switch to the map view.

The map label for this gene is yhfM [H]

Identifier: 154685482

GI number: 154685482

Start: 1028588

End: 1028983

Strand: Reverse

Name: yhfM [H]

Synonym: RBAM_010480

Alternate gene names: 154685482

Gene position: 1028983-1028588 (Counterclockwise)

Preceding gene: 154685484

Following gene: 154685477

Centisome position: 26.26

GC content: 40.4

Gene sequence:

>396_bases
ATGAAAAAAATAATCGCGTTTATTGTAGTAATCGCCCTTTTGGTTATTGCTTTCTTCTATGTATACAGCCGGACCGGCGA
TGTGTTTCCATCAAGCAACGCAGATCTGATTATTCTGTCTGAGCACGGAAAAAAAGAAATCAAAATTAAAGACAGGCAGA
ATGTAAAAGATATGCTCGATATCTTGAACCAAGGAAAACAAGTCAAACTGACCAAAAGCGTATCTCCCGATTACGACGGA
ACGGTCAAATACCATGAAGACCGTTTCGATTCATTCAGCATGTGGCTCGAAGGCGGCAATTATATGCTGTACAAGTATAA
AAACACGTATTACAAACTGACCCGGCATGATACGAAGCTTGTGCAAAGCATCATTAAGGAAGAATCGCAGAGCTGA

Upstream 100 bases:

>100_bases
ATAAATAGAACCAAGCCTCCTAAACGGATGTTAATCTTTTCACAACAGAAAAGAATGGAACAACAGGAAGCGGGAAAGAC
TAAAAGACGGAGTGATGAAT

Downstream 100 bases:

>100_bases
CCGGATCAGCATGTAAAAGCGAAGCCCCCGGCTTCGCTTTTCGTCCGTCATTTCGGAAGCATGTCCCGGACCGCCCGCCT
CAGCAGCTTCCCGGTCGCGT

Product: YhfM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MKKIIAFIVVIALLVIAFFYVYSRTGDVFPSSNADLIILSEHGKKEIKIKDRQNVKDMLDILNQGKQVKLTKSVSPDYDG
TVKYHEDRFDSFSMWLEGGNYMLYKYKNTYYKLTRHDTKLVQSIIKEESQS

Sequences:

>Translated_131_residues
MKKIIAFIVVIALLVIAFFYVYSRTGDVFPSSNADLIILSEHGKKEIKIKDRQNVKDMLDILNQGKQVKLTKSVSPDYDG
TVKYHEDRFDSFSMWLEGGNYMLYKYKNTYYKLTRHDTKLVQSIIKEESQS
>Mature_131_residues
MKKIIAFIVVIALLVIAFFYVYSRTGDVFPSSNADLIILSEHGKKEIKIKDRQNVKDMLDILNQGKQVKLTKSVSPDYDG
TVKYHEDRFDSFSMWLEGGNYMLYKYKNTYYKLTRHDTKLVQSIIKEESQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15284; Mature: 15284

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIAFIVVIALLVIAFFYVYSRTGDVFPSSNADLIILSEHGKKEIKIKDRQNVKDMLD
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEECCCCCHHHHHH
ILNQGKQVKLTKSVSPDYDGTVKYHEDRFDSFSMWLEGGNYMLYKYKNTYYKLTRHDTKL
HHCCCCEEEEEECCCCCCCCCEEECCCCCCCEEEEEECCCEEEEEECCCEEEEEHHHHHH
VQSIIKEESQS
HHHHHHHCCCC
>Mature Secondary Structure
MKKIIAFIVVIALLVIAFFYVYSRTGDVFPSSNADLIILSEHGKKEIKIKDRQNVKDMLD
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEECCCCCHHHHHH
ILNQGKQVKLTKSVSPDYDGTVKYHEDRFDSFSMWLEGGNYMLYKYKNTYYKLTRHDTKL
HHCCCCEEEEEECCCCCCCCCEEECCCCCCCEEEEEECCCEEEEEECCCEEEEEHHHHHH
VQSIIKEESQS
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]