| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
Click here to switch to the map view.
The map label for this gene is yhaZ [H]
Identifier: 154685438
GI number: 154685438
Start: 981371
End: 982444
Strand: Reverse
Name: yhaZ [H]
Synonym: RBAM_010040
Alternate gene names: 154685438
Gene position: 982444-981371 (Counterclockwise)
Preceding gene: 154685439
Following gene: 154685435
Centisome position: 25.07
GC content: 49.26
Gene sequence:
>1074_bases ATGTCTCTATTAAAAGATATTTATAACGAAGAATTTGCAGAAGCACTTCTGAACAGAATCAAATCGGCGTATCCGGCTTT TGAGCGGGACAAGTGCCGGGCGCTGATGTTTCAGGAAGATTGGCCCGGACTGACGTTAAAACAGCGGATGCGCCGGATCA CAGACTCTTTATATGAAACACTGCCGAAGGATTACATACGGGCGCTTGACGTCTTATATGAGACAGCTCCCCACTTCTCA GGGCTCGCCGGGATTATTTTTCCCGATTATGTCCAACAGTACGGAACGGATCACTGGGACGAATCAATGAAGGCGCTTCA GTATTTCACTCGTTTTTCCACTTCCGAATTTGCGGTCCGCCCGTATATCAGGCTTGACCGGGAGCGGATGTTCAAAGAGT TCCTTTCCTGGACGGAGCATCCGGACGAACATGTCAGAAGGCTTGCCAGCGAAGGGTCAAGACCGCGCCTGCCATGGGGA ATCTCCATTCCGGCTCTTCTTGACGATCCTTCCCCGATTCTCCCTGTTCTGGACCGCTTGATGCAGGATGACTCGTTATA TGTCAGAAAAAGCGTGGCGAATAACCTGAATGACATCTCCAAAACACATCCGGATCTTCTGGCACAGATCGCAGCCGAGC GGTTCGGAAGCTGTCCGCACACGGACTGGATTTTGAAGCACGCCTGCAGGACACTGTTAAAAAGAGGAGACAAACAGGCG CTTGCGGTTTTCGGGTTTGAAGACGCCTCCCGGATTTCATTGGAACGTTTTACACTGAATTCGGAAACGGCCGCCATCGG AACAAGCATACATTTTTCTTTTCAGATCCGCTCATCCGCCCGGCAAAAAGTCAGGGTTGAATACGCGATTGATTTTGTAA AGAAAAGGGGGCACCGCAGCCGCAAGGTGTTTAAGATGTCGGAGTCCGCCATGGATAACGGAGACGTAAAAGCCTTCAGC AAACATCATTCCCTTAAAGATTTAACCACCCGCAAGCATTATCGGGGAATTCACACTCTGTCTGTCATCATTAACGGAAC GGTAAAAGGTTCGCTTGATTTTTCTGTTGAATAA
Upstream 100 bases:
>100_bases TAACTAAAAAAATTAGAGGAAATATCTATGCTGAATGTATGATAAAGTTGAAAGAGAACATACATTCTCATATAATAAAA GAAAAAAAGCGGTGACTGTC
Downstream 100 bases:
>100_bases AAAAACCCCTCCATTTCATAGATGGAGGGGTGTGGAGCTTATTGCTGGCTGCCGTAAAGCTCTTCAAGAGGTTTCATAAT GATTTTGTTTAACTCGCCGA
Product: YhaZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MSLLKDIYNEEFAEALLNRIKSAYPAFERDKCRALMFQEDWPGLTLKQRMRRITDSLYETLPKDYIRALDVLYETAPHFS GLAGIIFPDYVQQYGTDHWDESMKALQYFTRFSTSEFAVRPYIRLDRERMFKEFLSWTEHPDEHVRRLASEGSRPRLPWG ISIPALLDDPSPILPVLDRLMQDDSLYVRKSVANNLNDISKTHPDLLAQIAAERFGSCPHTDWILKHACRTLLKRGDKQA LAVFGFEDASRISLERFTLNSETAAIGTSIHFSFQIRSSARQKVRVEYAIDFVKKRGHRSRKVFKMSESAMDNGDVKAFS KHHSLKDLTTRKHYRGIHTLSVIINGTVKGSLDFSVE
Sequences:
>Translated_357_residues MSLLKDIYNEEFAEALLNRIKSAYPAFERDKCRALMFQEDWPGLTLKQRMRRITDSLYETLPKDYIRALDVLYETAPHFS GLAGIIFPDYVQQYGTDHWDESMKALQYFTRFSTSEFAVRPYIRLDRERMFKEFLSWTEHPDEHVRRLASEGSRPRLPWG ISIPALLDDPSPILPVLDRLMQDDSLYVRKSVANNLNDISKTHPDLLAQIAAERFGSCPHTDWILKHACRTLLKRGDKQA LAVFGFEDASRISLERFTLNSETAAIGTSIHFSFQIRSSARQKVRVEYAIDFVKKRGHRSRKVFKMSESAMDNGDVKAFS KHHSLKDLTTRKHYRGIHTLSVIINGTVKGSLDFSVE >Mature_356_residues SLLKDIYNEEFAEALLNRIKSAYPAFERDKCRALMFQEDWPGLTLKQRMRRITDSLYETLPKDYIRALDVLYETAPHFSG LAGIIFPDYVQQYGTDHWDESMKALQYFTRFSTSEFAVRPYIRLDRERMFKEFLSWTEHPDEHVRRLASEGSRPRLPWGI SIPALLDDPSPILPVLDRLMQDDSLYVRKSVANNLNDISKTHPDLLAQIAAERFGSCPHTDWILKHACRTLLKRGDKQAL AVFGFEDASRISLERFTLNSETAAIGTSIHFSFQIRSSARQKVRVEYAIDFVKKRGHRSRKVFKMSESAMDNGDVKAFSK HHSLKDLTTRKHYRGIHTLSVIINGTVKGSLDFSVE
Specific function: Unknown
COG id: COG4335
COG function: function code L; DNA alkylation repair enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HEAT repeat [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011989 - InterPro: IPR016024 - InterPro: IPR000357 - InterPro: IPR021133 [H]
Pfam domain/function: PF02985 HEAT [H]
EC number: NA
Molecular weight: Translated: 41269; Mature: 41137
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS50077 HEAT_REPEAT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLKDIYNEEFAEALLNRIKSAYPAFERDKCRALMFQEDWPGLTLKQRMRRITDSLYET CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHH LPKDYIRALDVLYETAPHFSGLAGIIFPDYVQQYGTDHWDESMKALQYFTRFSTSEFAVR CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEC PYIRLDRERMFKEFLSWTEHPDEHVRRLASEGSRPRLPWGISIPALLDDPSPILPVLDRL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCHHHHHHHH MQDDSLYVRKSVANNLNDISKTHPDLLAQIAAERFGSCPHTDWILKHACRTLLKRGDKQA HCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCE LAVFGFEDASRISLERFTLNSETAAIGTSIHFSFQIRSSARQKVRVEYAIDFVKKRGHRS EEEECCCCCCHHHHHHEECCCCHHEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCHH RKVFKMSESAMDNGDVKAFSKHHSLKDLTTRKHYRGIHTLSVIINGTVKGSLDFSVE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCEECCCCCCCC >Mature Secondary Structure SLLKDIYNEEFAEALLNRIKSAYPAFERDKCRALMFQEDWPGLTLKQRMRRITDSLYET CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHH LPKDYIRALDVLYETAPHFSGLAGIIFPDYVQQYGTDHWDESMKALQYFTRFSTSEFAVR CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEC PYIRLDRERMFKEFLSWTEHPDEHVRRLASEGSRPRLPWGISIPALLDDPSPILPVLDRL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCHHHHHHHH MQDDSLYVRKSVANNLNDISKTHPDLLAQIAAERFGSCPHTDWILKHACRTLLKRGDKQA HCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCE LAVFGFEDASRISLERFTLNSETAAIGTSIHFSFQIRSSARQKVRVEYAIDFVKKRGHRS EEEECCCCCCHHHHHHEECCCCHHEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCHH RKVFKMSESAMDNGDVKAFSKHHSLKDLTTRKHYRGIHTLSVIINGTVKGSLDFSVE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]