Definition Bacillus amyloliquefaciens FZB42, complete genome.
Accession NC_009725
Length 3,918,589

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The map label for this gene is yheD [H]

Identifier: 154685434

GI number: 154685434

Start: 977086

End: 978444

Strand: Reverse

Name: yheD [H]

Synonym: RBAM_010000

Alternate gene names: 154685434

Gene position: 978444-977086 (Counterclockwise)

Preceding gene: 154685435

Following gene: 154685433

Centisome position: 24.97

GC content: 49.15

Gene sequence:

>1359_bases
GTGAATCATAAAGGGATGATTGTCGGCATCGATAAAAAAAGCAAAAATACGCTGTTTCTCCCCTCCTCCATGAAACGGGA
AGGGCTTTTATCCGCTGCCTTCGGGACCAAGGTTGTCAAATGCCGTGTAGCCTTTTCTCAATCACTTGAAAAAAGCGCGC
TCCTTTCTGAAGATTTGTTTGAGGAGCTGTTGATACCGCATAAAAGCCGGGCTGACTTTCTCATACACGGCCAGACGGTG
CACATCGGACCGCTGATCGGCGTTTTCACAGCCGGGTTCACATCATCGCCGTCCCGCCCGTTAAGAGACCGTACAGCCTT
CTTTTCCAAGATGCTCTCTCTTCATGAACAGGCGAACGGATATTGTTTCGTTTTCGGGGCCCATCAGATCAACTGGGAAG
AAGGCACCGTCCAAGCGCTGATTTATAAAGAAAACAGCTGGAAACGGACGGCCGTCCCGCTTCCGAATGTCGTATATGAC
AGGCTCCCGAGCCGAAAAACGGAAGAAGTTCCGCTTTTACAGCAGACAAAACAAAGGCTGATGAATGACTATCAGATTCC
ATGGTTTAATCCGCAATTCTTTAATAAATGGGACATTCATAAGCTTCTGGAAAAAAACAGTCTCACCGCTTCACTTCTGC
CAAAATCTGTCCTGCACCCGAATGCAGAAGCGTTAGAAACGTTATGCAGCACGTTTGACACCGTCTATATCAAACCTGCA
GACGGCGCACTCGGAACGGGGATTTACAAGGTGGAAAAAACAGATGCCGGCTTATCTGTCAAACACACGAATGAGGAAAA
AACGGTGGTGACGGCAGAGTATTCAGATGCGGCATCCTTCATGACATCATTTAAAGAAAACAATGACCCGTCCGCATTTT
TAATTCAGCAAGGCATTGACCTGATCCGGCTGGATGGGCGCCCCGTCGATTTCAGGGTGCACACGAATAAAAACGCCGAG
GGGAAATGGACAGTGACGGCCATTGCGGCAAAAATTTCCGGTGAAAACAGCATCACGACGCATCTGGCAACCGGCGGAGA
AGTCAGGACGTTAGCTGAATTATACGGCGATCCGCGCGAGAGAGTCGGCATGATGCGGAAACTTTCAAAAGCCGCCTTGG
CGGTCAGCCGCGTGTTAAATGAGCACATTGAAGGTTTTATCGGCGAAATCGGTTTTGACCTCGGCGTCGATCATTCAGGG
AAAGTTTGGATGTTTGAAGCCAATTCCCGCCCCGGGCGCAGCATTTTTTCCCATCCGAAGCTGAAATCGGTCGATTACCT
GACAAAACGGAGAAATTTTGAATACGCGTCGTATTTATCAGAACGGTCCATCACCGCCCCGGAAAAACTTTGGCGGTGA

Upstream 100 bases:

>100_bases
TTAAGCGTGGCTCCGGAGGCGAAAGAGGATTTGTATACGAGTCCGCTGAGACGCTTCCGCGAACTTCAGTCACAGGAAAG
CCGGAAAGGAGTATTACCGC

Downstream 100 bases:

>100_bases
GGCTGTCTTTTTTTAGGTTTACCCGGGACAGGCATTGAACGATGAGCTACAATGAACAAGATCAACATTTCCCATAAGGA
GCGTGAACGTCATGATTTCG

Product: YheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MNHKGMIVGIDKKSKNTLFLPSSMKREGLLSAAFGTKVVKCRVAFSQSLEKSALLSEDLFEELLIPHKSRADFLIHGQTV
HIGPLIGVFTAGFTSSPSRPLRDRTAFFSKMLSLHEQANGYCFVFGAHQINWEEGTVQALIYKENSWKRTAVPLPNVVYD
RLPSRKTEEVPLLQQTKQRLMNDYQIPWFNPQFFNKWDIHKLLEKNSLTASLLPKSVLHPNAEALETLCSTFDTVYIKPA
DGALGTGIYKVEKTDAGLSVKHTNEEKTVVTAEYSDAASFMTSFKENNDPSAFLIQQGIDLIRLDGRPVDFRVHTNKNAE
GKWTVTAIAAKISGENSITTHLATGGEVRTLAELYGDPRERVGMMRKLSKAALAVSRVLNEHIEGFIGEIGFDLGVDHSG
KVWMFEANSRPGRSIFSHPKLKSVDYLTKRRNFEYASYLSERSITAPEKLWR

Sequences:

>Translated_452_residues
MNHKGMIVGIDKKSKNTLFLPSSMKREGLLSAAFGTKVVKCRVAFSQSLEKSALLSEDLFEELLIPHKSRADFLIHGQTV
HIGPLIGVFTAGFTSSPSRPLRDRTAFFSKMLSLHEQANGYCFVFGAHQINWEEGTVQALIYKENSWKRTAVPLPNVVYD
RLPSRKTEEVPLLQQTKQRLMNDYQIPWFNPQFFNKWDIHKLLEKNSLTASLLPKSVLHPNAEALETLCSTFDTVYIKPA
DGALGTGIYKVEKTDAGLSVKHTNEEKTVVTAEYSDAASFMTSFKENNDPSAFLIQQGIDLIRLDGRPVDFRVHTNKNAE
GKWTVTAIAAKISGENSITTHLATGGEVRTLAELYGDPRERVGMMRKLSKAALAVSRVLNEHIEGFIGEIGFDLGVDHSG
KVWMFEANSRPGRSIFSHPKLKSVDYLTKRRNFEYASYLSERSITAPEKLWR
>Mature_452_residues
MNHKGMIVGIDKKSKNTLFLPSSMKREGLLSAAFGTKVVKCRVAFSQSLEKSALLSEDLFEELLIPHKSRADFLIHGQTV
HIGPLIGVFTAGFTSSPSRPLRDRTAFFSKMLSLHEQANGYCFVFGAHQINWEEGTVQALIYKENSWKRTAVPLPNVVYD
RLPSRKTEEVPLLQQTKQRLMNDYQIPWFNPQFFNKWDIHKLLEKNSLTASLLPKSVLHPNAEALETLCSTFDTVYIKPA
DGALGTGIYKVEKTDAGLSVKHTNEEKTVVTAEYSDAASFMTSFKENNDPSAFLIQQGIDLIRLDGRPVDFRVHTNKNAE
GKWTVTAIAAKISGENSITTHLATGGEVRTLAELYGDPRERVGMMRKLSKAALAVSRVLNEHIEGFIGEIGFDLGVDHSG
KVWMFEANSRPGRSIFSHPKLKSVDYLTKRRNFEYASYLSERSITAPEKLWR

Specific function: Involved in sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Forespore outer membrane; Peripheral membrane protein. Spore wall, spore coat. Note=Forms two rings around the forespore that are offset from its midpoint, before it eventually redistributes to form a shell around the developing spore [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yheC/yheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013816 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50742; Mature: 50742

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHKGMIVGIDKKSKNTLFLPSSMKREGLLSAAFGTKVVKCRVAFSQSLEKSALLSEDLF
CCCCCEEEEECCCCCCEEECCCCCCHHCCHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHH
EELLIPHKSRADFLIHGQTVHIGPLIGVFTAGFTSSPSRPLRDRTAFFSKMLSLHEQANG
HHHCCCCCCCCCEEEECCEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
YCFVFGAHQINWEEGTVQALIYKENSWKRTAVPLPNVVYDRLPSRKTEEVPLLQQTKQRL
EEEEEECEEECCCCCCEEEEEEECCCCCEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHH
MNDYQIPWFNPQFFNKWDIHKLLEKNSLTASLLPKSVLHPNAEALETLCSTFDTVYIKPA
HHCCCCCCCCHHHCCCHHHHHHHHHCCCCHHHCCHHHCCCCHHHHHHHHHCCCEEEEEEC
DGALGTGIYKVEKTDAGLSVKHTNEEKTVVTAEYSDAASFMTSFKENNDPSAFLIQQGID
CCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECHHHHHHHHHHHCCCCCCEEEECCCCC
LIRLDGRPVDFRVHTNKNAEGKWTVTAIAAKISGENSITTHLATGGEVRTLAELYGDPRE
EEEECCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEEECCCHHHHHHHHHCCHHH
RVGMMRKLSKAALAVSRVLNEHIEGFIGEIGFDLGVDHSGKVWMFEANSRPGRSIFSHPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHCCCC
LKSVDYLTKRRNFEYASYLSERSITAPEKLWR
CCHHHHHHHHCCCHHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure
MNHKGMIVGIDKKSKNTLFLPSSMKREGLLSAAFGTKVVKCRVAFSQSLEKSALLSEDLF
CCCCCEEEEECCCCCCEEECCCCCCHHCCHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHH
EELLIPHKSRADFLIHGQTVHIGPLIGVFTAGFTSSPSRPLRDRTAFFSKMLSLHEQANG
HHHCCCCCCCCCEEEECCEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
YCFVFGAHQINWEEGTVQALIYKENSWKRTAVPLPNVVYDRLPSRKTEEVPLLQQTKQRL
EEEEEECEEECCCCCCEEEEEEECCCCCEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHH
MNDYQIPWFNPQFFNKWDIHKLLEKNSLTASLLPKSVLHPNAEALETLCSTFDTVYIKPA
HHCCCCCCCCHHHCCCHHHHHHHHHCCCCHHHCCHHHCCCCHHHHHHHHHCCCEEEEEEC
DGALGTGIYKVEKTDAGLSVKHTNEEKTVVTAEYSDAASFMTSFKENNDPSAFLIQQGID
CCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECHHHHHHHHHHHCCCCCCEEEECCCCC
LIRLDGRPVDFRVHTNKNAEGKWTVTAIAAKISGENSITTHLATGGEVRTLAELYGDPRE
EEEECCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEEECCCHHHHHHHHHCCHHH
RVGMMRKLSKAALAVSRVLNEHIEGFIGEIGFDLGVDHSGKVWMFEANSRPGRSIFSHPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHCCCC
LKSVDYLTKRRNFEYASYLSERSITAPEKLWR
CCHHHHHHHHCCCHHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]