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The map label for this gene is sspB

Identifier: 154685432

GI number: 154685432

Start: 976357

End: 976563

Strand: Reverse

Name: sspB

Synonym: RBAM_009980

Alternate gene names: NA

Gene position: 976563-976357 (Counterclockwise)

Preceding gene: 154685433

Following gene: 154685431

Centisome position: 24.92

GC content: 46.38

Gene sequence:

>207_bases
ATGGCAAACAACAACTCTTCAAACCAACTAGTAGTACCCGGCGCTGCTCAAGCAATCGACCAAATGAAATACGAAATTGC
TTCTGAGTTCGGCGTAAACCTTGGCGGAGAAACAACTTCTCGTGCAAACGGTTCTGTCGGAGGAGAAATCACTAAACGTT
TAGTATCTTTCGCACAGCAGAACATGGGCGGCCAAGGCGTACAATAA

Upstream 100 bases:

>100_bases
TGGGTGAAGCCGAGCTGGCAATGGTTTTCGTTCCGAAAATCATCGGCTGGTGCAATTCCAGCAAACCCAACCATACTACT
TTATAAAGGAGATCATACAA

Downstream 100 bases:

>100_bases
CTCAATAAATGGCTTACAGAAGGCGCGGGATACCGCGTCTTCTTTTATGCCGTCACCCTTTTTTCCTATTCCACATACCC
TAGGAAAAAAGGAGGGAAAA

Product: SspB

Products: NA

Alternate protein names: SASP-2 [H]

Number of amino acids: Translated: 68; Mature: 67

Protein sequence:

>68_residues
MANNNSSNQLVVPGAAQAIDQMKYEIASEFGVNLGGETTSRANGSVGGEITKRLVSFAQQNMGGQGVQ

Sequences:

>Translated_68_residues
MANNNSSNQLVVPGAAQAIDQMKYEIASEFGVNLGGETTSRANGSVGGEITKRLVSFAQQNMGGQGVQ
>Mature_67_residues
ANNNSSNQLVVPGAAQAIDQMKYEIASEFGVNLGGETTSRANGSVGGEITKRLVSFAQQNMGGQGVQ

Specific function: SASP are bound to spore DNA. They are double-stranded DNA-binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to U

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alpha/beta-type SASP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001448
- InterPro:   IPR018126 [H]

Pfam domain/function: PF00269 SASP [H]

EC number: NA

Molecular weight: Translated: 7030; Mature: 6899

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00304 SASP_1 ; PS00684 SASP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANNNSSNQLVVPGAAQAIDQMKYEIASEFGVNLGGETTSRANGSVGGEITKRLVSFAQQ
CCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
NMGGQGVQ
CCCCCCCC
>Mature Secondary Structure 
ANNNSSNQLVVPGAAQAIDQMKYEIASEFGVNLGGETTSRANGSVGGEITKRLVSFAQQ
CCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
NMGGQGVQ
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA