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The map label for this gene is ygaE [H]

Identifier: 154685333

GI number: 154685333

Start: 870716

End: 871780

Strand: Reverse

Name: ygaE [H]

Synonym: RBAM_008790

Alternate gene names: 154685333

Gene position: 871780-870716 (Counterclockwise)

Preceding gene: 154685334

Following gene: 154685327

Centisome position: 22.25

GC content: 44.13

Gene sequence:

>1065_bases
ATGAAACTTGGTGCCCGCATTTTTAAAACAGGGATTGCGATTACGCTCGCGCTCTACTTAGCATCATGGATCGGACTTCC
GTCGCCGATCTTTGCCGGGATTGCAGCTATATTTGCCATACAGCCCTCTATTTACAGGTCTTTTCTTATCATTATTGATC
AGGTTCAGGCAAATATCATCGGCGCTGTCATCGCTACGGCATTCGGACTGATTTTCGGACCGAGTCCGATTATGATCGGA
TTGACCGCAGTGATTGTCATCACGATCATGTTAAAACTGAAAATTGAACACACCATTTCGATTGCGCTCGTGACGGTTAT
CGCAATTTTAGAAACACCGGGAAACAGCTTCCTGACGTTCGCTCTGATACGAACAAGCACCGTTATTTTAGGCGTGCTGT
CTTCTTTTATTGTGAACCTTGTGTTTCTTCCGCCGAAATACGAAACGAAGCTGACTCATCATACGGTTGAATATACCGAT
GAGATCATGAAATGGATCAGGCTGACGATGCGTCAGTCCACGGAACACTCGATATTGAAAGAGGATATTGAGAAGCTGAA
GGAAAAGATGATGAAGCTTGATCATACGTACCTTCTTTATAAAGAGGAGAGAAGCTACTTTAAGAAAACGACGTATGTAA
AGTCGCGCAAGCTTGTATTGTTCAGACAGGCGATTATTACGGCGAATCGGGCGCTTGACACGCTGAAAAAGCTGCACCGC
TATGAAAACGAGATTTATCATATGGCGGAGGAATTTCAGGAGACGCTGACAGAAGAAATTGATTATCTGCTTCATTGGCA
TGAAAGGATTCTGATGCGGACGGTCGGCAAGATCAAACCGCATGATGACGATGCTGAAGAAAGCATAAGATATAAACAGC
TTTTGACGAAGTCTTTCTTGAAAAATCAGCAGAACTGCGAGGATGAACTGCTTGATTACAATATGCTCAGCATTATGGCT
GCGGTTGCGGAATACCGCGAGCAGCTGGAGCATCTCGATACATTAATTACGAGTTTTCAGACATACCACCCGAAAGACAG
CGAATTAGAAACAGACGAAGAGTAA

Upstream 100 bases:

>100_bases
ATTACTTTATTGTTTAGCAAATCAGACGACAGGGAAATGTAAGTGTCAGCCGTTCGTTCGGCACATAATTTATTAGAGAA
AGGAATGCACGCACAAACCA

Downstream 100 bases:

>100_bases
CCCGGTGCTTCCGTAAAACCGGGTTTTTTTGCATTCAAAAAAACTTATGCCGCCCATTCGGACGGCATAAGTTTTTGTAT
CAGTTCAAATTCTGAATCGT

Product: YgaE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MKLGARIFKTGIAITLALYLASWIGLPSPIFAGIAAIFAIQPSIYRSFLIIIDQVQANIIGAVIATAFGLIFGPSPIMIG
LTAVIVITIMLKLKIEHTISIALVTVIAILETPGNSFLTFALIRTSTVILGVLSSFIVNLVFLPPKYETKLTHHTVEYTD
EIMKWIRLTMRQSTEHSILKEDIEKLKEKMMKLDHTYLLYKEERSYFKKTTYVKSRKLVLFRQAIITANRALDTLKKLHR
YENEIYHMAEEFQETLTEEIDYLLHWHERILMRTVGKIKPHDDDAEESIRYKQLLTKSFLKNQQNCEDELLDYNMLSIMA
AVAEYREQLEHLDTLITSFQTYHPKDSELETDEE

Sequences:

>Translated_354_residues
MKLGARIFKTGIAITLALYLASWIGLPSPIFAGIAAIFAIQPSIYRSFLIIIDQVQANIIGAVIATAFGLIFGPSPIMIG
LTAVIVITIMLKLKIEHTISIALVTVIAILETPGNSFLTFALIRTSTVILGVLSSFIVNLVFLPPKYETKLTHHTVEYTD
EIMKWIRLTMRQSTEHSILKEDIEKLKEKMMKLDHTYLLYKEERSYFKKTTYVKSRKLVLFRQAIITANRALDTLKKLHR
YENEIYHMAEEFQETLTEEIDYLLHWHERILMRTVGKIKPHDDDAEESIRYKQLLTKSFLKNQQNCEDELLDYNMLSIMA
AVAEYREQLEHLDTLITSFQTYHPKDSELETDEE
>Mature_354_residues
MKLGARIFKTGIAITLALYLASWIGLPSPIFAGIAAIFAIQPSIYRSFLIIIDQVQANIIGAVIATAFGLIFGPSPIMIG
LTAVIVITIMLKLKIEHTISIALVTVIAILETPGNSFLTFALIRTSTVILGVLSSFIVNLVFLPPKYETKLTHHTVEYTD
EIMKWIRLTMRQSTEHSILKEDIEKLKEKMMKLDHTYLLYKEERSYFKKTTYVKSRKLVLFRQAIITANRALDTLKKLHR
YENEIYHMAEEFQETLTEEIDYLLHWHERILMRTVGKIKPHDDDAEESIRYKQLLTKSFLKNQQNCEDELLDYNMLSIMA
AVAEYREQLEHLDTLITSFQTYHPKDSELETDEE

Specific function: Unknown

COG id: COG4129

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0421 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010343 [H]

Pfam domain/function: PF06081 DUF939 [H]

EC number: NA

Molecular weight: Translated: 40833; Mature: 40833

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGARIFKTGIAITLALYLASWIGLPSPIFAGIAAIFAIQPSIYRSFLIIIDQVQANII
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
GAVIATAFGLIFGPSPIMIGLTAVIVITIMLKLKIEHTISIALVTVIAILETPGNSFLTF
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ALIRTSTVILGVLSSFIVNLVFLPPKYETKLTHHTVEYTDEIMKWIRLTMRQSTEHSILK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
EDIEKLKEKMMKLDHTYLLYKEERSYFKKTTYVKSRKLVLFRQAIITANRALDTLKKLHR
HHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YENEIYHMAEEFQETLTEEIDYLLHWHERILMRTVGKIKPHDDDAEESIRYKQLLTKSFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
KNQQNCEDELLDYNMLSIMAAVAEYREQLEHLDTLITSFQTYHPKDSELETDEE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKLGARIFKTGIAITLALYLASWIGLPSPIFAGIAAIFAIQPSIYRSFLIIIDQVQANII
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
GAVIATAFGLIFGPSPIMIGLTAVIVITIMLKLKIEHTISIALVTVIAILETPGNSFLTF
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ALIRTSTVILGVLSSFIVNLVFLPPKYETKLTHHTVEYTDEIMKWIRLTMRQSTEHSILK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
EDIEKLKEKMMKLDHTYLLYKEERSYFKKTTYVKSRKLVLFRQAIITANRALDTLKKLHR
HHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YENEIYHMAEEFQETLTEEIDYLLHWHERILMRTVGKIKPHDDDAEESIRYKQLLTKSFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
KNQQNCEDELLDYNMLSIMAAVAEYREQLEHLDTLITSFQTYHPKDSELETDEE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]