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The map label for this gene is ybfJ [H]

Identifier: 154685316

GI number: 154685316

Start: 856412

End: 856801

Strand: Reverse

Name: ybfJ [H]

Synonym: RBAM_008620

Alternate gene names: 154685316

Gene position: 856801-856412 (Counterclockwise)

Preceding gene: 154685317

Following gene: 154685312

Centisome position: 21.87

GC content: 49.49

Gene sequence:

>390_bases
GTGTATTCGACAACATTCAATATTGGTCAAATCAATAAAGCTTTTGTTTTCTTTCTCGCGGCGGCCGTTTTATGCGGATG
CGGCAAAGCGGACGATTCCGCCGCCAAAAAAGCATTGCCCGTTACGCTCCATGTTGAGGATGCAGACGGTTCACCGGCGG
CCGGTGTGACGGTCACCGTGATGAAAGCGGCGGAGTCAGATCATCAGCCGAATATAGACCGCGGAGAGATAATAGGCAAG
ACTGATCACCACGGCGAGATTGCATGGAAAAGCGGCGCGAAAGGAACCTATGCCGTCGTTTTTGAAAAAGACGGAGTACC
GGAAACCCGGAATATTTCCTTAGCCGAGAGTGATAAACATACGGTGATCAGCATTACATTGAAACAATGA

Upstream 100 bases:

>100_bases
TCGCCCGTTTACCGCAATTACAGCGACACCGGCCAGACCGCCATTGCCATTCATACAAACGGCGGGTCGTCTTACAATCT
GGGAACAAGGGTGACAAACA

Downstream 100 bases:

>100_bases
AAAAAGCTTGCAGGCGGAATATCCCCTGCAAGCTTTTTGTTATCCTTTATGCACTTGGTATTCATAAACATCTTTCTTCT
CAGACAGATGAGCGAACGTG

Product: YbfJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MYSTTFNIGQINKAFVFFLAAAVLCGCGKADDSAAKKALPVTLHVEDADGSPAAGVTVTVMKAAESDHQPNIDRGEIIGK
TDHHGEIAWKSGAKGTYAVVFEKDGVPETRNISLAESDKHTVISITLKQ

Sequences:

>Translated_129_residues
MYSTTFNIGQINKAFVFFLAAAVLCGCGKADDSAAKKALPVTLHVEDADGSPAAGVTVTVMKAAESDHQPNIDRGEIIGK
TDHHGEIAWKSGAKGTYAVVFEKDGVPETRNISLAESDKHTVISITLKQ
>Mature_129_residues
MYSTTFNIGQINKAFVFFLAAAVLCGCGKADDSAAKKALPVTLHVEDADGSPAAGVTVTVMKAAESDHQPNIDRGEIIGK
TDHHGEIAWKSGAKGTYAVVFEKDGVPETRNISLAESDKHTVISITLKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003344
- InterPro:   IPR019730 [H]

Pfam domain/function: PF10794 DUF2606 [H]

EC number: NA

Molecular weight: Translated: 13644; Mature: 13644

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSTTFNIGQINKAFVFFLAAAVLCGCGKADDSAAKKALPVTLHVEDADGSPAAGVTVTV
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEEEECCCCCCCCCEEEEE
MKAAESDHQPNIDRGEIIGKTDHHGEIAWKSGAKGTYAVVFEKDGVPETRNISLAESDKH
EECCCCCCCCCCCCCEEECCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCEEEECCCCE
TVISITLKQ
EEEEEEECC
>Mature Secondary Structure
MYSTTFNIGQINKAFVFFLAAAVLCGCGKADDSAAKKALPVTLHVEDADGSPAAGVTVTV
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEEEECCCCCCCCCEEEEE
MKAAESDHQPNIDRGEIIGKTDHHGEIAWKSGAKGTYAVVFEKDGVPETRNISLAESDKH
EECCCCCCCCCCCCCEEECCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCEEEECCCCE
TVISITLKQ
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]