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The map label for this gene is yerO [H]

Identifier: 154685165

GI number: 154685165

Start: 692237

End: 693085

Strand: Reverse

Name: yerO [H]

Synonym: RBAM_007100

Alternate gene names: 154685165

Gene position: 693085-692237 (Counterclockwise)

Preceding gene: 154685174

Following gene: 154685161

Centisome position: 17.69

GC content: 42.99

Gene sequence:

>849_bases
ATGAACGAAAAAAAAGAGAAAATCATAAAAACAGGCATCCATTTATTTGCCAAAAAAGGGTTTTCTTCAACAACCATTCA
GGAAATCGCCGGTGAATGCGGAATTTCAAAAGGGGCCTTCTATCTCCATTTCAAATCAAAAGAAGACCTTTTGCTCTCAG
CATGTGAGTATTACATCGGCATGTCTATGGAAGAAATAAAGAAAATCAAAACAGAACATCAGCATAAACCGCCTAAGGAC
GTATTCCGAAAACAAATCGCATATCAATTCCAGGAATTTATGGAACACAAGGACTTTATCATTCTCTTGCTGAGCGAAAA
GGTCATTCCTGAAAATCAAAAGGTCAAACAGTATTTTCATGAGGCCAATATTCAATTTAACATGCTGTATCGGGATGCGT
TGCTCTCCGTTTACGGAGATGCCGTCACACCGTTTTTAGCGGATGCGTCCGTTATGGCGCAAGGAATTGTGAGCTCCTAT
ATTCATTTCTTGATTTTTAATGAACATACGGCATTCCGGACGGAAAACGTGGCGGCCTTTCTGATTGCCAGAATCGATGA
TCTGATTACGGGACTGATAAGAGACAATCCCGATCCGCTGCTGCCTGAGGATATCTTCACTCAGCCCGCGGCGGACAGAG
AAAGACTGCTTGCGGATATTCAAAAGATAAAAGCACAGCAGGGGCTGCCTGAGGACGTCCTCGTATCGCTTGAAGTCATT
GAAGAGGAATGTGCAAAGGAAGAGCCGCGAAAACCGATTATTAAAGGAATGCTGTCCAACTTGGCAGGCAGCGGAAATGA
GCAGATTGAAACGCTGCGGGCTTCCATTGAAACCTATTTCATCTTATAA

Upstream 100 bases:

>100_bases
ACTGGTCATTCTATATAATACTAAACGGTATAACTCAACATCGTCAACTAATAAGGCAGTAAATTTTTCTAAATTTTTCA
GGATTAAGGGGAAGCACGTC

Downstream 100 bases:

>100_bases
AAAAAGAGACCGGCGCTTACCGGTCTCCGTGTCAGCAGCGCCCTTAGAGGCGGCTGCTTTTTTTTATCGTTTTTTGATTT
CTTCAAGTAAGATCTTGTTG

Product: YerO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MNEKKEKIIKTGIHLFAKKGFSSTTIQEIAGECGISKGAFYLHFKSKEDLLLSACEYYIGMSMEEIKKIKTEHQHKPPKD
VFRKQIAYQFQEFMEHKDFIILLLSEKVIPENQKVKQYFHEANIQFNMLYRDALLSVYGDAVTPFLADASVMAQGIVSSY
IHFLIFNEHTAFRTENVAAFLIARIDDLITGLIRDNPDPLLPEDIFTQPAADRERLLADIQKIKAQQGLPEDVLVSLEVI
EEECAKEEPRKPIIKGMLSNLAGSGNEQIETLRASIETYFIL

Sequences:

>Translated_282_residues
MNEKKEKIIKTGIHLFAKKGFSSTTIQEIAGECGISKGAFYLHFKSKEDLLLSACEYYIGMSMEEIKKIKTEHQHKPPKD
VFRKQIAYQFQEFMEHKDFIILLLSEKVIPENQKVKQYFHEANIQFNMLYRDALLSVYGDAVTPFLADASVMAQGIVSSY
IHFLIFNEHTAFRTENVAAFLIARIDDLITGLIRDNPDPLLPEDIFTQPAADRERLLADIQKIKAQQGLPEDVLVSLEVI
EEECAKEEPRKPIIKGMLSNLAGSGNEQIETLRASIETYFIL
>Mature_282_residues
MNEKKEKIIKTGIHLFAKKGFSSTTIQEIAGECGISKGAFYLHFKSKEDLLLSACEYYIGMSMEEIKKIKTEHQHKPPKD
VFRKQIAYQFQEFMEHKDFIILLLSEKVIPENQKVKQYFHEANIQFNMLYRDALLSVYGDAVTPFLADASVMAQGIVSSY
IHFLIFNEHTAFRTENVAAFLIARIDDLITGLIRDNPDPLLPEDIFTQPAADRERLLADIQKIKAQQGLPEDVLVSLEVI
EEECAKEEPRKPIIKGMLSNLAGSGNEQIETLRASIETYFIL

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 32176; Mature: 32176

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKKEKIIKTGIHLFAKKGFSSTTIQEIAGECGISKGAFYLHFKSKEDLLLSACEYYIG
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHC
MSMEEIKKIKTEHQHKPPKDVFRKQIAYQFQEFMEHKDFIILLLSEKVIPENQKVKQYFH
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH
EANIQFNMLYRDALLSVYGDAVTPFLADASVMAQGIVSSYIHFLIFNEHTAFRTENVAAF
HCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LIARIDDLITGLIRDNPDPLLPEDIFTQPAADRERLLADIQKIKAQQGLPEDVLVSLEVI
HHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EEECAKEEPRKPIIKGMLSNLAGSGNEQIETLRASIETYFIL
HHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNEKKEKIIKTGIHLFAKKGFSSTTIQEIAGECGISKGAFYLHFKSKEDLLLSACEYYIG
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHC
MSMEEIKKIKTEHQHKPPKDVFRKQIAYQFQEFMEHKDFIILLLSEKVIPENQKVKQYFH
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH
EANIQFNMLYRDALLSVYGDAVTPFLADASVMAQGIVSSYIHFLIFNEHTAFRTENVAAF
HCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LIARIDDLITGLIRDNPDPLLPEDIFTQPAADRERLLADIQKIKAQQGLPEDVLVSLEVI
HHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EEECAKEEPRKPIIKGMLSNLAGSGNEQIETLRASIETYFIL
HHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]