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The map label for this gene is ydhL [H]

Identifier: 154685078

GI number: 154685078

Start: 592598

End: 593758

Strand: Reverse

Name: ydhL [H]

Synonym: RBAM_006160

Alternate gene names: 154685078

Gene position: 593758-592598 (Counterclockwise)

Preceding gene: 154685082

Following gene: 154685074

Centisome position: 15.15

GC content: 49.27

Gene sequence:

>1161_bases
ATGAATTTCAAAGTATTTCTGCTTGCAGCATCTACCATCGCAGTCGGATTGGTTGAATTAATTGTGGGCGGTATTCTTCC
GCAAATCGCTTCCGACTTAGATATATCCATCGTCAGCGCGGGGCAGCTGATCAGCGTGTTTGCGCTCGGTTACGCGGTAT
CCGGCCCGCTGCTTTTGGCAGTGACGGCAAAGGCTGAACGAAAGCGGCTTTATTTAATCGCACTGTTTATTTTCTTCCTA
AGTAATCTGGTGGCTTATTTCAGTCCCAATTTCGCCGTACTTATGGTGTCACGGGTTCTCGCTTCCATGAGCACAGGGCT
GATTGTCGTCCTTTCTTTAACGATTGCTCCTAAAATCGTGGCGCCTGAATACAGAGCGCGGGCGATCGGCATCATTTTCA
TGGGGTTCAGCTCCGCAATTGCTTTAGGCGTGCCTGTCGGTATTATCATCAGCAATGCCTTCGGATGGCGCATTCTGTTC
TTGGGAATCGGCGTATTATCTCTCGTTTCCATGCTGATTATCAGCGTCTTTTTTGAAAAAATACCTGCTGAAAAAATGAT
TCCGTTTCGGGAGCAGATCAAGACGATCGGGACCGCCAAAATTGCCAGCGCACATCTTGTCACCTTGTTTACATTGGCGG
GGCATTACACACTCTATGCCTACTTTGCGCCTTTTTTGGAAAGAACGCTTCATTTGAGTTCCGTTTGGGTCAGTGTATGC
TACTTTTTGTTCGGTCTGTCAGCGGTATGCGGCGGCCCGTTCGGAGGCTGGCTGTATGACCGTTTAGGAGCATTTAAAAG
CATCATGCTTGTGACCGTTTCTTTCGCTCTGATCCTGTTTATTCTTCCGCTGACAACGGTTTCTTTAATCATTTTCCTGC
CTGCGATGGTGATCTGGGGATTGCTCAGCTGGAGCCTTGCGCCGGCGCAGCAAAGCTATTTAATCAAAATTGCGCCTGAG
TCTTCCGATATTCAGCAAAGCTTCAACACGTCCGCTTTGCAGATCGGCATCGCGCTCGGGTCAGCCATCGGCGGCGGCGT
GATCGGACAAACCGGTTCTGTCACAGCAACAGCCTGGTGCGGCGGTTTGATTGTCATTATCGCTGTCGCGTTAGCTGTAT
TCTCTTTAACGAGACCTGCCTGGAAAACAAAATCCGCATAA

Upstream 100 bases:

>100_bases
TACCAGGAACCGTAAAATCCTGATTACAAAAATTGTCCCGTACACTTTTTGTAATCAGGATTTTTTATTTTCTAAAAAAT
AAAAAAAGGAGTATCTGTAC

Downstream 100 bases:

>100_bases
ATGTGAGACCGCATAAAAGCCAAAGGAGTTCCTTCGGCTTTTGCGGCCTTTGTATTTTGCGGCAGCAAGCTCGTCTTCTG
TCACCCCTTTATGATTGGTT

Product: YdhL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MNFKVFLLAASTIAVGLVELIVGGILPQIASDLDISIVSAGQLISVFALGYAVSGPLLLAVTAKAERKRLYLIALFIFFL
SNLVAYFSPNFAVLMVSRVLASMSTGLIVVLSLTIAPKIVAPEYRARAIGIIFMGFSSAIALGVPVGIIISNAFGWRILF
LGIGVLSLVSMLIISVFFEKIPAEKMIPFREQIKTIGTAKIASAHLVTLFTLAGHYTLYAYFAPFLERTLHLSSVWVSVC
YFLFGLSAVCGGPFGGWLYDRLGAFKSIMLVTVSFALILFILPLTTVSLIIFLPAMVIWGLLSWSLAPAQQSYLIKIAPE
SSDIQQSFNTSALQIGIALGSAIGGGVIGQTGSVTATAWCGGLIVIIAVALAVFSLTRPAWKTKSA

Sequences:

>Translated_386_residues
MNFKVFLLAASTIAVGLVELIVGGILPQIASDLDISIVSAGQLISVFALGYAVSGPLLLAVTAKAERKRLYLIALFIFFL
SNLVAYFSPNFAVLMVSRVLASMSTGLIVVLSLTIAPKIVAPEYRARAIGIIFMGFSSAIALGVPVGIIISNAFGWRILF
LGIGVLSLVSMLIISVFFEKIPAEKMIPFREQIKTIGTAKIASAHLVTLFTLAGHYTLYAYFAPFLERTLHLSSVWVSVC
YFLFGLSAVCGGPFGGWLYDRLGAFKSIMLVTVSFALILFILPLTTVSLIIFLPAMVIWGLLSWSLAPAQQSYLIKIAPE
SSDIQQSFNTSALQIGIALGSAIGGGVIGQTGSVTATAWCGGLIVIIAVALAVFSLTRPAWKTKSA
>Mature_386_residues
MNFKVFLLAASTIAVGLVELIVGGILPQIASDLDISIVSAGQLISVFALGYAVSGPLLLAVTAKAERKRLYLIALFIFFL
SNLVAYFSPNFAVLMVSRVLASMSTGLIVVLSLTIAPKIVAPEYRARAIGIIFMGFSSAIALGVPVGIIISNAFGWRILF
LGIGVLSLVSMLIISVFFEKIPAEKMIPFREQIKTIGTAKIASAHLVTLFTLAGHYTLYAYFAPFLERTLHLSSVWVSVC
YFLFGLSAVCGGPFGGWLYDRLGAFKSIMLVTVSFALILFILPLTTVSLIIFLPAMVIWGLLSWSLAPAQQSYLIKIAPE
SSDIQQSFNTSALQIGIALGSAIGGGVIGQTGSVTATAWCGGLIVIIAVALAVFSLTRPAWKTKSA

Specific function: Involved in the efflux of purine ribonucleosides, such as guanosine, adenosine and inosine, as well as purine bases guanine, adenine and hypoxanthine, and purine base analogs 2,6- diaminopurine and 6-mercaptopurine. Therefore plays a role in maintaining t

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. DHA1 family. PbuE (TC 2.A.1.2.25) subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=336, Percent_Identity=29.1666666666667, Blast_Score=142, Evalue=5e-35,
Organism=Escherichia coli, GI1787808, Length=367, Percent_Identity=25.3405994550409, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1786595, Length=367, Percent_Identity=24.2506811989101, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI145693198, Length=360, Percent_Identity=22.5, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41099; Mature: 41099

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKVFLLAASTIAVGLVELIVGGILPQIASDLDISIVSAGQLISVFALGYAVSGPLLLA
CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCEEEE
VTAKAERKRLYLIALFIFFLSNLVAYFSPNFAVLMVSRVLASMSTGLIVVLSLTIAPKIV
EECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHEEEEHHHCCCCC
APEYRARAIGIIFMGFSSAIALGVPVGIIISNAFGWRILFLGIGVLSLVSMLIISVFFEK
CCCHHHHEEEEEEECHHHHHHHHCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IPAEKMIPFREQIKTIGTAKIASAHLVTLFTLAGHYTLYAYFAPFLERTLHLSSVWVSVC
CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFLFGLSAVCGGPFGGWLYDRLGAFKSIMLVTVSFALILFILPLTTVSLIIFLPAMVIWG
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLSWSLAPAQQSYLIKIAPESSDIQQSFNTSALQIGIALGSAIGGGVIGQTGSVTATAWC
HHHHCCCCCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHH
GGLIVIIAVALAVFSLTRPAWKTKSA
HHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNFKVFLLAASTIAVGLVELIVGGILPQIASDLDISIVSAGQLISVFALGYAVSGPLLLA
CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCEEEE
VTAKAERKRLYLIALFIFFLSNLVAYFSPNFAVLMVSRVLASMSTGLIVVLSLTIAPKIV
EECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHEEEEHHHCCCCC
APEYRARAIGIIFMGFSSAIALGVPVGIIISNAFGWRILFLGIGVLSLVSMLIISVFFEK
CCCHHHHEEEEEEECHHHHHHHHCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IPAEKMIPFREQIKTIGTAKIASAHLVTLFTLAGHYTLYAYFAPFLERTLHLSSVWVSVC
CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFLFGLSAVCGGPFGGWLYDRLGAFKSIMLVTVSFALILFILPLTTVSLIIFLPAMVIWG
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLSWSLAPAQQSYLIKIAPESSDIQQSFNTSALQIGIALGSAIGGGVIGQTGSVTATAWC
HHHHCCCCCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHH
GGLIVIIAVALAVFSLTRPAWKTKSA
HHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA