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The map label for this gene is ypzD [H]

Identifier: 154684927

GI number: 154684927

Start: 459731

End: 459943

Strand: Reverse

Name: ypzD [H]

Synonym: RBAM_004580

Alternate gene names: 154684927

Gene position: 459943-459731 (Counterclockwise)

Preceding gene: 154684930

Following gene: 154684926

Centisome position: 11.74

GC content: 38.03

Gene sequence:

>213_bases
ATGATGGATTCCCCTATTAAAATTAATAACTTAACAGGAAATGGAGTTATCAATGTCGGCGGCGCGTTAACCATCACCCC
TATAACCGCTTCAAAAACAGTGTTTGGATCCGGAGGTTTAAATACTGGAATTGTCATCCAAAACAACTCTGTAAGCCAGT
CGAAAATGATTGGCCATCAATTTTCAGATCAGAAGGTTATAAAAACGTTTTAG

Upstream 100 bases:

>100_bases
ATTACTTTTACAGCATGAAACTTTACCGCGTTGTTTAATCCTATTAAAAATAACAGCATACATATAGTTAGTAGTTTAAA
GTGAAAGGAGACAGCAGAAT

Downstream 100 bases:

>100_bases
TGACGGCTATAAAAGATATTACGAAAAAACGCCTTATCTGGCGTCTTCAATTTAAGAGGAAGGGTTGGATTTCACTAGTT
CCGCGATACAATATATATAG

Product: YpzD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MMDSPIKINNLTGNGVINVGGALTITPITASKTVFGSGGLNTGIVIQNNSVSQSKMIGHQFSDQKVIKTF

Sequences:

>Translated_70_residues
MMDSPIKINNLTGNGVINVGGALTITPITASKTVFGSGGLNTGIVIQNNSVSQSKMIGHQFSDQKVIKTF
>Mature_70_residues
MMDSPIKINNLTGNGVINVGGALTITPITASKTVFGSGGLNTGIVIQNNSVSQSKMIGHQFSDQKVIKTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerPA/gerPF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019618 [H]

Pfam domain/function: PF10676 gerPA [H]

EC number: NA

Molecular weight: Translated: 7293; Mature: 7293

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDSPIKINNLTGNGVINVGGALTITPITASKTVFGSGGLNTGIVIQNNSVSQSKMIGHQ
CCCCCEEEEECCCCCEEEECCEEEEEEECCCCEEEECCCCCCCEEEECCCCCCCCCCCCC
FSDQKVIKTF
CCCCEEEECC
>Mature Secondary Structure
MMDSPIKINNLTGNGVINVGGALTITPITASKTVFGSGGLNTGIVIQNNSVSQSKMIGHQ
CCCCCEEEEECCCCCEEEECCEEEEEEECCCCEEEECCCCCCCEEEECCCCCCCCCCCCC
FSDQKVIKTF
CCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]