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The map label for this gene is ycxC [H]

Identifier: 154684841

GI number: 154684841

Start: 370778

End: 371740

Strand: Reverse

Name: ycxC [H]

Synonym: RBAM_003720

Alternate gene names: 154684841

Gene position: 371740-370778 (Counterclockwise)

Preceding gene: 154684843

Following gene: 154684840

Centisome position: 9.49

GC content: 48.18

Gene sequence:

>963_bases
ATGATTAATCAAAACCGTTTGGCTGCTGCTTACCTCGCTGCCATTTTAAATGCGCTGATTATCGGTTTTTCCTTTATATT
TGTCAAGATTGCGCTTCGATCCGCCAATCCGTTTGATATATTGGCTCATCGGTTCACAGCGGCCTTCATCTGTGCAATGC
TTCCTGTTTTATTCGGCTGGATCAAACTGTCCGTCAGCTGGAAGAATGTGCTGGCGATCTTGCCTTTGGCCCTTTTATAT
CCGGCTTTGTTTTTCAGTTTTCAGGCGTTCGGCCTTTTGTATTCTTCATCATCGGAAGCCGGTATCATTCAAGCCGCCAT
CCCGATTTTTACGATGCTGTTTTCGTCTTACTTTTTAAAGGAACGTCCGACATGGGCGCAAAAGGGATTCACATGCCTGT
CAGTGGCCGGGGTGGTATTTATTTTCACAATGAAAGGGGTGTCCGCGGAATCGGCGAGTTTTAAAGGTGCTTTCCTGATC
CTGTTGTCCGCGCTGTCCTCCGCCCTTTACAATACGGCAGCGAGACGCATGACCCTGCGTTTTTCATTGGGTGAGCTGAC
CTGGTGCATGTCTGCGATCGGCTTTGCTTCCTTCAACTGCATCGCTCTCTTCCGGCACGGAGCGGAAGGAACGATCGGGC
AGTATTTTCTGCCCTTCCGCGATCCCGGTTTTATCGCAGCGATTCTGTATTTAGGCATTTTGTCTTCTCTCATTACATCA
TTGATGTCAAACTACGCGCTGTCCAAGATTGAAGCGTTTAAGATGAGCGCCTTTAACAATTTGTCCGTCATCGTGACGAT
GCTTGCGGGTGTCCTCGTTCTCCATGAGTCACTCCGCTGGTATCATATCGCCGGCGCCGTCTGTATCGTCATCGGAGTCT
TGGGAAGCAATGCTTCAGGACGGCGGAAAAAAAGCATATTACGACATAGGGAAAAAATGAAAGGAAACAAAGACGGAATA
TGA

Upstream 100 bases:

>100_bases
CCGGTACAGTTTATCATTATTCTCATTGTACTGCTTCTTCCCTTCCCATACAATAAAAGGGAGCGGCCGGCGCTCGATCT
CATTAAAGGAGTTCGTAAAG

Downstream 100 bases:

>100_bases
TCAACACACGAAATGAAAATATCTATCTCGCGGGCTGCTTAACATTTGCCGATGTAAGAAAACACTTTGCTTATCATCAA
GGAAAATCCGCGGCTGTCTG

Product: YcxC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MINQNRLAAAYLAAILNALIIGFSFIFVKIALRSANPFDILAHRFTAAFICAMLPVLFGWIKLSVSWKNVLAILPLALLY
PALFFSFQAFGLLYSSSSEAGIIQAAIPIFTMLFSSYFLKERPTWAQKGFTCLSVAGVVFIFTMKGVSAESASFKGAFLI
LLSALSSALYNTAARRMTLRFSLGELTWCMSAIGFASFNCIALFRHGAEGTIGQYFLPFRDPGFIAAILYLGILSSLITS
LMSNYALSKIEAFKMSAFNNLSVIVTMLAGVLVLHESLRWYHIAGAVCIVIGVLGSNASGRRKKSILRHREKMKGNKDGI

Sequences:

>Translated_320_residues
MINQNRLAAAYLAAILNALIIGFSFIFVKIALRSANPFDILAHRFTAAFICAMLPVLFGWIKLSVSWKNVLAILPLALLY
PALFFSFQAFGLLYSSSSEAGIIQAAIPIFTMLFSSYFLKERPTWAQKGFTCLSVAGVVFIFTMKGVSAESASFKGAFLI
LLSALSSALYNTAARRMTLRFSLGELTWCMSAIGFASFNCIALFRHGAEGTIGQYFLPFRDPGFIAAILYLGILSSLITS
LMSNYALSKIEAFKMSAFNNLSVIVTMLAGVLVLHESLRWYHIAGAVCIVIGVLGSNASGRRKKSILRHREKMKGNKDGI
>Mature_320_residues
MINQNRLAAAYLAAILNALIIGFSFIFVKIALRSANPFDILAHRFTAAFICAMLPVLFGWIKLSVSWKNVLAILPLALLY
PALFFSFQAFGLLYSSSSEAGIIQAAIPIFTMLFSSYFLKERPTWAQKGFTCLSVAGVVFIFTMKGVSAESASFKGAFLI
LLSALSSALYNTAARRMTLRFSLGELTWCMSAIGFASFNCIALFRHGAEGTIGQYFLPFRDPGFIAAILYLGILSSLITS
LMSNYALSKIEAFKMSAFNNLSVIVTMLAGVLVLHESLRWYHIAGAVCIVIGVLGSNASGRRKKSILRHREKMKGNKDGI

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 35014; Mature: 35014

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINQNRLAAAYLAAILNALIIGFSFIFVKIALRSANPFDILAHRFTAAFICAMLPVLFGW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IKLSVSWKNVLAILPLALLYPALFFSFQAFGLLYSSSSEAGIIQAAIPIFTMLFSSYFLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
ERPTWAQKGFTCLSVAGVVFIFTMKGVSAESASFKGAFLILLSALSSALYNTAARRMTLR
CCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE
FSLGELTWCMSAIGFASFNCIALFRHGAEGTIGQYFLPFRDPGFIAAILYLGILSSLITS
EHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHH
LMSNYALSKIEAFKMSAFNNLSVIVTMLAGVLVLHESLRWYHIAGAVCIVIGVLGSNASG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RRKKSILRHREKMKGNKDGI
HHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MINQNRLAAAYLAAILNALIIGFSFIFVKIALRSANPFDILAHRFTAAFICAMLPVLFGW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IKLSVSWKNVLAILPLALLYPALFFSFQAFGLLYSSSSEAGIIQAAIPIFTMLFSSYFLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
ERPTWAQKGFTCLSVAGVVFIFTMKGVSAESASFKGAFLILLSALSSALYNTAARRMTLR
CCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE
FSLGELTWCMSAIGFASFNCIALFRHGAEGTIGQYFLPFRDPGFIAAILYLGILSSLITS
EHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHH
LMSNYALSKIEAFKMSAFNNLSVIVTMLAGVLVLHESLRWYHIAGAVCIVIGVLGSNASG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RRKKSILRHREKMKGNKDGI
HHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8355609; 8969502; 9384377 [H]