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The map label for this gene is glpQ [H]

Identifier: 154684729

GI number: 154684729

Start: 232111

End: 232998

Strand: Reverse

Name: glpQ [H]

Synonym: RBAM_002600

Alternate gene names: 154684729

Gene position: 232998-232111 (Counterclockwise)

Preceding gene: 154684730

Following gene: 154684726

Centisome position: 5.95

GC content: 45.95

Gene sequence:

>888_bases
ATGCGGAAACATAAATTGTTTGCTTTGGTATTGCTTTCATTCGGTTTATTGTCATTCATCGTCACGCCTGTATCGGCAGC
GGGAAAAGGAAACCTCTTGTCTCCTGACAGAATTTTGACCATTGCCCATCGCGGTGCTTCGGGGTATGTCCCGGAGCACA
CGATCCTTTCTTATGAAACTGCGCAAAAAATGAAGGCTGACTATATTGAGCTGGATTTACAAATGACAAAAGACGGCAAG
CTGATCGTCATGCATGATGAAAAACTGGACCGCACCACAAACGGACAAGGCTGGGTGAAGGATCATACATTAGCCGAGAT
TCAAAAGCTCGACGCCGGCTCTTGGTTCAATAAGGCCTATCCGGAAAAAGCAAAACCGCAATACGCCGGACTTCGCGTTC
CCACACTTGATGACGTGTTAAAACGGTTCGGCAGACATGCAAACTATTATATTGAAACAAAGGCGCCCGAAACATATCCG
GGTATGGAAGAAAAACTGATCGCTTCACTGAAAAAATACAAATTGGCAGGTAAGCATGCGAAACTTGGACAAGTTATCAT
TCAGTCTTTCAGCAGGGACAGCCTTCTGAAAATCAAACAGCTCGATCCGAAACTTCCCGCCGTCCAATTGCTTGAAGCGG
AACAGATGACGTCAATGACTGACGCAGATTTAACGGACATTAAAACATATGCCGTCGGAATCGGACCGGATTACAAAGCG
CTGAACGCTCAAAATGTCCGAAACATTCGCAGCCACGGCCTTCTGCTTCATCCTTACACCGTAAACAGCGAGGCGGACAT
GCGCCGTCTGCTGAATTGGGGCGTAACCGGTGTGTTTACCAACTATGCGGATATATTCCAAAAGGTTAAAAAAGAATACA
AATCATAA

Upstream 100 bases:

>100_bases
TGTAAGAAAACAACATAAAAGATTAATATTTTTGCAGTACAGCATTTACAACGATTTTCTACACTAGAGACAGATATTGA
TTTTTAAGGGGGAAGAAAAC

Downstream 100 bases:

>100_bases
AGCCAGCATGGGTTCGGGGATGATGCCGAACCCATTTTTTTTGCCCAATAATGCAAACGCCATCATGGGTTATGTAGCGG
GCGGAGCATATTATTAAAAG

Product: GlpQ

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MRKHKLFALVLLSFGLLSFIVTPVSAAGKGNLLSPDRILTIAHRGASGYVPEHTILSYETAQKMKADYIELDLQMTKDGK
LIVMHDEKLDRTTNGQGWVKDHTLAEIQKLDAGSWFNKAYPEKAKPQYAGLRVPTLDDVLKRFGRHANYYIETKAPETYP
GMEEKLIASLKKYKLAGKHAKLGQVIIQSFSRDSLLKIKQLDPKLPAVQLLEAEQMTSMTDADLTDIKTYAVGIGPDYKA
LNAQNVRNIRSHGLLLHPYTVNSEADMRRLLNWGVTGVFTNYADIFQKVKKEYKS

Sequences:

>Translated_295_residues
MRKHKLFALVLLSFGLLSFIVTPVSAAGKGNLLSPDRILTIAHRGASGYVPEHTILSYETAQKMKADYIELDLQMTKDGK
LIVMHDEKLDRTTNGQGWVKDHTLAEIQKLDAGSWFNKAYPEKAKPQYAGLRVPTLDDVLKRFGRHANYYIETKAPETYP
GMEEKLIASLKKYKLAGKHAKLGQVIIQSFSRDSLLKIKQLDPKLPAVQLLEAEQMTSMTDADLTDIKTYAVGIGPDYKA
LNAQNVRNIRSHGLLLHPYTVNSEADMRRLLNWGVTGVFTNYADIFQKVKKEYKS
>Mature_295_residues
MRKHKLFALVLLSFGLLSFIVTPVSAAGKGNLLSPDRILTIAHRGASGYVPEHTILSYETAQKMKADYIELDLQMTKDGK
LIVMHDEKLDRTTNGQGWVKDHTLAEIQKLDAGSWFNKAYPEKAKPQYAGLRVPTLDDVLKRFGRHANYYIETKAPETYP
GMEEKLIASLKKYKLAGKHAKLGQVIIQSFSRDSLLKIKQLDPKLPAVQLLEAEQMTSMTDADLTDIKTYAVGIGPDYKA
LNAQNVRNIRSHGLLLHPYTVNSEADMRRLLNWGVTGVFTNYADIFQKVKKEYKS

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=186, Percent_Identity=31.1827956989247, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI1788572, Length=345, Percent_Identity=31.304347826087, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI1789858, Length=248, Percent_Identity=31.0483870967742, Blast_Score=106, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17542344, Length=166, Percent_Identity=30.7228915662651, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 33223; Mature: 33223

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKHKLFALVLLSFGLLSFIVTPVSAAGKGNLLSPDRILTIAHRGASGYVPEHTILSYET
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEHHH
AQKMKADYIELDLQMTKDGKLIVMHDEKLDRTTNGQGWVKDHTLAEIQKLDAGSWFNKAY
HHHHHCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCC
PEKAKPQYAGLRVPTLDDVLKRFGRHANYYIETKAPETYPGMEEKLIASLKKYKLAGKHA
CCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHH
KLGQVIIQSFSRDSLLKIKQLDPKLPAVQLLEAEQMTSMTDADLTDIKTYAVGIGPDYKA
HHHHHHHHHCCCCHHEEHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHEEEEEECCCCCCC
LNAQNVRNIRSHGLLLHPYTVNSEADMRRLLNWGVTGVFTNYADIFQKVKKEYKS
CCHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKHKLFALVLLSFGLLSFIVTPVSAAGKGNLLSPDRILTIAHRGASGYVPEHTILSYET
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEHHH
AQKMKADYIELDLQMTKDGKLIVMHDEKLDRTTNGQGWVKDHTLAEIQKLDAGSWFNKAY
HHHHHCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCC
PEKAKPQYAGLRVPTLDDVLKRFGRHANYYIETKAPETYPGMEEKLIASLKKYKLAGKHA
CCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHH
KLGQVIIQSFSRDSLLKIKQLDPKLPAVQLLEAEQMTSMTDADLTDIKTYAVGIGPDYKA
HHHHHHHHHCCCCHHEEHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHEEEEEECCCCCCC
LNAQNVRNIRSHGLLLHPYTVNSEADMRRLLNWGVTGVFTNYADIFQKVKKEYKS
CCHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8012593; 9384377 [H]