Definition Parvibaculum lavamentivorans DS-1 chromosome, complete genome.
Accession NC_009719
Length 3,914,745

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Identifier: 154252789

GI number:

Start: 2525176

End: 2528313

Strand: Reverse

Name: Not Available

Synonym: Plav_2344

Alternate gene names: NA

Gene position: NA

Preceding gene: 154252790

Following gene: 154252788

Centisome position: NA

GC content: NA

Gene sequence:

>3138_bases
TTGTCTCAGGCGGACGCTGCACGCTTGCGGGGTGGCCGCTTGCGCAATGTGGTGCTGGACGATGTTCTTGCGGATCAGCT
GCTGAAGATAAATAGCTTCACCCATCGCGGCCGGGAGTATCCCTTCGATCTCGAGGATGCACATGAAGCCATTCGGCGGC
TTAAGCCTACGCCTGATAGACAGAAGGGTCTTCGCGGTACCAACCAGGACATTTACGACACGCTTGTTCTTGGGACGACC
ATCACCAAGACAATTCAAGGCGACTCGAAGTCCTACTCTTTCCGGTTCATCGACTGGGATACGCCGTCAAACAATATCTT
TCACGTCACCGCCGAACTTGCCGTCGAGCGAACGGCCAGCACGCAAACGAAGCGGTGCGACATTGTTGGCTATGTGAATG
GCATTCCCTTTCTCGTTGTCGAAAACAAGCGATCGACCGAAAGCCTGAAGAAAGCCAAAAGCCAGTTGATCGGCTATCAG
AACGAAGACAACATCCCGCAACTGTTTCATTTCGCCCAGCTTTTGATGGTGATGAATCGAGCGGAGGCGCGCTATGCGAC
TGTCGGCGCTACCCAGCAGTATTGGCAGACGTGGCGCGACGATGAAGACAGGGACGAAGATATTGCCAAACAAGCAAACC
GCCCCCTGTCGCGGGAAGAGGCGGATGCGATCTTTTCCGGAGATTTTTCCGATGCCCGTGCATTCTTCGAAGCCATGGCG
GCCGAAGGACCTCGTGCGATAACAGCGCAGGACAGGGCGATCCATGCCCTGTGCCGACCGGAGCGGCTGCTCGATCTGGT
GCGCCGGTTCACTGTGTTTGACGGAGGCGTGCGAAAAATTGCCCGTCACCAGCAATTCTTCGGCATCCGGGAGACGGTGG
AGCGCATTCGTCACTATGACATTGGCGGCCGGCGAAAGGGGGGCGTGATATGGCATACCCAGGGATCCGGCAAGTCGTTG
ACGATGGTCATGCTCGGCCGGGCGCTGGCACTCGACAAGGCGATACCGAACCCGCGGATCATCATCGTCACGGACCGCGA
AGATCTGGACAAGCAGATCAAGGACACGTTCAAGTCGTGCGACATGAAGCCGATCCGCGCGACGAGCGGGAGTGATCTCG
TCGAACACATCCACAACAAGACGGCCCTCGTCACGACGATCATCAACAAGTTCGACAGCGCGGCAAAGAATGCCGCGGAA
GTCGATGAGGATAGCAATATCTTCGTGCTGGTTGACGAGAGCCACAGGTCTCAAACCGGCCGCTACGGTGGCCATAGCCA
GTTCGCCACGAAGATGCGCCGCCTGTTGCCCAAGGCTTGCTATATCGGCTTCACCGGCACGCCGTTGCTGAAGAAGGAAA
AGAACACTCTCGCGACCTTTGGCGGTCTGATTCACAAGTATCCGATCGACGAAGCTGTGGCAGACCGTGCGGTTGTGCCT
CTGCTCTATGAAGGGCGGCTTGTCGAGCAGCAGGTGAATGCGGGTGTGATTGATCGCTGGTTCGAAAAGATCAGCGAGGG
CCTCAGCAAGAGTCAAAAGGCCGATCTAAAGCGCAAATTCTCTCGCACCGACGCGCTGTCGAAGACCGGCCAGGCGATCC
GGGCCAAGGCTTTCGACATTTCAGAGCACTACCGTCAGCACTGGCAGGGCACCGGGTTCAAGGCGCAGCTCGTTGCTCCC
TCAAAGGCGGCCGCCGTTCGCTTCAAGGAAGTGCTGGACGAAATCGGCCATGTGACGAGCGAAATCATTATCTCGGCGCC
TGATGAAAACGAAGGCAACGAGGAGGTGGATCGCGAGTCGAAGGATATCGTTCGTGCGTTCTGGACACGCATGATGGCGC
GCTACAGGAACGAGGACGAGTATAACAGGCAGATTACCGAAGCCTTCAAAGGATCCGGGGATCCGGAAATCCTGATAGTT
GTGTCGAAGCTCCTCACCGGCTTCGATGCACCTCGCAACACAGTACTCTATGTCTGCAAGACGCTTCGCGAGCATAACCT
CCTGCAGGCTATAGCGCGTGTTAACCGGCTCTATGAAGAGGATGGGACTGAGAAGGAATTCGGATTCATCATCGACTATG
AGGGCCTGCTAGGCGAACTCGATGCTGCGCTGACGACCTATAGCGCCTTCGAGGGATATGAAGACGCCGATCTCATTGGT
GCCGTTCATGACGTCCGCGAACAGATCCGCAAGCTTCCGCACGTGCATGACCGGCTCTGGGACTTGTTCAAGTCGGTGAG
AAACAAGAAGGATATGGAGCAATTCGAGCAGTTCCTCGGTGACGAAGCTATCAGGAACGAGTTTTACGAAAGGTTGCGTG
CCTTCAGCCGGTGTCTTCACATGTCGCTGTCATCGGACAAGCTTTTCGACGTCTTCGACGAAGCCAGGGTCGAGACCATG
AAGCGGGACTGGAGGCAGTTCACGGAATTGCGGCGGTCGGTCCAGCTGCGCTATCAGGAGACAGTCGACGTCACCGAATT
CGAGCCGAAGATACAGAAGCTCCTCGACGATCATGTCGTCGCCATGCCGGCAGAGACCATCATCGAAATGGTCAATATCA
ACGATCCCGACGCACTAAAGGCTGTTGTCGACGATAAGGGTGTATCCGAGGCGTCGAGGGCTGATCGGATTGCGAGCGCC
ACTCGCCGGGTTATCACCGAAAAGATGGAGGAAGACCCGACCTTCTACATGCGGTTCTCGGAACTCCTGGAAGAAACCAT
TCGGGACTATCGGGCGAGGCGAATATCGGAGCGCGAGTATCTCGCTAGTGTGGTCGATCTTTCAAGCAAGATTGCCCGCA
AATATCGCGGACGCACGGTTCCGGAGGTGATCAAGGGCAACGACGATGGGCAGGCGTTCTTCGGTGTCCTTGAGGGAACC
ATGATATTCGCCGATGGCCGTGCGATGGAGGAAGATGAAGTGGCCGGCATCGCCCTTGCAATCATCGATATCATCAAGGA
GCACCACATCGTCGATGTCTGGTCCAATGACCTGGCCCAGAACAAGATACGCAATGCGATCGACGATTATTTCTTCGATG
TTGTCCGCGATGAGAAGGGGATCAACCTTTCCGTCGGAACTCTCGATGACCTCGAAAGTCGTATTATGAACCTCGCAAAG
GCGCGGTTTCCTGGATGA

Upstream 100 bases:

>100_bases
GACTGTTTTCGGAAGGCCTGCAATGACCTTCAACGCTGCCGAGAAGTATCAGTCCCAGATTCCGGCTCTTCAAATGCTGG
TAGCACTGGGATTCAGGCCA

Downstream 100 bases:

>100_bases
AGGCAGAGCGGCATGAAATTCGGTATGGCGATCATGTGATCGGTTTTTCGGTCACCCGGCGGAGCCGTAGAACGCTGGAA
ATTGCCGTCGAGCCAGATTC

Product: HsdR family type I site-specific deoxyribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1045_residues
MSQADAARLRGGRLRNVVLDDVLADQLLKINSFTHRGREYPFDLEDAHEAIRRLKPTPDRQKGLRGTNQDIYDTLVLGTT
ITKTIQGDSKSYSFRFIDWDTPSNNIFHVTAELAVERTASTQTKRCDIVGYVNGIPFLVVENKRSTESLKKAKSQLIGYQ
NEDNIPQLFHFAQLLMVMNRAEARYATVGATQQYWQTWRDDEDRDEDIAKQANRPLSREEADAIFSGDFSDARAFFEAMA
AEGPRAITAQDRAIHALCRPERLLDLVRRFTVFDGGVRKIARHQQFFGIRETVERIRHYDIGGRRKGGVIWHTQGSGKSL
TMVMLGRALALDKAIPNPRIIIVTDREDLDKQIKDTFKSCDMKPIRATSGSDLVEHIHNKTALVTTIINKFDSAAKNAAE
VDEDSNIFVLVDESHRSQTGRYGGHSQFATKMRRLLPKACYIGFTGTPLLKKEKNTLATFGGLIHKYPIDEAVADRAVVP
LLYEGRLVEQQVNAGVIDRWFEKISEGLSKSQKADLKRKFSRTDALSKTGQAIRAKAFDISEHYRQHWQGTGFKAQLVAP
SKAAAVRFKEVLDEIGHVTSEIIISAPDENEGNEEVDRESKDIVRAFWTRMMARYRNEDEYNRQITEAFKGSGDPEILIV
VSKLLTGFDAPRNTVLYVCKTLREHNLLQAIARVNRLYEEDGTEKEFGFIIDYEGLLGELDAALTTYSAFEGYEDADLIG
AVHDVREQIRKLPHVHDRLWDLFKSVRNKKDMEQFEQFLGDEAIRNEFYERLRAFSRCLHMSLSSDKLFDVFDEARVETM
KRDWRQFTELRRSVQLRYQETVDVTEFEPKIQKLLDDHVVAMPAETIIEMVNINDPDALKAVVDDKGVSEASRADRIASA
TRRVITEKMEEDPTFYMRFSELLEETIRDYRARRISEREYLASVVDLSSKIARKYRGRTVPEVIKGNDDGQAFFGVLEGT
MIFADGRAMEEDEVAGIALAIIDIIKEHHIVDVWSNDLAQNKIRNAIDDYFFDVVRDEKGINLSVGTLDDLESRIMNLAK
ARFPG

Sequences:
NA

Specific function: NA

COG id: COG0610

COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA