Definition Parvibaculum lavamentivorans DS-1 chromosome, complete genome.
Accession NC_009719
Length 3,914,745

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Identifier: 154252772

GI number:

Start: 2498450

End: 2503798

Strand: Reverse

Name: Not Available

Synonym: Plav_2325

Alternate gene names: NA

Gene position: NA

Preceding gene: 154252774

Following gene: 154252771

Centisome position: NA

GC content: NA

Gene sequence:

>5349_bases
ATGGGCGTGGCAAGCGGAAATCGGGTAGCGACAGGGCGGCGCACCATGCGTGTAACCACTTGGCGCTTCATGCGTCTGCG
GCGCAAGGCTGTGCCACCCGTCATCCTCCGACGCAATCTGACGCGGCGTCTCCTCTCCAGCGTCGGCGTTGCCGCCCTTC
TCGCGGGTGTTAGCCTCGCGCTTCTTCCAGCCCCCACCCGCGCGGATACCTCATGGACGGGCGCTGCCGACAGCGACTGG
AACAACGCAGCCAACTGGTCAAACGGTCTGCCGGTCAACACTTCGGGAACGACGAAGATCGAAGGGCCGGTCGCCGCGAC
TGTCGATGGTGTCAGTGTGGCGGACTCTGGCCGCACCAATATCGGCTCCGCCGCGCAGGACGGTTCGCTCATCGTGCAGG
GCGGCGGTACGCTGAATGCGGGTGTATTTGAGCTCTTCGGATATAATGGCTTCAGCGGTACCGCAACCATCCGTGGCGCC
GGGTCCGGGATATCCACTTCGTCGAGCCTCTTTGTCGGCGCCTACACGGGCGTCGGCCATATCTTCATCGAGGACGGCGG
AACGCTGACCACCCCCTATTCTACATATATGAGCCAGTATAACGGCTCGCTCGGTACCGTAACGGTGACTGGTTCAGGTT
CGACCTGGAACAGTAACTATGAGATCAATCTCGGCGGTGCCGAAGGCAATTACGACGCGACGGGTATCCTGACGATCGCG
GATGACGGCCTGGTCAACATAAACAATGGCAACAGGAATCTGAATGTCGCCAAATCGACCGGCTCCACCGGCACGCTGAA
TATCGGCGCGGCGGAAGGCGATGCCGCCGTCGCGGCGGGATCGTTGCAGGCAAAGAGTGTTGTGTTCGGGGCGGGCGACG
GTACGCTCGTCTTCAATCATACGGAAACGGATTACACCTTCGCTCCGTCCATCTCGGGCAATGGCGGCGTACATCAGCTC
GCGGGCACCACCAACCTCTCCGGATCGAATAGCTGGTCGGGAAGCACTCTGGTCGAAGGCGGTATTCTGCGCGCGGGCGC
GGCGGGCGCTCTTTCCGCCAACGCCGCCTACACGGTCAATGGCGGTACGCTCGATCTCAACGATTTCGACCTCACCGCAA
CCGAACTCTCGGGCACGGGCGGAACGGTCGATCTCGGGACCGCCGAACTCGAAGTCGACCAGGACGGCGACTCCGTTTTC
GATGGCCTCATCGCGGGTGCGGGCAGTCTGGTGAAGCTCGGTTCCGGCATCCTCTCGCTGACCGGCGCGAACACCTATTC
CGGCGGCACAACGCTCGGCGAGGGTACGCTCCGCCTCGAAGACGACGATGCCATTGGCACCGGCGCACTCACCGTCACCG
GCGGCACCCTCGACTATGATGACGGCATCGACCTGTCGAACGACATCGACTTGCGGGCGCAGGCGACCCTCAACGTCACC
ACCGGCTCCGCCACCCAGTCCGGCAATATCGGCGAGACGGGCGGCAGCTTCGGTATCGTGAAGTCCGGCGCGGGCATCCT
CTCGCTCACCGGCGCGAACACCTACACAGGCACCACCACTGTTTCCGGCGGCACGCTGCGTGCCGGCAGTGCCGACGCTC
TCGTCTCCGGCGCCTACATCTTGAACGGCGGTACCCTCGACCTCAATGACTTCGATCTTTCCGCCTCCGGACTTTCCGGT
GCAAGCGGTACCGTCGATCTCGGCAGCGCCGAACTCGAAGTCGATCAGGACAGCGACGGGGTCTTCGGCGGCATCATCTC
GGGCGCGGGAAGCCTCCTGAAGCTCGGCTCCGGTATGCTCACCCTCACGGGCGGGAGCACCTATACGGGCCTCACCACCA
TACGTGAGGGGACGCTTGCTCTCGACGGCGGCTCTGTGGAGTCGTCCGACGACGTCATCATCGGAGATCTGGCCCATACG
GTGGGTGAAGTCACGGTGACTGGTGCGGGAGCCTCGCTCGACACCGACAGCAGTGTGCTTGTCGGAGAGCTCGGTGAGGG
AACACTGAACGTCGAAAATGGCGGCGTTGTGACGGCCGATGTTGTCATTGCCGGGCATCTTTCGGGTTCGGACGGAGCGA
TCCGTGTCACCGGAACCGGATCGCAGGTCAACAGCACCAGCTTGCTTCGGATTGGCGATGAGGGCGTCGGGCGCCTGATC
GTGTCTGAAGGTGGCGCCGTGACGAATACAAGCACAGGCTATATCGGCGCAGGCACGAATGGTGAGGGCGCCATGACTGT
CACCGGCACAGGATCGAAACTCGACAATTCCGGCATCCTCTATGTTGGCGGCGAGTACAATGGCGCGATTGGTGTCCTGA
CCGTTGCCGGCGAAGCCGCTGTCAATGTAGGGGCCGGCAGCGGCACAGTCCGTGTCGCGCATCATTCCGGCGCCACCGGC
ACCCTCAATATCGGTGCGGCGGAAGGCGATGCCGCCGTCGCGGCCGGCACACTGAATGCCGCCAGCCTGCAATTTGGTGC
GGGTACCGGTCAGATTGTCTTCAATCATCTCGACGATGACCATGCCTTCTCCAGCGATGTTTCCGGCGCCGGCGAAGTGC
TTCATCTTTCCGGCACCACCATCCTGACCGGCGAGAACACCTATACCGGCGGCACCACCGTTTCGGGCGGCACGCTCCGC
GCGGGCCGCGTCGGCGCATTCACCTCCGGCGGCTACGAAGTGAATGGTGGCACGCTCGACCTCAACGATTTCGACCTTTC
CATGTCCGAGCTCTCCGGCATCGGCGGTGCCGTCGATCTCGGCAGCGCGGCGCTCGCGGTCGGCAGCGGCAACACGGACG
CGAATTTTGCGGGCGTGATCTCAGGTATCGGCAGCCTCGAAAAGACGGGCCTGGGTTCCTTCACCCTCGCCGGCGCGAAC
AGCTACACTGGCGGCACGACGGTTTCGGGCGGCACGCTGCGCGCGGGCGCCGCGTCGGCCTTCGTCGACGGCAGCGCCTA
TACGGTCGATGGCGGCACGCTCGACCTCAACGATTTCGATCTTTCCATGTCCGAGTTGTCGGGCACCGGCGGCACGATCG
ATCTCGGCGGCGCGACGCTTACCGTCGGCAGCGGCAACACGTTCACGAACTTCGCGGGCGCGATCGAAGGAACGGGCGGT
CTCGAAAAGACGGGAACGGGAGAACTGACGCTGACCGGCGCGAACAGCTACACCGGCGGCACGACGATTTCCGGTGGTAC
GCTCGAAGGCAGCACGTCGAGCCTCGTCGGCGATATCGTGAACAATGCCACGCTCGCCTTCACGCAGGCATTCGACGGCA
CGTTCGGCGGCGTCATATCTGGCACGGGCAGTCTCGTGAAGTCCGGTTCCGGCGTTCTGACCCTGACCGGCGCGAATAGC
TGGTCAGGCGGTACGACGATCCGGCACGGCACGCTCGAAGGCAGCACGTCGAGCCTCACCGGCGACATCGTCAACGACGC
GGCGCTTGTCTTCGCGCAGGCGGGCGACGGCACCTATGCGGGCGCGGTCTCGGGCACCGGCAGCCTCGAGAAGACCGGCG
CGGGCACGCTCACGCTCACCGGCGCGAACGGCTACACCGGCGGCACCACGGTTTCCGGCGGTACGCTCGCGGGCAACACG
TCGAGCCTTCAGGGTGACATCGTCAACAATGCGAGCCTCCTCTTCGACCAGTCGGCGGACGGCACCTATGCGGGCGTCCT
GTCCGGCAACGGCGACATCGTGAAGTCCGGCGCGGGGAGCCTCGTCCTCTCCGGCATCAGCGGCGCCTTCACGGGCGGCC
TGGAGGTGCTGTCGGGCAGCCTCGTCGTCGACGGCACCTTCGGGGGCGGCCTTCTCGTCTCGGGCGGCTTCCTCGGCGGT
TCGGGCACGGTCGGCAGCACCACGCTCGGCGGCGGCGCGACGCTCGCGGCGGGCAATTCGATCGGCACGCTCACCGTCGC
GGGCGATCTCGCCTTCTCTGCCGGTTCTGTCCTCGCGGTCGAGGTGAATGACGGCGGCGACGCCGCGGGCGTCAATGCCG
ATTTCGTCCATGTGACGGGCGCGGCGACGATCGCGAGCGGCGCGGTCGTCGAGGTCGCGCCGGCGAACGGCACGGATGAC
GGCATCACCTATGCGCCCTCCACCACCTACCGGATCCTCACCGCCGATGGCGGCATCAGCGGCGTCTTCGACGGCGTCAC
GGCGGGCTTCGCCTTCCTCATGCCGGAAGTCTCCTACGACGCCACCAACGTCTTCCTCATCCTCACGCAGATGGCGGCCT
TCGAGGATGTGGCGTCGACGCCGAACCAGCAGGGCGTCGCGGCCGCGGCCGAGGCGCTCGGCGCCGGTAACCCCCTCTAT
GACGAGATCATCGGCATGTCGGAGGAAGAGGCGCAAGCGGCCTTCGACGCGCTCTCGGGCGAGGCGCATGCAAGCTCGAC
CGGCGTCTTTTCCAGCTCCGCCGGGATCGTCCGGCGGACGATCTTCTCCCGTCTCTTCTCGCGCTTCGGCGCGCCGCGCG
GCTTCGCGGCGGCGGAAGGCTATGTGCCGGCGGCGGGCGACGAGACGCCGCATGGCTATACGGTATGGGGAGAACTCGTC
CGCGGCTGGGGCGAGACGGACGGGTCGGTGTCGGCGGCGGGCATCGAGCGCAATTCGACCGGCTTCCTCGGCGGCGTTGA
TCGCGAGATCGGCGAGGCAAGCCGCATCGGTATCGCGCTCGGCTACAGCCATGCCACCTTTGACGTCTCGGGGCGCGCCT
CCTCGGGCGAAAGCGACAACTTCCATGTCGCGGGCTATGCGGGAACCGAACTCGGTCCCATGGACCTGAAGGGCGTCCTC
GGTTACAGCTACCAGATGGCCGAAAGCCGCCGCCGTGTCGTCGTCGGCGGCGTCATCGACGATCTCTCGGCGGACTACGG
CGCCCACACCTTCCAGGCATCGGGTGAGGCTTCCGTCGATCTCGCAGCGGGTCCCGTCACCCTGACGCCTTTCGCGGGCC
TCGCCGTCGTTCATGTCGAGACGGAAGCCTTCACCGAGACGGGCGGGCCGTCGGCGCTTTCCATCGCCTCCTCCAGCAAC
ACCACCGGCATCTCTGAGCTCGGTCTGCGCGCCGCGCGCGAGGCGGGCTCCCTCACCCTTTTCGGCTCAGCCTCCTGGCG
TCACGTTTTCGGCGATGTCGAGCCCCTTTCCCGCGCCTCTTTCGCAAGCTCGCCCGCTACCACCTTTTCGGTTCGCGGCA
CACCCCTCTCCGAGGACGTCGCCTCCATCGGCGGCGGGGTCGAACTTCTCATCGCCGAGGAAACGACGCTCGAGTTTTCC
TATCGCGGTGAATTCGCCTCCGACAGCCGCGACCATGGGCTGAAGGCGAAAGTTTCCATCCGCTTTTGA

Upstream 100 bases:

>100_bases
GTGGTTAATGGCACCTGTACACCTGTACATCTGTCGTCCAGCCCGCCCGCCGCTGATTATGCCCGTGATTTTCTTCAATG
ACGGGCTGTGGGGACCGATC

Downstream 100 bases:

>100_bases
AAAGCAAAAATCAGCAACCGCGCGTTCGAGGAAATCATTGTCTCACAATAACGGGGCCCCTGCAGGTGCCAGCCGTTCGG
GTAACTGGTGGTTTTGGGTA

Product: outer membrane autotransporter

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1782_residues
MGVASGNRVATGRRTMRVTTWRFMRLRRKAVPPVILRRNLTRRLLSSVGVAALLAGVSLALLPAPTRADTSWTGAADSDW
NNAANWSNGLPVNTSGTTKIEGPVAATVDGVSVADSGRTNIGSAAQDGSLIVQGGGTLNAGVFELFGYNGFSGTATIRGA
GSGISTSSSLFVGAYTGVGHIFIEDGGTLTTPYSTYMSQYNGSLGTVTVTGSGSTWNSNYEINLGGAEGNYDATGILTIA
DDGLVNINNGNRNLNVAKSTGSTGTLNIGAAEGDAAVAAGSLQAKSVVFGAGDGTLVFNHTETDYTFAPSISGNGGVHQL
AGTTNLSGSNSWSGSTLVEGGILRAGAAGALSANAAYTVNGGTLDLNDFDLTATELSGTGGTVDLGTAELEVDQDGDSVF
DGLIAGAGSLVKLGSGILSLTGANTYSGGTTLGEGTLRLEDDDAIGTGALTVTGGTLDYDDGIDLSNDIDLRAQATLNVT
TGSATQSGNIGETGGSFGIVKSGAGILSLTGANTYTGTTTVSGGTLRAGSADALVSGAYILNGGTLDLNDFDLSASGLSG
ASGTVDLGSAELEVDQDSDGVFGGIISGAGSLLKLGSGMLTLTGGSTYTGLTTIREGTLALDGGSVESSDDVIIGDLAHT
VGEVTVTGAGASLDTDSSVLVGELGEGTLNVENGGVVTADVVIAGHLSGSDGAIRVTGTGSQVNSTSLLRIGDEGVGRLI
VSEGGAVTNTSTGYIGAGTNGEGAMTVTGTGSKLDNSGILYVGGEYNGAIGVLTVAGEAAVNVGAGSGTVRVAHHSGATG
TLNIGAAEGDAAVAAGTLNAASLQFGAGTGQIVFNHLDDDHAFSSDVSGAGEVLHLSGTTILTGENTYTGGTTVSGGTLR
AGRVGAFTSGGYEVNGGTLDLNDFDLSMSELSGIGGAVDLGSAALAVGSGNTDANFAGVISGIGSLEKTGLGSFTLAGAN
SYTGGTTVSGGTLRAGAASAFVDGSAYTVDGGTLDLNDFDLSMSELSGTGGTIDLGGATLTVGSGNTFTNFAGAIEGTGG
LEKTGTGELTLTGANSYTGGTTISGGTLEGSTSSLVGDIVNNATLAFTQAFDGTFGGVISGTGSLVKSGSGVLTLTGANS
WSGGTTIRHGTLEGSTSSLTGDIVNDAALVFAQAGDGTYAGAVSGTGSLEKTGAGTLTLTGANGYTGGTTVSGGTLAGNT
SSLQGDIVNNASLLFDQSADGTYAGVLSGNGDIVKSGAGSLVLSGISGAFTGGLEVLSGSLVVDGTFGGGLLVSGGFLGG
SGTVGSTTLGGGATLAAGNSIGTLTVAGDLAFSAGSVLAVEVNDGGDAAGVNADFVHVTGAATIASGAVVEVAPANGTDD
GITYAPSTTYRILTADGGISGVFDGVTAGFAFLMPEVSYDATNVFLILTQMAAFEDVASTPNQQGVAAAAEALGAGNPLY
DEIIGMSEEEAQAAFDALSGEAHASSTGVFSSSAGIVRRTIFSRLFSRFGAPRGFAAAEGYVPAAGDETPHGYTVWGELV
RGWGETDGSVSAAGIERNSTGFLGGVDREIGEASRIGIALGYSHATFDVSGRASSGESDNFHVAGYAGTELGPMDLKGVL
GYSYQMAESRRRVVVGGVIDDLSADYGAHTFQASGEASVDLAAGPVTLTPFAGLAVVHVETEAFTETGGPSALSIASSSN
TTGISELGLRAAREAGSLTLFGSASWRHVFGDVEPLSRASFASSPATTFSVRGTPLSEDVASIGGGVELLIAEETTLEFS
YRGEFASDSRDHGLKAKVSIRF

Sequences:
NA

Specific function: NA

COG id: COG4625

COG function: function code S; Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA