Definition Parvibaculum lavamentivorans DS-1 chromosome, complete genome.
Accession NC_009719
Length 3,914,745

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Identifier: 154252331

GI number:

Start: 2041728

End: 2043836

Strand: Reverse

Name: Not Available

Synonym: Plav_1883

Alternate gene names: NA

Gene position: NA

Preceding gene: 154252334

Following gene: 154252330

Centisome position: NA

GC content: NA

Gene sequence:

>2109_bases
GTGATCGATTTTCGGTTCGCGGCCGGGTTGCTGGCCATTCCTCTGCTGGCATCCGCCGGTCCTGCCGCCGCCCAGCAGCC
CGAGACGCCGGAAACCGTCACAACCGGGGAAGCCGGGGAACAGCCTCCTCGCGTCTGGGGCCTCGACCAGATTACGGTCA
CGACCACCGGCCTCGGCACGCCGCGTGCGACCCATACGGGCAACATCGCCAAAATTTCCGGCGACGATGTCGATTTCATC
GCCCCTGTTCAGCCCGCCGAGGCGCTGAACCGCCTGCCCGGTGTCGGTATCCAGCAAGGCAGCGGTGCCGAACATCTGAC
AGCCATCCGCTCGCCCGTCCTTTCGGGCGGCGCGGGCGCGGGCTCCTTCCTCTACCTGGAAGACGGCGTGCCGATGCGCG
CGGCGGGCTTCGCCAATGTGAACGCGCTGATGGAGGCGATGGACGAAGTCTCGGGCGGCATCGAGGTGGTGCGCGGCCCC
GGCGGCGCGCGTTACGGCTCGAACGCCGAACACGGCCTCATCAATTTCCTGAGCCGCCCGCCCGCGCCCGACAGCGACGC
CGAACTTTCCGCCTGGGCGGGCCCGCACGATCTCTTCAAGATCGCCGGCACCGCGAGCAAGACCCTGCGCGGCGAAGGTC
TCGCCACGCATGGCTTTCGCGGCAGCTTCTCCACCCTCCATGATGGCGGCTTCCGCGCCTCCTCCGGCCTCGATCAGCAG
AAGGCGCGGCTGCGTTATGATTTCGAAACACCTGAAACACGCATGCAGGCAACGCTCACGGCGGTGAACGTCAATCAGGA
AACGGCGGGCTTCGTCGTCGGCCCGGATGCCTACAAGAACCCCGCGCTCTACAAGACCAATCCCGACCCTGATGCCTATC
GAGATGCATGGGCCGTCCGCGCGGCAGTTCGTATCGAACGCGACCTCGCCGACGATCTCATGCTCGTGCTGACGCCCTAT
GCGCGAAAAAACGACATGAATTTCCTGATGCACTTCATGCCGGGAACGCCCGTCGAGGAAAACGCACACTGGAGCGGCGG
CCTGCTCTCAAGTCTCGTCAAGGATCTCGACGATGGGCACCGTCTCATATTCGGCTTCGACAGCGAATATACAGACGGGA
CGCTTACCGAATTCCAGGAAGGCCCAACAGTGGGCATCTCGCCTCAAGGGCTCCATTACGACTACACCGTGAAGGCGCTC
GTGCTGGCACCCTATCTCCATAGCGAATGGCGCCTCTCTCCGGCCACATTGTTCACCGCAGGCGTCCGTTTCGAATATAC
GCGCTACGACTACACCAACCACGCGCCGAACGGCACCTTCGGCCGCTTTCTTCGCATTCCGAGCCGCGTCGACGAATTTG
CGGATGTCACACCGAAATTCGGCGTGCTGCACAAATTCAATGACGCCATCACGGGCTATGTGAACATTGCGCGCGGCTCC
CGCGCGCCCCAGACGACAGACCTCTATCGCCTGCAGCAATTCCAGGTGCCGGGCGAGGCGAAGTCGGAAGAACTCGACAG
CATCGAAATCGGTGCACGTGGCGAGTGGATGGGCGTGAGCTACGAGACCAATCTCTTCTACATGGAAAAGAGCAATTTCT
ATTTCCGCGATGCCAATGGCTTCAACGTCTCCGACGGCAAGACGGATCATGCGGGCATAGAGGCGGAGATCGCCGCCCCC
CTCGGCGCGGGCTTCGACATCGCCGCCGCCGCCACCTATGCGCGTCACACCTATGCCTTCGACAATTTCATTTCTCCGAC
CTCCACCGAAACCATCCGCGACGGTGACGATGTCGATACCGCCCCGCGCACCCTCGCCAATGTCCGCCTCGGCTACGTCT
TCAACGAAGGCGCGGGCCGGGCTGAAATCGAATGGGTCCACATGGGCGCCTACTGGATGGATGCCGCCAACACCGCAAAA
TATGACGGTCACGACATCTTCAACATCCGCCTCGATTACACGCTCACCGAGCACCTCGCGCTGTTCGGCAAGGTCACCAA
CGTCTTCGACACCCGCTATGCCGATCGTGCCGATTTCGCCTTCGGCAACGAGCGTTATTTCCCCGGCGAGGACCGTGGCC
TGATCCTCGGCGCGTCCTTGCGTTTCTGA

Upstream 100 bases:

>100_bases
CGACCTCGCCGCCCGCCATGATAACAATGCATATTAAGTGGCCGGTGAGTGCCGCAGAGGTGGAGAGAGACAAGGGGTCC
CGCCCCGGGGGAGCATTGTA

Downstream 100 bases:

>100_bases
CCGGGCGATTGGGCGGGACGCGCCTCGCCGCCTGCACTATTCTGGAGCCCGATGGAAACCGGATTTTGGGATATCTGGCC
GTTCCTTCTCGCCGTCATTC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>702_residues
MIDFRFAAGLLAIPLLASAGPAAAQQPETPETVTTGEAGEQPPRVWGLDQITVTTTGLGTPRATHTGNIAKISGDDVDFI
APVQPAEALNRLPGVGIQQGSGAEHLTAIRSPVLSGGAGAGSFLYLEDGVPMRAAGFANVNALMEAMDEVSGGIEVVRGP
GGARYGSNAEHGLINFLSRPPAPDSDAELSAWAGPHDLFKIAGTASKTLRGEGLATHGFRGSFSTLHDGGFRASSGLDQQ
KARLRYDFETPETRMQATLTAVNVNQETAGFVVGPDAYKNPALYKTNPDPDAYRDAWAVRAAVRIERDLADDLMLVLTPY
ARKNDMNFLMHFMPGTPVEENAHWSGGLLSSLVKDLDDGHRLIFGFDSEYTDGTLTEFQEGPTVGISPQGLHYDYTVKAL
VLAPYLHSEWRLSPATLFTAGVRFEYTRYDYTNHAPNGTFGRFLRIPSRVDEFADVTPKFGVLHKFNDAITGYVNIARGS
RAPQTTDLYRLQQFQVPGEAKSEELDSIEIGARGEWMGVSYETNLFYMEKSNFYFRDANGFNVSDGKTDHAGIEAEIAAP
LGAGFDIAAAATYARHTYAFDNFISPTSTETIRDGDDVDTAPRTLANVRLGYVFNEGAGRAEIEWVHMGAYWMDAANTAK
YDGHDIFNIRLDYTLTEHLALFGKVTNVFDTRYADRADFAFGNERYFPGEDRGLILGASLRF

Sequences:
NA

Specific function: NA

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA