Definition Parvibaculum lavamentivorans DS-1 chromosome, complete genome.
Accession NC_009719
Length 3,914,745

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Identifier: 154251633

GI number:

Start: 1314822

End: 1316684

Strand: Reverse

Name: Not Available

Synonym: Plav_1179

Alternate gene names: NA

Gene position: NA

Preceding gene: 154251634

Following gene: 154251632

Centisome position: NA

GC content: NA

Gene sequence:

>1863_bases
ATGACCAGAGACGACCTCGTCGCCGCGCTCCAATCCATCGAATGGAACGACATCGAATTCAAGGAAGCAGCCTGGGCTGT
GCCCAAGGACGCGCTTTCGACTGTCAGCGCCTTCGCCAACACGGAAGGCGGGCACCTGGTGTTCGGCGTCAAGCAGGCCA
ACGGCACATTTACCGTCACCGGCGTGACCGATGCTGATAAAATACAAAACGACTTTCTGGGCCAAGTTCGAGATTCAAAC
AAAGTCAGCGTATTTTTGCCCATAGGCGGCACGGTTCACGACTTGGCCGAAGGCACAGTTCTGGCCTTTTATATCCCCGA
AGCCGAGCGGCATCAGAAACCGGTCTATCTCGACGGCAATCCGAAAAAAGCTCACATTCGTCGTGGTGGGCGCGATGACA
CCTGCACAGGCGATGAGTTGCTGCGCTTCATTCGTGATGCGTCGAATATCCGCTACGACGCCGAAACGCTCGATGTGGAT
ATTGGCCGGTGTTTCGACGAAGCCTCTGTGCGTTGGTATCGTGCGCGCTTTGCCGCCAGCAACCCCGGCAAAGACACCGC
TGCTGACGACATCACATTCCTGCGGAACTGGGGCTTTCTGGTCGAGCAAGGCGGCGTGCTGCGCCCTAGCCGCGCCGCCA
TTCTGGTGCTGGGCAGCGGTGAATATGTCCGGCAGGTACTGCCGCGCATGGTCACGGACGTACAACTCTACCGCAATGCC
AGCACTGAATATGATTCCACCGTCCGCTGGGCCGACCGCCTCTCGGTGGAGGACAACCTTATCAAGGCTTGGCAGGCCAT
TGTGGAGTTCTACTACCGCCACAGCGAGCGCCCCTTTGCCGTCGACGCGACCACCATGCGGCGTGACGACGACCCGCCCG
ACTACATCTCCTTCCGCGAAGCCGCGATCAATCTGCTGATCCATCAGGATTTCGGCGACACCACCCGTGTGCCGGTCATC
CGCTTCTTCCGTGACCAGACCGAGTTCTTCAATCCTGGCGACGCCTTTGCCTCACGCGAGCAACTGCTCGATCCGGGCGA
TAAGGAGGTTCGCAACCCCAGCATCGTCAGCGCCTTCCGCCGCATCGGGCTGTCCGATCAGGGCGGCACCGGCGTGCGCG
CCATCTTCGACGGCTGGCGCAAACTGGGCTACCTGCCGCCTGAGATCGAGAACCGCAGGGCCGAAAAAAGCTTCCGCCTG
CGCTTGTGCAAGGTAAAGCTCATTACTGAAGCTCAGCTTCTTGCGCAGGCAAGCCTTGGCGCACACCTGTCCGAGCACGA
GGCGGCGGTGTTTGCCTTCCTGCTGCGCAGCGGCCAGGTCGATGTAGCGGACATCAAGGCGCTGACTGGTCTTACTGGCG
CGCAGGCGCTGGATCTGGCGCAGCGCCTGACTGTGCAAGTGCTGACGGAACCGCTCGGCGAGGCGGCCCACACATGGCGG
CTGGTCCCTCACTTGCGCACCCGCTTCGCCGCCGAAACGGCTGAAGATACCACGGATCAACCGACTGGCGCGGAAACGGT
GGTGGCAGGCGCTACCGATCAAGTCACCGAACAAGTTGCACAGGAACAGCCCGGACTTGATCGGTCACTTGATCGGTTGA
CGGAGGTGCAGTGGCATATCGTCGGCTACGCCGATGTCCCGCGCTCGCTGGCCGAACTGATGGCTCACGCCGGCTATCGC
CAACGACCGCACTTCGTTGCCACGCATATGGAGCCGCTCCTAGCCGGCGGCGTACTGCGCCCAACTATCCCGGACAAGCC
GCGCTCGTCGCGGCAACGCTACGTGCTCACAGAAGCGGGCATCCAACTCAAGCTGCTGCACGAACAGGTCGCGGCCAAGC
CGGACGAAGAAAATGGATATTGA

Upstream 100 bases:

>100_bases
GCCACGCCGGATGAACTGCGCAAGCGGTTCGACGCGCTCATCAGCGAGCGGGGCAAGGGCAAGGACGCAACCAAACTCCG
GTTCGTGATCGAGTGACGCC

Downstream 100 bases:

>100_bases
AACCTCCGGGGCGATCAGGCTGTTTTTCCCCAACCCGTCGTTGACCCTCGTCTATTTTGAAGCGCTGGCCAATGCGCTGG
ATGCGGGCGCGACCGACGTG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>620_residues
MTRDDLVAALQSIEWNDIEFKEAAWAVPKDALSTVSAFANTEGGHLVFGVKQANGTFTVTGVTDADKIQNDFLGQVRDSN
KVSVFLPIGGTVHDLAEGTVLAFYIPEAERHQKPVYLDGNPKKAHIRRGGRDDTCTGDELLRFIRDASNIRYDAETLDVD
IGRCFDEASVRWYRARFAASNPGKDTAADDITFLRNWGFLVEQGGVLRPSRAAILVLGSGEYVRQVLPRMVTDVQLYRNA
STEYDSTVRWADRLSVEDNLIKAWQAIVEFYYRHSERPFAVDATTMRRDDDPPDYISFREAAINLLIHQDFGDTTRVPVI
RFFRDQTEFFNPGDAFASREQLLDPGDKEVRNPSIVSAFRRIGLSDQGGTGVRAIFDGWRKLGYLPPEIENRRAEKSFRL
RLCKVKLITEAQLLAQASLGAHLSEHEAAVFAFLLRSGQVDVADIKALTGLTGAQALDLAQRLTVQVLTEPLGEAAHTWR
LVPHLRTRFAAETAEDTTDQPTGAETVVAGATDQVTEQVAQEQPGLDRSLDRLTEVQWHIVGYADVPRSLAELMAHAGYR
QRPHFVATHMEPLLAGGVLRPTIPDKPRSSRQRYVLTEAGIQLKLLHEQVAAKPDEENGY

Sequences:
NA

Specific function: NA

COG id: COG2865

COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA