| Definition | Parvibaculum lavamentivorans DS-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009719 |
| Length | 3,914,745 |
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Identifier: 154251353
GI number:
Start: 965851
End: 967926
Strand: Reverse
Name: Not Available
Synonym: Plav_0897
Alternate gene names: NA
Gene position: NA
Preceding gene: 154251357
Following gene: 154251352
Centisome position: NA
GC content: NA
Gene sequence:
>2076_bases TTGTCCGAGGACGACGACATCGATCCGCACTATCCGATGCGCGAGCAATTCCGCCGCGCGCGGACTGAGCGCGACATGCC GCCTCCGGATTTCGCCGAGGAAGAGCCGCGGCCAGCCGCGCAACCCTGGCGCTTTCCCCGTCCTGGCATACTCGGGATTG TCTCCTTTTCGGTCACTGCATTCGTGGCCGGGTTCATCGCCCTCGTCTTCATCACCCTTCCCGATCTCCAGCGCTCCATC GCGAAAGAGCAGACCGGCATGTTGTCGGTCACAGTCCTTGACGCAAAGGGCGACGAGGTCGGAAGCCGCGGCCGCCGCAC CGCGCCTACCGTGCCGCTGGGCGAAATGCCGCCTTATCTCATCAAGGCTGTTCTCGCGACGGAAGATCGCCGCTTCTACG AACATGGCGGTTTCGACGCCCGAGGCATCGCGCGTGCGATGTGGCGAAACCTGCGCTCCTTCGGCTTTGTCGAGGGCGGT TCGACCATCACGCAACAGGTAGCGAAAAATCTCTATCTCGATAACAGCCGCACCATCTGGCGCAAGGCGCAGGAAGCCCT TATCACGCTTTGGCTCGAGAATAATCTGAGCAAGGAAGAAATTCTCACTCTCTATCTTAATCGCATCTATATGGGCGCCG GCAACTACGGCATGGACGCCGCCGCGCGCTACTACTTCGGCAAATCCGTGCGAGATGTGTCGCTGCCGGAAGCAGCGGTG CTGGCCGGGCTGCCCAAGGCGCCGACACGCTATGCGCCGACGAACGATCTGGCGCAGGCTCGCGCGCGCGCCAACCAGGT TCTTGACCGGCTCGTCTCCTCCGGCAGCCTGACCGCGGAGGAGGTTGCCGGTGCCCGCCAGCATCCCGCCGAAGTGCTTG CACGACGAGAAGGCGAAGGCCGCGAATATTTCGTCGATTGGGTCGCCGAACAGGTTCGCACGCTCTTTCCGGACGCGACC GGCCGCTTTATCGTCCACACGACGCTCGACCCGCGCCGCCAGGCGGCTGCAGAGAAAGCCGTCGAAGAGGCATTGAGCGA GGCGGGCAAGGAACGTCATGTTTCGCAAGGCGCGCTCGTCGCGCTGGCACCGGACGGCGCCGTGCTCGCCATGGTGGGCG GCCGCTCCTATGTCGAAAGCCAGTTCAACCGCGCCGCACAGGCAAAACGTCAGCCCGGCTCCGCCTTCAAACCCATCGTC TATCTGGCCGCGCTCGAAACCGGGTATACGCCGGACAGTCCGGTTACGGACGAACCTGTTTCGATGGGCGGCTGGACGCC GCGCAACGCCTCGACGCGCGACTGGGGCACAGTCAGTCTCGCAACCGCACTTTCGAATTCTATCAACACGATCTCTGTGC AGGTCGGCGACAAAGTCGGCATCGACCGGATCACGGCCTCCGCCCGCCGTCTCGGCATTGAAAGCGCGCTGCCTCGCAAT CTCTCCGTGGTGCTCGGCAGTGCCGAAGTCAGCCTTCTGGAGTTGACCTCCGCCTATTCAGCCTTCGGCAACGAGGGCCG CCGCGCGACGCCCTATGGCATCAGCCGCATCGAAGCCGAGAATGGCGACGTGGTTTACCGTCACGAACCGGCCGAAGCAC AGGCGATCACCCGCGCCCAGGCGCATGACATGACCTATATGCTGCGTCAGGTAATGACGGAGGGCACAGGTCGCGGGGCC GCGCTGGGCGATCGCCTCGCGGCTGGCAAAACCGGCACCAGCCAGGATTATCGCGACGCCTGGTTTGTGGGCTACACGGG CCGCGAGGTTGCGGGCGTCTGGTTCGGCAATGACGACAACACGCCGACCGGCGGCGCTTCGGGCGGCAACTTCGCCGCCG TCGCATGGCGCAATTACATGGCCGCAGCCGAGGCCGGGCAGCCGCCCGCTCCGCTTCCCGGCGCGGCCCGCAACCGCGAA GCGCCCGTGGTGGCCGCAACCCGCGCGCGCAGCGGCTTTTTTACGGAGCTCTCGGACCTCTTCAACGCCGCGCCGAAGCT CGAAGCCCGCAATGACGAGAGTTGGGGCGGCGGGTTCCGGCGCGGGGGGCAGACGATCGAGCGCGGCAAGCGCTGA
Upstream 100 bases:
>100_bases CGGCCAGTCTCGATTTGACGCGGCAGGGGTTGGCATGGCGCTCGCATGAAAATCCCGGCCCCCTGCATGTCCGCATTGGG ATTCAACGAGGCGGTTAACC
Downstream 100 bases:
>100_bases GATTTGCGTCGTCACGCGCGATGCGCCATACAGGCGGCGGTAAATCTCAACAGGTTCTCGAAAATTGGCCGCACCGCTTC TCGCTCTTCGGGACATTCGC
Product: 1A family penicillin-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>691_residues MSEDDDIDPHYPMREQFRRARTERDMPPPDFAEEEPRPAAQPWRFPRPGILGIVSFSVTAFVAGFIALVFITLPDLQRSI AKEQTGMLSVTVLDAKGDEVGSRGRRTAPTVPLGEMPPYLIKAVLATEDRRFYEHGGFDARGIARAMWRNLRSFGFVEGG STITQQVAKNLYLDNSRTIWRKAQEALITLWLENNLSKEEILTLYLNRIYMGAGNYGMDAAARYYFGKSVRDVSLPEAAV LAGLPKAPTRYAPTNDLAQARARANQVLDRLVSSGSLTAEEVAGARQHPAEVLARREGEGREYFVDWVAEQVRTLFPDAT GRFIVHTTLDPRRQAAAEKAVEEALSEAGKERHVSQGALVALAPDGAVLAMVGGRSYVESQFNRAAQAKRQPGSAFKPIV YLAALETGYTPDSPVTDEPVSMGGWTPRNASTRDWGTVSLATALSNSINTISVQVGDKVGIDRITASARRLGIESALPRN LSVVLGSAEVSLLELTSAYSAFGNEGRRATPYGISRIEAENGDVVYRHEPAEAQAITRAQAHDMTYMLRQVMTEGTGRGA ALGDRLAAGKTGTSQDYRDAWFVGYTGREVAGVWFGNDDNTPTGGASGGNFAAVAWRNYMAAAEAGQPPAPLPGAARNRE APVVAATRARSGFFTELSDLFNAAPKLEARNDESWGGGFRRGGQTIERGKR
Sequences:
NA
Specific function: NA
COG id: COG0744
COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA