Definition Parvibaculum lavamentivorans DS-1 chromosome, complete genome.
Accession NC_009719
Length 3,914,745

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Identifier: 154250704

GI number:

Start: 267984

End: 269864

Strand: Reverse

Name: Not Available

Synonym: Plav_0248

Alternate gene names: NA

Gene position: NA

Preceding gene: 154250705

Following gene: 154250703

Centisome position: NA

GC content: NA

Gene sequence:

>1881_bases
ATGAAGAAACCTCTCTCCGTCTCACGGCGGCAGATGCTTGCACTGACCGGTGGCGCTGCTGTGGCGGCGTATCTGCCGTC
ATCCGGGTTACAAGCCGCACCCGCCCGCCGAAGCCACGGCATGTCGATTTTCGGAGAACTTAAATACGGCGCGGATTTCC
AGCACTTCGACTATGTGAATCCGTTGGCGCCGAAGGGGGGCGTGTTTTCGCAGATCGGGCCCGTTGCCGCTTTCAACGCT
TCGTTTTATACGTTCGACACCCTTAACGGATATATCCTGAAGGGAAACGCCCCACAGGGTCTGCATCATATCTTCGATAC
ACTTATGGTGCGCGCGTTCGACGAACCCGACGCGCTTTACGGGTTGCTCGCAGAGAGTGTCGAGGCGTCGGACAATGGCA
ATTTGTACACGTTCCATCTGCGCGATGGGGCACGCTTTCACGACGGAACCAAGGTCACAGCGGAAGATGCCGCCTTTTCA
TTCGCTCTTTTGAAAGAGAAGGGACACCCGCTCATTGCGCAGAATTTGAAGGAAATGGCCGCTGCCGAGGCGCGCGACGA
GGCGACACTCGACATCCGTTTTACCGGAGCGCAAACGCGGGACCTTCCTCTTTTCATCGCAGGCGTGCTGCCAGTGTTCT
CGAAGTCGTTTTACACCGAGAATGATTTTTCGGCTGCTTCGCTGAAGGCGCCGCTGGGGAGCGGCCCCTACCGCATCGGG
GACTTCCGCGCTTCCCGCTTCATCAACTACCAAAGAGTGGATGAGTACTGGGGCCGCGATCTTCCGGTGAACAGAGGGAA
GTGGAATTTCGACCGCCTGCGCTATGAGTATTTTCGTGACCGCACGGCACAGTTCGAAGCGTTCAAGGCGGGGAATTATC
TCTTCCGGGAAGAGTTCACATCGAAAACCTGGGCGACGGAATATAACTTTCCTGCCGTCAAGGACGGACGCGTGAAACTT
GTGACGTTGCCGGACAATACGCCTTCCGGAGCACAAGGCTGGTTCCTCAACACACGGAGAGAGAAGTTCCAGGATCGCCG
GGTGCGGGAAGCTCTTGGCCTTGCTTTCGATTTCGAGTGGACGAACAAGAATCTCTTCTACGGCCTGTACAAGCGCACCG
AGAGCTATTTTGAAAACTCTCCGATGAAAGCGAGCGGCGAGCCCGACGGCGCGGAACTGGCTTTGCTGGAACCGTGGCGG
GATGACCTTCCGCCTGAGGTATTTGGCGCGGCCATCACGCCGCCTGCGAGCGACGGATCCGGGCAGGACCGCCGGCTGCT
CCGGCGCGCAGCAAGCTTGCTCGACGAATCCGGATGGCGCATCGCGCGAGGCGGGCTTCGCCGCAATGAAGCGGGAGAAG
TGCTTTCAGTCGAATTTCTCGACGATGAGCCAATGTTCGAGCGGATCGTCGCGCCGCTCGTGAAGAACCTCAAGCTTCTC
GGCATTGACGCCCGGATCAGACAAGTCGATACGGCTCAGTATCAAGACCGTATGAATAACTACGATTTCGACGCTTCGAT
AAGGCGCTATTCTCTCGGATTGACACCCGGCATCGAAATTCGAAGCTATTGGCATTCCGATTTCGCAAATGTCCCGGGCG
GCCGCAATCTCTCGGGGATTTCGAATCCTGCAATCGATGCATTGATCGAAAAGATCATCGCGGCGGATAATCGTGAGGAC
CAGGTCGTCGCGGCGCGGGCTCTCGACCGTGTGCTGCGGGCGGGACATTACTGGATTCCCCAATGGCACAAGAACCTCCA
TCATCTCGCGTTCTGGGACGTATTTGCATGGCCCGACGTCAAACCGGCCTATGACCGCGGGGTTGAGGCCACCTGGTGGG
CCGCCACGGAAGAGGCCATCCCTTCGGGCAGTGAGGACTGA

Upstream 100 bases:

>100_bases
AGCATCCGGAGAAAATGCCGCCATACTCCATTGGCTTTCCGACAATCTGGTGGATGGACCAATCCGCACCCGCACCGCAA
CCGGCGGCGGAAGAAGCGCG

Downstream 100 bases:

>100_bases
CACCCATGTCCGCCTATATCATCCGCCGCCTGCTGCTCATGATCCCGACTATTTTCGGCATCATGCTTGTCAGTTTTATC
CTCGTGCAGTTTGCACCCGG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>626_residues
MKKPLSVSRRQMLALTGGAAVAAYLPSSGLQAAPARRSHGMSIFGELKYGADFQHFDYVNPLAPKGGVFSQIGPVAAFNA
SFYTFDTLNGYILKGNAPQGLHHIFDTLMVRAFDEPDALYGLLAESVEASDNGNLYTFHLRDGARFHDGTKVTAEDAAFS
FALLKEKGHPLIAQNLKEMAAAEARDEATLDIRFTGAQTRDLPLFIAGVLPVFSKSFYTENDFSAASLKAPLGSGPYRIG
DFRASRFINYQRVDEYWGRDLPVNRGKWNFDRLRYEYFRDRTAQFEAFKAGNYLFREEFTSKTWATEYNFPAVKDGRVKL
VTLPDNTPSGAQGWFLNTRREKFQDRRVREALGLAFDFEWTNKNLFYGLYKRTESYFENSPMKASGEPDGAELALLEPWR
DDLPPEVFGAAITPPASDGSGQDRRLLRRAASLLDESGWRIARGGLRRNEAGEVLSVEFLDDEPMFERIVAPLVKNLKLL
GIDARIRQVDTAQYQDRMNNYDFDASIRRYSLGLTPGIEIRSYWHSDFANVPGGRNLSGISNPAIDALIEKIIAADNRED
QVVAARALDRVLRAGHYWIPQWHKNLHHLAFWDVFAWPDVKPAYDRGVEATWWAATEEAIPSGSED

Sequences:
NA

Specific function: NA

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA