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The map label for this gene is recJ [H]

Identifier: 154248669

GI number: 154248669

Start: 5274130

End: 5276010

Strand: Direct

Name: recJ [H]

Synonym: Xaut_4751

Alternate gene names: 154248669

Gene position: 5274130-5276010 (Clockwise)

Preceding gene: 154248668

Following gene: 154248670

Centisome position: 99.34

GC content: 73.79

Gene sequence:

>1881_bases
TTGTCGTCCTGCTGGTGGCGCAGGGGTGGTGATCGCTTCCGGTCGCTCGACGCGAGGGGCTGCATCTGGCTTGATGCGCC
CGTGAACATAGCCTTGCCGAATCGCCTCTTCCTCGACGTCGCCCGTTCCGCCACCGGCCGCACCTGGCGCGAGCGCCTGG
ACGTGCGCGGCGCCCAGACCGCCCTCGCCATGGCCCAGCGCACCGGCATCAGCGAGCTGCTGGCCCGCGTGCTGGCCGGC
CGCGACGTGCCGCTCGACGGGGTGGAGCAATATCTCGACCCCTCCATCCGCACCCTTCTGCCGGATCCCGACACCCTCAC
TGACATGGGCGCCGCCGTGGCGCGCCTGTCGCGCGCGGTGACGAGCGGCGAGCAGGTGGCGGTGTTCGGCGACTATGACG
TGGACGGCGCCTGCGCCACCGCCCTCATGGTGGGCGTGCTGCGGGCGGCGGGCCTCGATCCACTGTTCCACATCCCCGAC
CGCATCTTCGAGGGCTATGGCCCCAACGTGCCGGCCATCGAGCAACTGGCGGCGCGCGGCGTCACGCTGCTGGTGACGGT
GGATTGCGGCACCACCTCCATGGAGCCGCTCGCCGCTGCCCGGCGCCTCGGCATGGATACGGTGGTGATCGACCACCACC
AGTCCGGCGAGCGCCTGCCGGACGCCGCCGCCATCGTGAACCCCAACCGGGAGGACGACCTCTCGGGCCTCGGCCATGTG
TGCGCGGCGGGCCTCGCCTTCATCACCGCGGTGGGGCTGGTGCGGGCGTTGCGCCAGAACGGCCATTTCAACACCGCCCG
CCCGGCCCCGGACCTGCTGGACACCCTCGATCTGGTGGCGCTCGCCACCGTGGCCGACGTGGTGCCGCTGAAGGGCCTCA
ACCGCGCCTTCGTCACCAAGGGCCTCCTTGCCATGCGCCGGCGCGGCCGCATCGGCCTCACCGCGCTGATGGACGCGGCC
CGGCTCGACGGGCCGCCACGCCCGTTCCATCTCGGCTTCCTCATCGGCCCGCGCATCAATGCCGGCGGGCGCATCGGCGA
GGCGACGCTGGGGGCGAAATTGCTCCTCACCCAGGACCCGGCCGAGGCCCGCCAGATCGCCGCCGAGCTGGACCGGCTCA
ACGGCGAACGGCAGGAGGTGGAGCGCGCCATCCTCGCCGCCGCCGAGGCGGAGGCCGAGGCCGCGCTGGGCCTCAGCGAC
GAAGGCTCGGTGATCGTGGTGAGCGGGGATGGCTGGCACCCCGGCGTCGTGGGCCTCGTGGCGTCGCGGCTGAAGGAGCG
CTTCCAGCGCCCCGCCTTCGCCATCGCCTTCAACGGGGAGACCGGCACCGGCTCCGGCCGCTCGCTGCCCGGCGTCGACA
TCGGCCGGGCCGTGCGCGCGGCGCTGGAGGCAGGACTGCTGGTGAAGGGCGGCGGCCATGCCATGGCGGCCGGACTCACG
GTGGAACGCGCGCGCCTCGGTGCCTTGCGCGCAGCCTTCGAGGAGCGCCTCGCCGCCGACGTGGCGCGGGCGCGGGCCGA
GGGCACGCTGTCCATCGACGGCGCCCTCACCGCGCGGGGGGCGACGACGGACCTCGTCGAGATGGTCTCCCGCGCCGGCC
CGTTCGGCGCCGGCAATGGGGAGCCGGTGTTCGCCTTTCCCGGCCATCGCATCAGCTATGTGGAGAGCTTTGGCGCCGGC
CATGTGCGGGCGCGCATCTCATCCCCAGACGGCACCACCCTGAAGGCCACCGCCTTCCGCTGCGCCGAGGAGCCGCTCGG
CCGCGCCCTGCTGGCCGCGCGCGGGCGGCCCCTGCACGTGGCCGGCAGCCTGGAACTGGACACCTGGCAGGGCGAGACCC
GCGTGGCGCTGCGCATGCGCGACGTGGCCGAGCCCGGCTGA

Upstream 100 bases:

>100_bases
ATGAATGCGCTGGGGCGGGTGGGGTTCGCGGCGGCGGCAGGGCCCGCCGGCTTCACCCTGCGTCTCGGCGCGGCCACCGC
CGCGGCGGCGGGAGCGGCGC

Downstream 100 bases:

>100_bases
GGCGCGGCCGGCCCGGCAGTCCTTGGCGTGTGGCTGACAGGTTGAGCCAACCGATCGAGATAACAGAGGCTTCTTCCGTG
AAGGGACTGCTCACGATCCT

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 625

Protein sequence:

>626_residues
MSSCWWRRGGDRFRSLDARGCIWLDAPVNIALPNRLFLDVARSATGRTWRERLDVRGAQTALAMAQRTGISELLARVLAG
RDVPLDGVEQYLDPSIRTLLPDPDTLTDMGAAVARLSRAVTSGEQVAVFGDYDVDGACATALMVGVLRAAGLDPLFHIPD
RIFEGYGPNVPAIEQLAARGVTLLVTVDCGTTSMEPLAAARRLGMDTVVIDHHQSGERLPDAAAIVNPNREDDLSGLGHV
CAAGLAFITAVGLVRALRQNGHFNTARPAPDLLDTLDLVALATVADVVPLKGLNRAFVTKGLLAMRRRGRIGLTALMDAA
RLDGPPRPFHLGFLIGPRINAGGRIGEATLGAKLLLTQDPAEARQIAAELDRLNGERQEVERAILAAAEAEAEAALGLSD
EGSVIVVSGDGWHPGVVGLVASRLKERFQRPAFAIAFNGETGTGSGRSLPGVDIGRAVRAALEAGLLVKGGGHAMAAGLT
VERARLGALRAAFEERLAADVARARAEGTLSIDGALTARGATTDLVEMVSRAGPFGAGNGEPVFAFPGHRISYVESFGAG
HVRARISSPDGTTLKATAFRCAEEPLGRALLAARGRPLHVAGSLELDTWQGETRVALRMRDVAEPG

Sequences:

>Translated_626_residues
MSSCWWRRGGDRFRSLDARGCIWLDAPVNIALPNRLFLDVARSATGRTWRERLDVRGAQTALAMAQRTGISELLARVLAG
RDVPLDGVEQYLDPSIRTLLPDPDTLTDMGAAVARLSRAVTSGEQVAVFGDYDVDGACATALMVGVLRAAGLDPLFHIPD
RIFEGYGPNVPAIEQLAARGVTLLVTVDCGTTSMEPLAAARRLGMDTVVIDHHQSGERLPDAAAIVNPNREDDLSGLGHV
CAAGLAFITAVGLVRALRQNGHFNTARPAPDLLDTLDLVALATVADVVPLKGLNRAFVTKGLLAMRRRGRIGLTALMDAA
RLDGPPRPFHLGFLIGPRINAGGRIGEATLGAKLLLTQDPAEARQIAAELDRLNGERQEVERAILAAAEAEAEAALGLSD
EGSVIVVSGDGWHPGVVGLVASRLKERFQRPAFAIAFNGETGTGSGRSLPGVDIGRAVRAALEAGLLVKGGGHAMAAGLT
VERARLGALRAAFEERLAADVARARAEGTLSIDGALTARGATTDLVEMVSRAGPFGAGNGEPVFAFPGHRISYVESFGAG
HVRARISSPDGTTLKATAFRCAEEPLGRALLAARGRPLHVAGSLELDTWQGETRVALRMRDVAEPG
>Mature_625_residues
SSCWWRRGGDRFRSLDARGCIWLDAPVNIALPNRLFLDVARSATGRTWRERLDVRGAQTALAMAQRTGISELLARVLAGR
DVPLDGVEQYLDPSIRTLLPDPDTLTDMGAAVARLSRAVTSGEQVAVFGDYDVDGACATALMVGVLRAAGLDPLFHIPDR
IFEGYGPNVPAIEQLAARGVTLLVTVDCGTTSMEPLAAARRLGMDTVVIDHHQSGERLPDAAAIVNPNREDDLSGLGHVC
AAGLAFITAVGLVRALRQNGHFNTARPAPDLLDTLDLVALATVADVVPLKGLNRAFVTKGLLAMRRRGRIGLTALMDAAR
LDGPPRPFHLGFLIGPRINAGGRIGEATLGAKLLLTQDPAEARQIAAELDRLNGERQEVERAILAAAEAEAEAALGLSDE
GSVIVVSGDGWHPGVVGLVASRLKERFQRPAFAIAFNGETGTGSGRSLPGVDIGRAVRAALEAGLLVKGGGHAMAAGLTV
ERARLGALRAAFEERLAADVARARAEGTLSIDGALTARGATTDLVEMVSRAGPFGAGNGEPVFAFPGHRISYVESFGAGH
VRARISSPDGTTLKATAFRCAEEPLGRALLAARGRPLHVAGSLELDTWQGETRVALRMRDVAEPG

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=562, Percent_Identity=35.2313167259786, Blast_Score=263, Evalue=2e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008279
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 65924; Mature: 65793

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSCWWRRGGDRFRSLDARGCIWLDAPVNIALPNRLFLDVARSATGRTWRERLDVRGAQT
CCCCCCCCCCHHHHCCCCCCEEEECCCCEEECCCHHHHHHHHHCCCHHHHHHHHCCHHHH
ALAMAQRTGISELLARVLAGRDVPLDGVEQYLDPSIRTLLPDPDTLTDMGAAVARLSRAV
HHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHH
TSGEQVAVFGDYDVDGACATALMVGVLRAAGLDPLFHIPDRIFEGYGPNVPAIEQLAARG
CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHCCHHHHHCCCCCCCHHHHHHHCC
VTLLVTVDCGTTSMEPLAAARRLGMDTVVIDHHQSGERLPDAAAIVNPNREDDLSGLGHV
EEEEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHH
CAAGLAFITAVGLVRALRQNGHFNTARPAPDLLDTLDLVALATVADVVPLKGLNRAFVTK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
GLLAMRRRGRIGLTALMDAARLDGPPRPFHLGFLIGPRINAGGRIGEATLGAKLLLTQDP
HHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHCEEEEEECCH
AEARQIAAELDRLNGERQEVERAILAAAEAEAEAALGLSDEGSVIVVSGDGWHPGVVGLV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHH
ASRLKERFQRPAFAIAFNGETGTGSGRSLPGVDIGRAVRAALEAGLLVKGGGHAMAAGLT
HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCEEEECCC
VERARLGALRAAFEERLAADVARARAEGTLSIDGALTARGATTDLVEMVSRAGPFGAGNG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEECCCCHHHHHHHHHHCCCCCCCCC
EPVFAFPGHRISYVESFGAGHVRARISSPDGTTLKATAFRCAEEPLGRALLAARGRPLHV
CEEEECCCCHHHHHHHCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEE
AGSLELDTWQGETRVALRMRDVAEPG
EECEEEECCCCCCEEEEEEHHCCCCC
>Mature Secondary Structure 
SSCWWRRGGDRFRSLDARGCIWLDAPVNIALPNRLFLDVARSATGRTWRERLDVRGAQT
CCCCCCCCCHHHHCCCCCCEEEECCCCEEECCCHHHHHHHHHCCCHHHHHHHHCCHHHH
ALAMAQRTGISELLARVLAGRDVPLDGVEQYLDPSIRTLLPDPDTLTDMGAAVARLSRAV
HHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHH
TSGEQVAVFGDYDVDGACATALMVGVLRAAGLDPLFHIPDRIFEGYGPNVPAIEQLAARG
CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHCCHHHHHCCCCCCCHHHHHHHCC
VTLLVTVDCGTTSMEPLAAARRLGMDTVVIDHHQSGERLPDAAAIVNPNREDDLSGLGHV
EEEEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHH
CAAGLAFITAVGLVRALRQNGHFNTARPAPDLLDTLDLVALATVADVVPLKGLNRAFVTK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
GLLAMRRRGRIGLTALMDAARLDGPPRPFHLGFLIGPRINAGGRIGEATLGAKLLLTQDP
HHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHCEEEEEECCH
AEARQIAAELDRLNGERQEVERAILAAAEAEAEAALGLSDEGSVIVVSGDGWHPGVVGLV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHH
ASRLKERFQRPAFAIAFNGETGTGSGRSLPGVDIGRAVRAALEAGLLVKGGGHAMAAGLT
HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCEEEECCC
VERARLGALRAAFEERLAADVARARAEGTLSIDGALTARGATTDLVEMVSRAGPFGAGNG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEECCCCHHHHHHHHHHCCCCCCCCC
EPVFAFPGHRISYVESFGAGHVRARISSPDGTTLKATAFRCAEEPLGRALLAARGRPLHV
CEEEECCCCHHHHHHHCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEE
AGSLELDTWQGETRVALRMRDVAEPG
EECEEEECCCCCCEEEEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1987126; 9278503; 2649886 [H]