| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is mutA [H]
Identifier: 154248647
GI number: 154248647
Start: 5247318
End: 5249150
Strand: Direct
Name: mutA [H]
Synonym: Xaut_4729
Alternate gene names: 154248647
Gene position: 5247318-5249150 (Clockwise)
Preceding gene: 154248646
Following gene: 154248648
Centisome position: 98.84
GC content: 72.39
Gene sequence:
>1833_bases ATGACCGCCCTGCCCTTCGCGACCAACCTTGCCCCCGTCACCCGCGAGGACTGGCTGAAGCTGGTCGAGGGCGTGCTGAA GGGCGCGCCCTACGACAAGCGCCTCGTCACCCGCACCTATGAGGGCCTCACCCTCGACGCTTTGCCCGAGCGCAAGGTGA AGGCCCCCATCGTGGCGGGGCGGCCGGCCGGCGCGCCGTGGGTTATCAGCGCCCGGGTGGACCAGCCGGACCTCGCCGCC GCCCACGCGCAGGCGCTGGAGGACCTCGACGGCGGCGCCTCCGGCCTTGCCCTGGTCTATGCTTCCTCGCCCTCGGCCTA TGGCTTCGGCCTGCCGGACGGCGCCGACCTGAAGGTGGTGCTCAAGGACGTGCTGCTCGACCTCATCGAGACGCGCATCG AGAGCGGCGCCTTCCAGGGTCGCGGCGAAGACCTCGCCTTCGCCGATCATGCGGAAGCCGCGGGCTTCGATCCAAAGGGC CTCGCCGTTTCCTTCGGCCTGAACCCGCTGGGGGATTTCGCCGCCGCGGGCACCCTGCCCATGGCGTGGCCGCTGCTCGC CAAGCGCTTCGCCGAGACCTCCGCCATTCTTGCGGCGCGCGGCTTTGCCGGGCCGTTCGCGCGGGCGGACGGCGGCGTGT TCCATGCGGCCGGAGCATCGGACGCTCAGGAGCTGGCGGCGGTGCTCGCCACCGCCGTGGCCTATCTCAAGGCCTATGGG GAGGCCGGCATCGCCCTGTCGGAGGCGGCGGCGCGCATCGAGGTCGCCCTGGTGGCGGACCTGAACCAGACCGCCACCAT CGCCAAGTTCCGCGCCATCCGCCTGCTGTGGGGCGCGGTGCTGCGCGAATGCGGCCTGCCCGAAACCGCGCTGAAGGTGC ACGCCACCACCGCGTGGCGCTCGCTGACCCGGCGCGATCCTTATGTGAACCTGCTGCGCAACACGGTGGCGGCGTTCGCG GCCGGCGTGGGCGGGGCGGACAGCCTCACGGTGCTGCCCTTCACCCAGGCGCTGGGCCTGCCCGACGCCTTCGCCCGGCG CCTTGCCCGCAACACCCAGGTGATGCTGCTGGAGGAGAGCAACGTCCACCGCGTGGCAGATCCCGGCGCCGGCGCCGGCG CGGTTGAGGCCCATACCGACGGGCTCGCCGAAAAGGCGTGGGACCTGTTCCGCACCATCGAGAAGCGCGGCGGCATGGCC GACGTGCTGGAGGACCGATGGCTGAAGGCCGAGATCACCGAGGTGAAGGCCCGCCGCGACAAGGATGTGGCCACCCGCAA GGCGCCCATCACCGGCACCTCGGAATTCCCCATCCTGGTGCAGCAGGCGCCGGAAGTGCTGGCGCCTCTGCCCGCCACCT TCGAGCCCGTGGCCGACGGCGCACTGACGCCCCATCGTATTGCCGAGCCGTTCGAGGCCCTGCGCGACAAGGCGGAAGCC GCCGCCCAGGCGCCGGCCGTCTTCCTCGCCACGCTCGGTTCCGTCGCCGCCTTCACGGCGCGCGCCGGCTTCGCCAAGAA CTTCTTCGAAGCCGGCGGCATCGCCGCCCCCGTCCCGGACGGCTTCGCCGACCGCGACGCGCTGGTAGCCGCCTTCAAGG CCTCCGGCACGCCGTTCGCCTGCCTCGTCTCCTCGGACGAGATCTACGGCGCCGAGGGCGCCGCAACAGCCGAGGCCCTG AAGGTTGCGGGCGCCAGCGCCATCTGGCTCGCCGGCAAGCCCGCCGAGCTGGAGGCGGCGCTCAAGGCGGCGGGCGTTTC CGGCTTCATCTTCGCCGGCTGCGACGTGCTGGAGACGCTGACCGCCGCGCAGGCGGCGGCGGGACTGGCCTGA
Upstream 100 bases:
>100_bases CGGGAGGGGTGGTGATGGACACCGGTTTCACCGATCCCCGGCATGACGCTGCCGTGAAGCACCCTGTTTTTCTCCTGTTC CCTCTCCCGGAGGTCCGCTC
Downstream 100 bases:
>100_bases GCGGGCAGGACGGGAGGCGAGCCATGGTGCACAAGATTGCGGGCCTCACCGCCCTCGCGCTCCTCTCGGCGGCCGCCGTT GGCCCCGCCCGCGCCGACAA
Product: methylmalonyl-CoA mutase
Products: NA
Alternate protein names: MCM-beta [H]
Number of amino acids: Translated: 610; Mature: 609
Protein sequence:
>610_residues MTALPFATNLAPVTREDWLKLVEGVLKGAPYDKRLVTRTYEGLTLDALPERKVKAPIVAGRPAGAPWVISARVDQPDLAA AHAQALEDLDGGASGLALVYASSPSAYGFGLPDGADLKVVLKDVLLDLIETRIESGAFQGRGEDLAFADHAEAAGFDPKG LAVSFGLNPLGDFAAAGTLPMAWPLLAKRFAETSAILAARGFAGPFARADGGVFHAAGASDAQELAAVLATAVAYLKAYG EAGIALSEAAARIEVALVADLNQTATIAKFRAIRLLWGAVLRECGLPETALKVHATTAWRSLTRRDPYVNLLRNTVAAFA AGVGGADSLTVLPFTQALGLPDAFARRLARNTQVMLLEESNVHRVADPGAGAGAVEAHTDGLAEKAWDLFRTIEKRGGMA DVLEDRWLKAEITEVKARRDKDVATRKAPITGTSEFPILVQQAPEVLAPLPATFEPVADGALTPHRIAEPFEALRDKAEA AAQAPAVFLATLGSVAAFTARAGFAKNFFEAGGIAAPVPDGFADRDALVAAFKASGTPFACLVSSDEIYGAEGAATAEAL KVAGASAIWLAGKPAELEAALKAAGVSGFIFAGCDVLETLTAAQAAAGLA
Sequences:
>Translated_610_residues MTALPFATNLAPVTREDWLKLVEGVLKGAPYDKRLVTRTYEGLTLDALPERKVKAPIVAGRPAGAPWVISARVDQPDLAA AHAQALEDLDGGASGLALVYASSPSAYGFGLPDGADLKVVLKDVLLDLIETRIESGAFQGRGEDLAFADHAEAAGFDPKG LAVSFGLNPLGDFAAAGTLPMAWPLLAKRFAETSAILAARGFAGPFARADGGVFHAAGASDAQELAAVLATAVAYLKAYG EAGIALSEAAARIEVALVADLNQTATIAKFRAIRLLWGAVLRECGLPETALKVHATTAWRSLTRRDPYVNLLRNTVAAFA AGVGGADSLTVLPFTQALGLPDAFARRLARNTQVMLLEESNVHRVADPGAGAGAVEAHTDGLAEKAWDLFRTIEKRGGMA DVLEDRWLKAEITEVKARRDKDVATRKAPITGTSEFPILVQQAPEVLAPLPATFEPVADGALTPHRIAEPFEALRDKAEA AAQAPAVFLATLGSVAAFTARAGFAKNFFEAGGIAAPVPDGFADRDALVAAFKASGTPFACLVSSDEIYGAEGAATAEAL KVAGASAIWLAGKPAELEAALKAAGVSGFIFAGCDVLETLTAAQAAAGLA >Mature_609_residues TALPFATNLAPVTREDWLKLVEGVLKGAPYDKRLVTRTYEGLTLDALPERKVKAPIVAGRPAGAPWVISARVDQPDLAAA HAQALEDLDGGASGLALVYASSPSAYGFGLPDGADLKVVLKDVLLDLIETRIESGAFQGRGEDLAFADHAEAAGFDPKGL AVSFGLNPLGDFAAAGTLPMAWPLLAKRFAETSAILAARGFAGPFARADGGVFHAAGASDAQELAAVLATAVAYLKAYGE AGIALSEAAARIEVALVADLNQTATIAKFRAIRLLWGAVLRECGLPETALKVHATTAWRSLTRRDPYVNLLRNTVAAFAA GVGGADSLTVLPFTQALGLPDAFARRLARNTQVMLLEESNVHRVADPGAGAGAVEAHTDGLAEKAWDLFRTIEKRGGMAD VLEDRWLKAEITEVKARRDKDVATRKAPITGTSEFPILVQQAPEVLAPLPATFEPVADGALTPHRIAEPFEALRDKAEAA AQAPAVFLATLGSVAAFTARAGFAKNFFEAGGIAAPVPDGFADRDALVAAFKASGTPFACLVSSDEIYGAEGAATAEALK VAGASAIWLAGKPAELEAALKAAGVSGFIFAGCDVLETLTAAQAAAGLA
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates. This conversion most likely represents an important source of building blocks for polyketide antibiotic biosynthes
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methylmalonyl-CoA mutase family [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=242, Percent_Identity=35.5371900826446, Blast_Score=135, Evalue=1e-31, Organism=Escherichia coli, GI1789284, Length=234, Percent_Identity=35.042735042735, Blast_Score=136, Evalue=3e-33, Organism=Caenorhabditis elegans, GI25144500, Length=241, Percent_Identity=34.8547717842324, Blast_Score=140, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR004608 [H]
Pfam domain/function: PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 63160; Mature: 63029
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALPFATNLAPVTREDWLKLVEGVLKGAPYDKRLVTRTYEGLTLDALPERKVKAPIVAG CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEECCCCCCCCCCCEEEC RPAGAPWVISARVDQPDLAAAHAQALEDLDGGASGLALVYASSPSAYGFGLPDGADLKVV CCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHH LKDVLLDLIETRIESGAFQGRGEDLAFADHAEAAGFDPKGLAVSFGLNPLGDFAAAGTLP HHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCC MAWPLLAKRFAETSAILAARGFAGPFARADGGVFHAAGASDAQELAAVLATAVAYLKAYG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHC EAGIALSEAAARIEVALVADLNQTATIAKFRAIRLLWGAVLRECGLPETALKVHATTAWR CCCCCHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEHHHHHH SLTRRDPYVNLLRNTVAAFAAGVGGADSLTVLPFTQALGLPDAFARRLARNTQVMLLEES HHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCHHHHHHHHCCCEEEEEECC NVHRVADPGAGAGAVEAHTDGLAEKAWDLFRTIEKRGGMADVLEDRWLKAEITEVKARRD CCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC KDVATRKAPITGTSEFPILVQQAPEVLAPLPATFEPVADGALTPHRIAEPFEALRDKAEA CCHHHCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHH AAQAPAVFLATLGSVAAFTARAGFAKNFFEAGGIAAPVPDGFADRDALVAAFKASGTPFA HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCEE CLVSSDEIYGAEGAATAEALKVAGASAIWLAGKPAELEAALKAAGVSGFIFAGCDVLETL EEEECCCEECCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHH TAAQAAAGLA HHHHHHHCCC >Mature Secondary Structure TALPFATNLAPVTREDWLKLVEGVLKGAPYDKRLVTRTYEGLTLDALPERKVKAPIVAG CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEECCCCCCCCCCCEEEC RPAGAPWVISARVDQPDLAAAHAQALEDLDGGASGLALVYASSPSAYGFGLPDGADLKVV CCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHH LKDVLLDLIETRIESGAFQGRGEDLAFADHAEAAGFDPKGLAVSFGLNPLGDFAAAGTLP HHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCC MAWPLLAKRFAETSAILAARGFAGPFARADGGVFHAAGASDAQELAAVLATAVAYLKAYG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHC EAGIALSEAAARIEVALVADLNQTATIAKFRAIRLLWGAVLRECGLPETALKVHATTAWR CCCCCHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEHHHHHH SLTRRDPYVNLLRNTVAAFAAGVGGADSLTVLPFTQALGLPDAFARRLARNTQVMLLEES HHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCHHHHHHHHCCCEEEEEECC NVHRVADPGAGAGAVEAHTDGLAEKAWDLFRTIEKRGGMADVLEDRWLKAEITEVKARRD CCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC KDVATRKAPITGTSEFPILVQQAPEVLAPLPATFEPVADGALTPHRIAEPFEALRDKAEA CCHHHCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHH AAQAPAVFLATLGSVAAFTARAGFAKNFFEAGGIAAPVPDGFADRDALVAAFKASGTPFA HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCEE CLVSSDEIYGAEGAATAEALKVAGASAIWLAGKPAELEAALKAAGVSGFIFAGCDVLETL EEEECCCEECCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHH TAAQAAAGLA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8099072 [H]