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The map label for this gene is oruR [H]

Identifier: 154248582

GI number: 154248582

Start: 5154325

End: 5155368

Strand: Reverse

Name: oruR [H]

Synonym: Xaut_4663

Alternate gene names: 154248582

Gene position: 5155368-5154325 (Counterclockwise)

Preceding gene: 154248586

Following gene: 154248581

Centisome position: 97.11

GC content: 71.84

Gene sequence:

>1044_bases
TTGCCATGTAGGAGCCTCGCCCTGGAACGGCGCATGATTTCCGCCGGCTTCGTGGACGACGCGCTGGACTGTCTTGTCCG
GCGCGGCATCGATCCCGCGCCGGTGCTGGCGCAGGCGGGGCTTGCCGTGCCGTTCGGGGACGCGGTCTCCGCCGAGCAGT
ATGGCGCCCTGTGGCTGGCCGTTTCGCAGGCGCTGGACGACGAGTTCTTCGGCCTCGGTGGCCGGCCCATGCGGCCGGGC
AGCTTCACGCTGTTGTGTCACGCGCTGATGGGCGCCGCGACGCTGGAGCAGGCCCTGCGCCGCGCGCTGCGCTTCCTGAA
GGTGGTGCTGGACGATCCCGAAGGCGAGCTTCAGGTGGCGGAGGGGCTCGCCGCCATCGTGCTGAAGGATACCGGTGCCG
CGCGCTCGGCCTTCGCCTATCGCACCTACTGGATCATCGTCCACGGCATCACCTGCTGGCTGGTGGGTCGGCGCATCCCG
CTGCGGCAGGTGGATTTCCGCTGCGGCCCGCCGGAGCATGGCGCCGACTATCGCCTGTTCTTCGGCGCGCCGGTGCGGTT
CGACCAGCCGCACAGCCGGCTCGCCTTCGATGCCGCCTTCCTCACCTTGCCGACGACCCGCGGCGAACGGGCGTTGAAGG
AGTTCCTGCGCGGGGCGCCGGCCAACATTCTGGTGCGCTACCGGCACGACCAGGGCCTCGCCGCGCGCGTGAAAGCCCGC
CTGCGCGCTGTGCCGGCCACCGCCTGGCCCGGCTTTGAAGACCTCGCCCGGCAACTGCGGCTTCCCGCCTCCACCCTGCG
CCGGCGCCTTGCCGACGAGGGCCAGACCTATCGCGACATCAAGGACGAACTGCGCCGGGTGCTGGCCGAGGCGCTGCTGC
GGGAGGGGGCGAAGCCGGTGGGCGAGATCGCGGCGGAGCTGGGCTTCTCCGAGCCCAGCGCCTTCCATCGCGCCTTCCGC
AAATGGACGGCGCAAAGCCCCGGCGCCTTCCGGCGGGTCAGCGGGGCGGCGGGCCACGACGAGGTGGCGGCGGGCCGCAT
TTGA

Upstream 100 bases:

>100_bases
CTCTTGCGGCCGTTCCGGTTCGCAAGGCCGGTTGTCGTCTCATCTAGCGAATGGCGAAGTGGCATTCGATGGCGCAATCG
ATCTAAATTGATGAGCGGTT

Downstream 100 bases:

>100_bases
CGGCTGGCCGCGCCCTCACTACCTCTTGCCCGGTTCGGCGCCGGTGCGGCGCTCTGGAGGCCGTGTTGTCCGTCGTCACA
TCCATCCGCAAGTCGCTGGT

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MPCRSLALERRMISAGFVDDALDCLVRRGIDPAPVLAQAGLAVPFGDAVSAEQYGALWLAVSQALDDEFFGLGGRPMRPG
SFTLLCHALMGAATLEQALRRALRFLKVVLDDPEGELQVAEGLAAIVLKDTGAARSAFAYRTYWIIVHGITCWLVGRRIP
LRQVDFRCGPPEHGADYRLFFGAPVRFDQPHSRLAFDAAFLTLPTTRGERALKEFLRGAPANILVRYRHDQGLAARVKAR
LRAVPATAWPGFEDLARQLRLPASTLRRRLADEGQTYRDIKDELRRVLAEALLREGAKPVGEIAAELGFSEPSAFHRAFR
KWTAQSPGAFRRVSGAAGHDEVAAGRI

Sequences:

>Translated_347_residues
MPCRSLALERRMISAGFVDDALDCLVRRGIDPAPVLAQAGLAVPFGDAVSAEQYGALWLAVSQALDDEFFGLGGRPMRPG
SFTLLCHALMGAATLEQALRRALRFLKVVLDDPEGELQVAEGLAAIVLKDTGAARSAFAYRTYWIIVHGITCWLVGRRIP
LRQVDFRCGPPEHGADYRLFFGAPVRFDQPHSRLAFDAAFLTLPTTRGERALKEFLRGAPANILVRYRHDQGLAARVKAR
LRAVPATAWPGFEDLARQLRLPASTLRRRLADEGQTYRDIKDELRRVLAEALLREGAKPVGEIAAELGFSEPSAFHRAFR
KWTAQSPGAFRRVSGAAGHDEVAAGRI
>Mature_346_residues
PCRSLALERRMISAGFVDDALDCLVRRGIDPAPVLAQAGLAVPFGDAVSAEQYGALWLAVSQALDDEFFGLGGRPMRPGS
FTLLCHALMGAATLEQALRRALRFLKVVLDDPEGELQVAEGLAAIVLKDTGAARSAFAYRTYWIIVHGITCWLVGRRIPL
RQVDFRCGPPEHGADYRLFFGAPVRFDQPHSRLAFDAAFLTLPTTRGERALKEFLRGAPANILVRYRHDQGLAARVKARL
RAVPATAWPGFEDLARQLRLPASTLRRRLADEGQTYRDIKDELRRVLAEALLREGAKPVGEIAAELGFSEPSAFHRAFRK
WTAQSPGAFRRVSGAAGHDEVAAGRI

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38134; Mature: 38003

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCRSLALERRMISAGFVDDALDCLVRRGIDPAPVLAQAGLAVPFGDAVSAEQYGALWLA
CCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHH
VSQALDDEFFGLGGRPMRPGSFTLLCHALMGAATLEQALRRALRFLKVVLDDPEGELQVA
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
EGLAAIVLKDTGAARSAFAYRTYWIIVHGITCWLVGRRIPLRQVDFRCGPPEHGADYRLF
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEEEE
FGAPVRFDQPHSRLAFDAAFLTLPTTRGERALKEFLRGAPANILVRYRHDQGLAARVKAR
ECCCCCCCCCCHHHHHHHHHEECCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH
LRAVPATAWPGFEDLARQLRLPASTLRRRLADEGQTYRDIKDELRRVLAEALLREGAKPV
HHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHH
GEIAAELGFSEPSAFHRAFRKWTAQSPGAFRRVSGAAGHDEVAAGRI
HHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
PCRSLALERRMISAGFVDDALDCLVRRGIDPAPVLAQAGLAVPFGDAVSAEQYGALWLA
CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHH
VSQALDDEFFGLGGRPMRPGSFTLLCHALMGAATLEQALRRALRFLKVVLDDPEGELQVA
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
EGLAAIVLKDTGAARSAFAYRTYWIIVHGITCWLVGRRIPLRQVDFRCGPPEHGADYRLF
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEEEE
FGAPVRFDQPHSRLAFDAAFLTLPTTRGERALKEFLRGAPANILVRYRHDQGLAARVKAR
ECCCCCCCCCCHHHHHHHHHEECCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH
LRAVPATAWPGFEDLARQLRLPASTLRRRLADEGQTYRDIKDELRRVLAEALLREGAKPV
HHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHH
GEIAAELGFSEPSAFHRAFRKWTAQSPGAFRRVSGAAGHDEVAAGRI
HHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]