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The map label for this gene is 154248560

Identifier: 154248560

GI number: 154248560

Start: 5130845

End: 5131627

Strand: Reverse

Name: 154248560

Synonym: Xaut_4641

Alternate gene names: NA

Gene position: 5131627-5130845 (Counterclockwise)

Preceding gene: 154248561

Following gene: 154248559

Centisome position: 96.66

GC content: 73.18

Gene sequence:

>783_bases
GTGAGCGCTGCGCCGGACTCCGCGACCGGGCGCGCGCGGCGGCCGGGCCGCGGCCTGGTGGTGCCCGCACTTGCCGCCCT
GGTGGCCTTCCTCATCCTGATCGGCCTCGGGACCTGGCAGCTGGAGCGCCTGGCGTGGAAGGAAGAGCTGCTCGCCCGCG
TGGACGCGCGTGTCCATGCCCCGCCCGCGCCTGTTCCGGCTCCGGAACTCTGGCCCAGGCTCAGCCGCGAGGCGGACGAG
TATCGCCGGGTTCGGGTGCGTGGCACCTTTGATCATGGGCGGGAAACCCTGGTCTATACGGTGCGCGGCGAGGATGCGGT
GGGTCCCGTGAAGGGGCAGGGCTATCTCGTTGTGACGCCGCTGCTGCGCCCGGACGGGCCGCCGATCCTGGTCAATCGCG
GCTTCGTCCCGTCCGACCGGCGCGATCCCGCCTCCCGCGCCGCCGGCCAGGTGGCGGGTGAGGTGGAGGTGGTGGGCCTG
CTGCGTCTGCCGGAGGAGGCGAGCTGGTTCGTGCCGGCCAACGATCCCGCCCATGAGAGCTTTTTCCGCATGGATCCCGC
TGGCATCTCCGCCGCCCGCGGCCTCACGGGCGCGGCGCCCTTCGTCATCGACGAGGAGGCGAATGCCGTGCCGGGCGGGC
TGCCCCTGTCCGGCGGCACGCGCCTCGCGTTTCCCAACCGTCATCTGGAATATGCGCTTACCTGGTACGGCCTCGCCGCT
GCCCTGGTGGGCGTGACGGCCGCCTTCCTGTGGACCCGGCGCCGCAGCGGGGGGCCGGGCTGA

Upstream 100 bases:

>100_bases
TCGTGGTGACGCTGGGACTGCTGCGCCCGTTCAAGGGCGTGATGGTGGCGCTGCAATACCGCAACAAGGCCGCCGAGGGG
CGGCTCGATTCGCACACGCC

Downstream 100 bases:

>100_bases
GACCGGGGCGTCATACGCTCCGCGGTGGAACAGGCGTTGCCCTTTTGCAACGGTGCGCCCGGCATCGCCGGCAAGCTCTT
GACGCAACAGGCCGTTAGCC

Product: Surfeit locus 1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSAAPDSATGRARRPGRGLVVPALAALVAFLILIGLGTWQLERLAWKEELLARVDARVHAPPAPVPAPELWPRLSREADE
YRRVRVRGTFDHGRETLVYTVRGEDAVGPVKGQGYLVVTPLLRPDGPPILVNRGFVPSDRRDPASRAAGQVAGEVEVVGL
LRLPEEASWFVPANDPAHESFFRMDPAGISAARGLTGAAPFVIDEEANAVPGGLPLSGGTRLAFPNRHLEYALTWYGLAA
ALVGVTAAFLWTRRRSGGPG

Sequences:

>Translated_260_residues
MSAAPDSATGRARRPGRGLVVPALAALVAFLILIGLGTWQLERLAWKEELLARVDARVHAPPAPVPAPELWPRLSREADE
YRRVRVRGTFDHGRETLVYTVRGEDAVGPVKGQGYLVVTPLLRPDGPPILVNRGFVPSDRRDPASRAAGQVAGEVEVVGL
LRLPEEASWFVPANDPAHESFFRMDPAGISAARGLTGAAPFVIDEEANAVPGGLPLSGGTRLAFPNRHLEYALTWYGLAA
ALVGVTAAFLWTRRRSGGPG
>Mature_259_residues
SAAPDSATGRARRPGRGLVVPALAALVAFLILIGLGTWQLERLAWKEELLARVDARVHAPPAPVPAPELWPRLSREADEY
RRVRVRGTFDHGRETLVYTVRGEDAVGPVKGQGYLVVTPLLRPDGPPILVNRGFVPSDRRDPASRAAGQVAGEVEVVGLL
RLPEEASWFVPANDPAHESFFRMDPAGISAARGLTGAAPFVIDEEANAVPGGLPLSGGTRLAFPNRHLEYALTWYGLAAA
LVGVTAAFLWTRRRSGGPG

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SURF1 family [H]

Homologues:

Organism=Homo sapiens, GI4507319, Length=239, Percent_Identity=41.0041841004184, Blast_Score=154, Evalue=7e-38,
Organism=Caenorhabditis elegans, GI17553856, Length=222, Percent_Identity=29.7297297297297, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6321550, Length=172, Percent_Identity=30.8139534883721, Blast_Score=77, Evalue=3e-15,
Organism=Drosophila melanogaster, GI17864366, Length=248, Percent_Identity=35.0806451612903, Blast_Score=111, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002994 [H]

Pfam domain/function: PF02104 SURF1 [H]

EC number: NA

Molecular weight: Translated: 27853; Mature: 27722

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAPDSATGRARRPGRGLVVPALAALVAFLILIGLGTWQLERLAWKEELLARVDARVHA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PPAPVPAPELWPRLSREADEYRRVRVRGTFDHGRETLVYTVRGEDAVGPVKGQGYLVVTP
CCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEEE
LLRPDGPPILVNRGFVPSDRRDPASRAAGQVAGEVEVVGLLRLPEEASWFVPANDPAHES
CCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCEEECCCCCCHHH
FFRMDPAGISAARGLTGAAPFVIDEEANAVPGGLPLSGGTRLAFPNRHLEYALTWYGLAA
HEECCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHH
ALVGVTAAFLWTRRRSGGPG
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SAAPDSATGRARRPGRGLVVPALAALVAFLILIGLGTWQLERLAWKEELLARVDARVHA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PPAPVPAPELWPRLSREADEYRRVRVRGTFDHGRETLVYTVRGEDAVGPVKGQGYLVVTP
CCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEEE
LLRPDGPPILVNRGFVPSDRRDPASRAAGQVAGEVEVVGLLRLPEEASWFVPANDPAHES
CCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCEEECCCCCCHHH
FFRMDPAGISAARGLTGAAPFVIDEEANAVPGGLPLSGGTRLAFPNRHLEYALTWYGLAA
HEECCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHH
ALVGVTAAFLWTRRRSGGPG
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA