Click here to switch to the map view.

The map label for this gene is nisX1 [H]

Identifier: 154248531

GI number: 154248531

Start: 5097064

End: 5097420

Strand: Reverse

Name: nisX1 [H]

Synonym: Xaut_4612

Alternate gene names: 154248531

Gene position: 5097420-5097064 (Counterclockwise)

Preceding gene: 154248532

Following gene: 154248530

Centisome position: 96.02

GC content: 60.22

Gene sequence:

>357_bases
TTGGGTCTTTATATCCGGCGAACAGGGAATTGTAAGTGGGCGGTGTCAGCTGCATGTGGCTATCCCACCCAGTTCACGAG
CGTGGAGTGGGCTTCGTTCCTGAAACACCACGATCTGCAGCCCTCGATGAGCCGTCGCGGCAACTGCCATGACAACGCCG
TCGCCGAGAGCTTCTTCAACCTGCTCAAGCGCGAACGCATCCGCCGCAAGGTCTACCGCACGCGGGATGAGGCACGCCGG
GACGTGTTCGATTACATCGAGATGTTCTACAACCCCACCCGGAAGCACGCACGGAACGGGATGCTGTCGCCCGTCGAGTT
CGAACGGCAGCACAAAGCCAAGGCCGAGGGTGTCTAG

Upstream 100 bases:

>100_bases
TTTCGAGCCGCAGCCTAGAAATCCTTGCCATTGCTTTCCCGCGTCAGGAGCTGGTCCGGGAGGAGCTCCGGGATCACGGG
CTGCTGGGAAACCACCCAGG

Downstream 100 bases:

>100_bases
AAAACTAGGGGCGGTTCAGACCATCGTCGACACCTTCACTCGGTTCTCGCCGGCGGTGGATCCCAGGTTCAGCTACCGGG
GCGAGGACGTCGTGCTGACG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MGLYIRRTGNCKWAVSAACGYPTQFTSVEWASFLKHHDLQPSMSRRGNCHDNAVAESFFNLLKRERIRRKVYRTRDEARR
DVFDYIEMFYNPTRKHARNGMLSPVEFERQHKAKAEGV

Sequences:

>Translated_118_residues
MGLYIRRTGNCKWAVSAACGYPTQFTSVEWASFLKHHDLQPSMSRRGNCHDNAVAESFFNLLKRERIRRKVYRTRDEARR
DVFDYIEMFYNPTRKHARNGMLSPVEFERQHKAKAEGV
>Mature_117_residues
GLYIRRTGNCKWAVSAACGYPTQFTSVEWASFLKHHDLQPSMSRRGNCHDNAVAESFFNLLKRERIRRKVYRTRDEARRD
VFDYIEMFYNPTRKHARNGMLSPVEFERQHKAKAEGV

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1788405, Length=90, Percent_Identity=44.4444444444444, Blast_Score=75, Evalue=1e-15,
Organism=Escherichia coli, GI1787263, Length=90, Percent_Identity=44.4444444444444, Blast_Score=75, Evalue=1e-15,
Organism=Escherichia coli, GI1786753, Length=90, Percent_Identity=44.4444444444444, Blast_Score=75, Evalue=1e-15,
Organism=Escherichia coli, GI1786570, Length=90, Percent_Identity=44.4444444444444, Blast_Score=75, Evalue=1e-15,
Organism=Escherichia coli, GI1786490, Length=90, Percent_Identity=44.4444444444444, Blast_Score=75, Evalue=1e-15,
Organism=Escherichia coli, GI1789981, Length=87, Percent_Identity=37.9310344827586, Blast_Score=59, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 13943; Mature: 13812

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLYIRRTGNCKWAVSAACGYPTQFTSVEWASFLKHHDLQPSMSRRGNCHDNAVAESFFN
CCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHH
LLKRERIRRKVYRTRDEARRDVFDYIEMFYNPTRKHARNGMLSPVEFERQHKAKAEGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
GLYIRRTGNCKWAVSAACGYPTQFTSVEWASFLKHHDLQPSMSRRGNCHDNAVAESFFN
CEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHH
LLKRERIRRKVYRTRDEARRDVFDYIEMFYNPTRKHARNGMLSPVEFERQHKAKAEGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]