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The map label for this gene is 154248526

Identifier: 154248526

GI number: 154248526

Start: 5093388

End: 5094005

Strand: Reverse

Name: 154248526

Synonym: Xaut_4606

Alternate gene names: NA

Gene position: 5094005-5093388 (Counterclockwise)

Preceding gene: 154248527

Following gene: 154248519

Centisome position: 95.95

GC content: 65.21

Gene sequence:

>618_bases
ATGAGCCACATCGATCGCATCGCACGGCTGAAGATCGAGCTCGATGACTGGCGGCCCGCCATCTGGCGCCGCGTCGAGGC
GCCGCTCGGCTCCTCGCTCAAAACCTTGCATGACGTCATCCAGGCCGTGATGCCGTTCGAGGACTGTCACCTGTTCGAGT
TCCGAGCTGACGGGCAACGCTTCGCCATCCCCGATCCGGAATGGGACAGCATGCGCGACAGGACCTACTCTGCCAGGGCC
ACGAAGCTCGGTGCCCTCATCGACCGCGGCATCACCAAGCTCACCTACACCTATGACTTCGGCGACGACTGGCGGCACAC
GATCACGATCGAGGCGACCGCAGCCGCCGATCCCGCCACGGACTACCCCCGCTATCTCGACGGTGCCCGCCGCGCGCCAC
CCGAGGACGTCGGCGGCATCACGGGCTTCGAGCTCTTCCTCGAGGCCATCGCCGATCCCGAACATGAGCAACATGACGAA
CTCATGCTCTGGCATGGTCGGACCTTCGATCCAAATCTCCTCGACGAGGACCGCATCCGCGCCCGCATCGCCAAGCTCGC
CCGACGCCGCGCCCAGGGCAAAGCCGCCTTCGCAAAAGGCCGAAGCCAGATGAGCTGA

Upstream 100 bases:

>100_bases
CCGACGTCCTCGCCCGCATCGCAGACACCCCGCAGAACCGGCTCTCCGAGCTCCTGCCCTGGAACTGGCGTGCGGCGTGT
CATCCCGGGAGTCTCGCGGC

Downstream 100 bases:

>100_bases
TCGCTCCGGATATCAGCGTGGCCTTAACCGGAGGCTTACTTAGCAAGGAGGGGCAACGTCAGTGTACATGCCAGCGTCCT
CCTTCATATCCCCGCGCTTC

Product: plasmid pRiA4b ORF-3 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSHIDRIARLKIELDDWRPAIWRRVEAPLGSSLKTLHDVIQAVMPFEDCHLFEFRADGQRFAIPDPEWDSMRDRTYSARA
TKLGALIDRGITKLTYTYDFGDDWRHTITIEATAAADPATDYPRYLDGARRAPPEDVGGITGFELFLEAIADPEHEQHDE
LMLWHGRTFDPNLLDEDRIRARIAKLARRRAQGKAAFAKGRSQMS

Sequences:

>Translated_205_residues
MSHIDRIARLKIELDDWRPAIWRRVEAPLGSSLKTLHDVIQAVMPFEDCHLFEFRADGQRFAIPDPEWDSMRDRTYSARA
TKLGALIDRGITKLTYTYDFGDDWRHTITIEATAAADPATDYPRYLDGARRAPPEDVGGITGFELFLEAIADPEHEQHDE
LMLWHGRTFDPNLLDEDRIRARIAKLARRRAQGKAAFAKGRSQMS
>Mature_204_residues
SHIDRIARLKIELDDWRPAIWRRVEAPLGSSLKTLHDVIQAVMPFEDCHLFEFRADGQRFAIPDPEWDSMRDRTYSARAT
KLGALIDRGITKLTYTYDFGDDWRHTITIEATAAADPATDYPRYLDGARRAPPEDVGGITGFELFLEAIADPEHEQHDEL
MLWHGRTFDPNLLDEDRIRARIAKLARRRAQGKAAFAKGRSQMS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.rhizogenes plasmid pRia4B ORF-3 in virA region [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012912 [H]

Pfam domain/function: PF07929 PRiA4_ORF3 [H]

EC number: NA

Molecular weight: Translated: 23521; Mature: 23390

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHIDRIARLKIELDDWRPAIWRRVEAPLGSSLKTLHDVIQAVMPFEDCHLFEFRADGQR
CCHHHHHHHEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCE
FAIPDPEWDSMRDRTYSARATKLGALIDRGITKLTYTYDFGDDWRHTITIEATAAADPAT
ECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEEECCCCCCC
DYPRYLDGARRAPPEDVGGITGFELFLEAIADPEHEQHDELMLWHGRTFDPNLLDEDRIR
CCHHHHHHCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHH
ARIAKLARRRAQGKAAFAKGRSQMS
HHHHHHHHHHHCCHHHHHHCCCCCC
>Mature Secondary Structure 
SHIDRIARLKIELDDWRPAIWRRVEAPLGSSLKTLHDVIQAVMPFEDCHLFEFRADGQR
CHHHHHHHEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCE
FAIPDPEWDSMRDRTYSARATKLGALIDRGITKLTYTYDFGDDWRHTITIEATAAADPAT
ECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEEECCCCCCC
DYPRYLDGARRAPPEDVGGITGFELFLEAIADPEHEQHDELMLWHGRTFDPNLLDEDRIR
CCHHHHHHCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHH
ARIAKLARRRAQGKAAFAKGRSQMS
HHHHHHHHHHHCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]