Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is 154248525

Identifier: 154248525

GI number: 154248525

Start: 5092515

End: 5093072

Strand: Direct

Name: 154248525

Synonym: Xaut_4605

Alternate gene names: NA

Gene position: 5092515-5093072 (Clockwise)

Preceding gene: 154248524

Following gene: 154248534

Centisome position: 95.92

GC content: 54.84

Gene sequence:

>558_bases
GTGGCGCGTCTGAGCCTTCTTGACTCCTCCCCCGAAGCGAACATTCCAACGGATCATGCTATGAAGCGCGCAGGCCTCTT
CCCTTTCGTGCTTTTGCTGAGCTTCGTGGTCGCTCCGGCGATGGCCAATTCGAACCTATCGTCTAGGATTGAAGATCGAA
TCGACCAATCAGATCGTACTGCGCTGTTGCGCAAAGCCGCCGATAGCCACCTCAGGTTTCTCTACGCTATGTATTTCGCG
ATCAAGGGGTGCACCGAGGCTGCGCAGGAATTCTCCAAGTCCGAACTCCTGCCCAGCGTCACCTTTGCTGAGGCGAAACG
CCTGCTCGCCAACGCAGACGCCGCCGCACGAGAAGTGGGCATCGACGTCGATCGCGTTTGGCTTGAGACCGTCCCGATGG
GACAAACCGTTGCTGAAGCGTTGAAGAAAGACACTTTGGATGCGCGCGAACAATGCCAGAAAACTGGGCGCTTCATTCGT
TTGATCGTTGCCAGACTCCAGAGCGTCTTGGTTGAACTCGGAGGGCATCTCCCAATTATTGAAAAAGATTTTCAATAA

Upstream 100 bases:

>100_bases
GGGCGACTCACCGTGACGAAGATCTCTAAAACTAAGTAAAGCTTCAGTAAGCTATGGCCCTTCGCCCTCGGGAACGGTGA
AACGCTCCCGAGGGCGGCGT

Downstream 100 bases:

>100_bases
TATTCACGTAGCCTGGGTTGACGATCTAGAGCGTGACCTGAGCCCTGCAAACTGGACCGTTTGAAGTTGGAGTTTCCTGC
CCTGCACCCTTGGCTGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MARLSLLDSSPEANIPTDHAMKRAGLFPFVLLLSFVVAPAMANSNLSSRIEDRIDQSDRTALLRKAADSHLRFLYAMYFA
IKGCTEAAQEFSKSELLPSVTFAEAKRLLANADAAAREVGIDVDRVWLETVPMGQTVAEALKKDTLDAREQCQKTGRFIR
LIVARLQSVLVELGGHLPIIEKDFQ

Sequences:

>Translated_185_residues
MARLSLLDSSPEANIPTDHAMKRAGLFPFVLLLSFVVAPAMANSNLSSRIEDRIDQSDRTALLRKAADSHLRFLYAMYFA
IKGCTEAAQEFSKSELLPSVTFAEAKRLLANADAAAREVGIDVDRVWLETVPMGQTVAEALKKDTLDAREQCQKTGRFIR
LIVARLQSVLVELGGHLPIIEKDFQ
>Mature_184_residues
ARLSLLDSSPEANIPTDHAMKRAGLFPFVLLLSFVVAPAMANSNLSSRIEDRIDQSDRTALLRKAADSHLRFLYAMYFAI
KGCTEAAQEFSKSELLPSVTFAEAKRLLANADAAAREVGIDVDRVWLETVPMGQTVAEALKKDTLDAREQCQKTGRFIRL
IVARLQSVLVELGGHLPIIEKDFQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20474; Mature: 20343

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLSLLDSSPEANIPTDHAMKRAGLFPFVLLLSFVVAPAMANSNLSSRIEDRIDQSDRT
CCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHH
ALLRKAADSHLRFLYAMYFAIKGCTEAAQEFSKSELLPSVTFAEAKRLLANADAAAREVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHC
IDVDRVWLETVPMGQTVAEALKKDTLDAREQCQKTGRFIRLIVARLQSVLVELGGHLPII
CCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EKDFQ
CCCCC
>Mature Secondary Structure 
ARLSLLDSSPEANIPTDHAMKRAGLFPFVLLLSFVVAPAMANSNLSSRIEDRIDQSDRT
CCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHH
ALLRKAADSHLRFLYAMYFAIKGCTEAAQEFSKSELLPSVTFAEAKRLLANADAAAREVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHC
IDVDRVWLETVPMGQTVAEALKKDTLDAREQCQKTGRFIRLIVARLQSVLVELGGHLPII
CCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EKDFQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA