| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154248525
Identifier: 154248525
GI number: 154248525
Start: 5092515
End: 5093072
Strand: Direct
Name: 154248525
Synonym: Xaut_4605
Alternate gene names: NA
Gene position: 5092515-5093072 (Clockwise)
Preceding gene: 154248524
Following gene: 154248534
Centisome position: 95.92
GC content: 54.84
Gene sequence:
>558_bases GTGGCGCGTCTGAGCCTTCTTGACTCCTCCCCCGAAGCGAACATTCCAACGGATCATGCTATGAAGCGCGCAGGCCTCTT CCCTTTCGTGCTTTTGCTGAGCTTCGTGGTCGCTCCGGCGATGGCCAATTCGAACCTATCGTCTAGGATTGAAGATCGAA TCGACCAATCAGATCGTACTGCGCTGTTGCGCAAAGCCGCCGATAGCCACCTCAGGTTTCTCTACGCTATGTATTTCGCG ATCAAGGGGTGCACCGAGGCTGCGCAGGAATTCTCCAAGTCCGAACTCCTGCCCAGCGTCACCTTTGCTGAGGCGAAACG CCTGCTCGCCAACGCAGACGCCGCCGCACGAGAAGTGGGCATCGACGTCGATCGCGTTTGGCTTGAGACCGTCCCGATGG GACAAACCGTTGCTGAAGCGTTGAAGAAAGACACTTTGGATGCGCGCGAACAATGCCAGAAAACTGGGCGCTTCATTCGT TTGATCGTTGCCAGACTCCAGAGCGTCTTGGTTGAACTCGGAGGGCATCTCCCAATTATTGAAAAAGATTTTCAATAA
Upstream 100 bases:
>100_bases GGGCGACTCACCGTGACGAAGATCTCTAAAACTAAGTAAAGCTTCAGTAAGCTATGGCCCTTCGCCCTCGGGAACGGTGA AACGCTCCCGAGGGCGGCGT
Downstream 100 bases:
>100_bases TATTCACGTAGCCTGGGTTGACGATCTAGAGCGTGACCTGAGCCCTGCAAACTGGACCGTTTGAAGTTGGAGTTTCCTGC CCTGCACCCTTGGCTGGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MARLSLLDSSPEANIPTDHAMKRAGLFPFVLLLSFVVAPAMANSNLSSRIEDRIDQSDRTALLRKAADSHLRFLYAMYFA IKGCTEAAQEFSKSELLPSVTFAEAKRLLANADAAAREVGIDVDRVWLETVPMGQTVAEALKKDTLDAREQCQKTGRFIR LIVARLQSVLVELGGHLPIIEKDFQ
Sequences:
>Translated_185_residues MARLSLLDSSPEANIPTDHAMKRAGLFPFVLLLSFVVAPAMANSNLSSRIEDRIDQSDRTALLRKAADSHLRFLYAMYFA IKGCTEAAQEFSKSELLPSVTFAEAKRLLANADAAAREVGIDVDRVWLETVPMGQTVAEALKKDTLDAREQCQKTGRFIR LIVARLQSVLVELGGHLPIIEKDFQ >Mature_184_residues ARLSLLDSSPEANIPTDHAMKRAGLFPFVLLLSFVVAPAMANSNLSSRIEDRIDQSDRTALLRKAADSHLRFLYAMYFAI KGCTEAAQEFSKSELLPSVTFAEAKRLLANADAAAREVGIDVDRVWLETVPMGQTVAEALKKDTLDAREQCQKTGRFIRL IVARLQSVLVELGGHLPIIEKDFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20474; Mature: 20343
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLSLLDSSPEANIPTDHAMKRAGLFPFVLLLSFVVAPAMANSNLSSRIEDRIDQSDRT CCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHH ALLRKAADSHLRFLYAMYFAIKGCTEAAQEFSKSELLPSVTFAEAKRLLANADAAAREVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHC IDVDRVWLETVPMGQTVAEALKKDTLDAREQCQKTGRFIRLIVARLQSVLVELGGHLPII CCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EKDFQ CCCCC >Mature Secondary Structure ARLSLLDSSPEANIPTDHAMKRAGLFPFVLLLSFVVAPAMANSNLSSRIEDRIDQSDRT CCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHH ALLRKAADSHLRFLYAMYFAIKGCTEAAQEFSKSELLPSVTFAEAKRLLANADAAAREVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHC IDVDRVWLETVPMGQTVAEALKKDTLDAREQCQKTGRFIRLIVARLQSVLVELGGHLPII CCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EKDFQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA