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The map label for this gene is stbB [H]

Identifier: 154248494

GI number: 154248494

Start: 5056219

End: 5056662

Strand: Direct

Name: stbB [H]

Synonym: Xaut_4574

Alternate gene names: 154248494

Gene position: 5056219-5056662 (Clockwise)

Preceding gene: 154248493

Following gene: 154248495

Centisome position: 95.24

GC content: 61.71

Gene sequence:

>444_bases
GTGACGCGCTATCTCCTCGATACCAACATCATCAGCAATATCGTCAAGCCGCAGCCGTCGGCGTCGTTGCTGGCTTGGAT
GGCAACACAGCGCGACGAGGACCTGTTTATTGCGTCATTGACCGTCGCTGAAATTCGACGTGGCATTCTGGAAAAGCCCC
GCGGCAAGAAACGCGATGCGCTCGACGCCTGGTTTGTCGGGCCGGAGGGGCCGCAGGCCCTGTTCACGGGCCGCATTTTA
TCCTTCGACGCCAAGGCCGGCCTGATCTGGGCGCGGCTGATGGCGGAGGGCAAGGTGGCGGGTCGTCCCCGTAGCGGACT
CGACATGATCATCGCCGCCGTCGCCGGTGCGAATGAATGCGTCGTGGTGACTGACAACGAGAAGGACTTCGCCGGGCTCC
AGATCATCAATCCGTTGCGTGGCGGCCTGGAGGGGGAAAAATGA

Upstream 100 bases:

>100_bases
CCAAGCCCGGCGGCATCCTCACCGCTTTACGCCGCTCGCCGCTGGTGGGCGCGGAGCTTGATCTTTCCCGCCCGCGTGAA
GAGGGGCGTAAGGTCGATCT

Downstream 100 bases:

>100_bases
AGATGGCGCCGCCGCCTGTACCCATCGAGTACCAGCTCATCGGTCTGACCGAAGACGGCAATGCTGGAGATCTCCTGCTT
GGGCTTGACCAGAAACAGGG

Product: PilT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MTRYLLDTNIISNIVKPQPSASLLAWMATQRDEDLFIASLTVAEIRRGILEKPRGKKRDALDAWFVGPEGPQALFTGRIL
SFDAKAGLIWARLMAEGKVAGRPRSGLDMIIAAVAGANECVVVTDNEKDFAGLQIINPLRGGLEGEK

Sequences:

>Translated_147_residues
MTRYLLDTNIISNIVKPQPSASLLAWMATQRDEDLFIASLTVAEIRRGILEKPRGKKRDALDAWFVGPEGPQALFTGRIL
SFDAKAGLIWARLMAEGKVAGRPRSGLDMIIAAVAGANECVVVTDNEKDFAGLQIINPLRGGLEGEK
>Mature_146_residues
TRYLLDTNIISNIVKPQPSASLLAWMATQRDEDLFIASLTVAEIRRGILEKPRGKKRDALDAWFVGPEGPQALFTGRILS
FDAKAGLIWARLMAEGKVAGRPRSGLDMIIAAVAGANECVVVTDNEKDFAGLQIINPLRGGLEGEK

Specific function: Involved in plasmid stability [H]

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 15977; Mature: 15846

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRYLLDTNIISNIVKPQPSASLLAWMATQRDEDLFIASLTVAEIRRGILEKPRGKKRDA
CCEEEECHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCC
LDAWFVGPEGPQALFTGRILSFDAKAGLIWARLMAEGKVAGRPRSGLDMIIAAVAGANEC
CEEEEECCCCCCCEEECEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCE
VVVTDNEKDFAGLQIINPLRGGLEGEK
EEEECCCCCCCHHEEECHHHCCCCCCC
>Mature Secondary Structure 
TRYLLDTNIISNIVKPQPSASLLAWMATQRDEDLFIASLTVAEIRRGILEKPRGKKRDA
CEEEECHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCC
LDAWFVGPEGPQALFTGRILSFDAKAGLIWARLMAEGKVAGRPRSGLDMIIAAVAGANEC
CEEEEECCCCCCCEEECEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCE
VVVTDNEKDFAGLQIINPLRGGLEGEK
EEEECCCCCCCHHEEECHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9326365; 12928499 [H]